RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 GABPAQ06546 454 aa16.96■□□□□ 0.31
PDE6D-204ENST00000477748 CHD1LQ86WJ1 897 aa16.96■□□□□ 0.31
PDE6D-204ENST00000477748 NKX2-3Q8TAU0 364 aa16.96■□□□□ 0.31
PDE6D-204ENST00000477748 CABP5Q9NP86 173 aa16.96■□□□□ 0.31
PDE6D-204ENST00000477748 TMOD4Q9NZQ9 345 aa16.96■□□□□ 0.31
PDE6D-204ENST00000477748 USP17L12C9JPN9 530 aa16.95■□□□□ 0.3
PDE6D-204ENST00000477748 USP17L21D6R901 530 aa16.95■□□□□ 0.3
PDE6D-204ENST00000477748 MYCP01106 439 aaPredicted RBP16.95■□□□□ 0.3
PDE6D-204ENST00000477748 HOXD11P31277 338 aaPredicted RBP16.95■□□□□ 0.3
PDE6D-204ENST00000477748 UBXN2AP68543 259 aa16.95■□□□□ 0.3
PDE6D-204ENST00000477748 NUCB1Q02818 461 aa16.95■□□□□ 0.3
PDE6D-204ENST00000477748 MTMR2Q13614 643 aa16.95■□□□□ 0.3
PDE6D-204ENST00000477748 ABCB5Q2M3G0 1257 aa16.95■□□□□ 0.3
PDE6D-204ENST00000477748 ANKRD13CQ8N6S4 541 aa16.95■□□□□ 0.3
PDE6D-204ENST00000477748 CYP2D7A0A087X1C5 515 aa16.94■□□□□ 0.3
PDE6D-204ENST00000477748 C19orf81C9J6K1 198 aa16.94■□□□□ 0.3
PDE6D-204ENST00000477748 USP17L10C9JJH3 530 aa16.94■□□□□ 0.3
PDE6D-204ENST00000477748 M0R2C6 588 aa16.94■□□□□ 0.3
PDE6D-204ENST00000477748 GPAA1O43292 621 aa16.94■□□□□ 0.3
PDE6D-204ENST00000477748 IRF5Q13568 498 aa16.94■□□□□ 0.3
PDE6D-204ENST00000477748 RAB3GAP1Q15042 981 aa16.94■□□□□ 0.3
PDE6D-204ENST00000477748 C12orf60Q5U649 245 aa16.94■□□□□ 0.3
PDE6D-204ENST00000477748 COA7Q96BR5 231 aa16.94■□□□□ 0.3
PDE6D-204ENST00000477748 EVI5LQ96CN4 794 aa16.94■□□□□ 0.3
PDE6D-204ENST00000477748 DYNLL2Q96FJ2 89 aa16.94■□□□□ 0.3
PDE6D-204ENST00000477748 ASCC2Q9H1I8 757 aaPredicted RBP16.94■□□□□ 0.3
PDE6D-204ENST00000477748 BIN2Q9UBW5 565 aaPredicted RBP16.94■□□□□ 0.3
PDE6D-204ENST00000477748 SWAP70Q9UH65 585 aa16.94■□□□□ 0.3
PDE6D-204ENST00000477748 GNAT2P19087 354 aa16.93■□□□□ 0.3
PDE6D-204ENST00000477748 FLT3LGP49771 235 aa16.93■□□□□ 0.3
PDE6D-204ENST00000477748 FXR1P51114 621 aaKnown RBP eCLIP16.93■□□□□ 0.3
PDE6D-204ENST00000477748 IRX3P78415 501 aaPredicted RBP16.93■□□□□ 0.3
PDE6D-204ENST00000477748 MTFR1Q15390 333 aa16.93■□□□□ 0.3
PDE6D-204ENST00000477748 CTR9Q6PD62 1173 aa16.93■□□□□ 0.3
PDE6D-204ENST00000477748 SLC44A5Q8NCS7 719 aa16.93■□□□□ 0.3
PDE6D-204ENST00000477748 PXYLP1Q8TE99 480 aa16.93■□□□□ 0.3
PDE6D-204ENST00000477748 SEC62Q99442 399 aaKnown RBP16.93■□□□□ 0.3
PDE6D-204ENST00000477748 ARPP21Q9UBL0 812 aaPredicted RBP16.93■□□□□ 0.3
PDE6D-204ENST00000477748 TAOK2Q9UL54 1235 aa16.93■□□□□ 0.3
PDE6D-204ENST00000477748 GSG1L2A8MUP6 293 aa16.92■□□□□ 0.3
PDE6D-204ENST00000477748 MPHOSPH10O00566 681 aaKnown RBP16.92■□□□□ 0.3
PDE6D-204ENST00000477748 ADCY3O60266 1144 aa16.92■□□□□ 0.3
PDE6D-204ENST00000477748 APPP05067 770 aa16.92■□□□□ 0.3
PDE6D-204ENST00000477748 GJB1P08034 283 aa16.92■□□□□ 0.3
PDE6D-204ENST00000477748 CCL5P13501 91 aa16.92■□□□□ 0.3
PDE6D-204ENST00000477748 HOXA7P31268 230 aaPredicted RBP16.92■□□□□ 0.3
PDE6D-204ENST00000477748 ZMYM1Q5SVZ6 1142 aa16.92■□□□□ 0.3
PDE6D-204ENST00000477748 GIMAP6Q6P9H5 292 aa16.92■□□□□ 0.3
PDE6D-204ENST00000477748 FEZ1Q99689 392 aa16.92■□□□□ 0.3
PDE6D-204ENST00000477748 GABRQQ9UN88 632 aa16.92■□□□□ 0.3
PDE6D-204ENST00000477748 MGAMO43451 1857 aa16.92■□□□□ 0.3
PDE6D-204ENST00000477748 TRIM6-TRIM34B2RNG4 842 aa16.91■□□□□ 0.3
PDE6D-204ENST00000477748 SMIM22K7EJ46 135 aa16.91■□□□□ 0.3
PDE6D-204ENST00000477748 CAPN2P17655 700 aa16.91■□□□□ 0.3
PDE6D-204ENST00000477748 GJA8P48165 433 aa16.91■□□□□ 0.3
PDE6D-204ENST00000477748 CDK8P49336 464 aa16.91■□□□□ 0.3
PDE6D-204ENST00000477748 SEPT2Q15019 361 aa16.91■□□□□ 0.3
PDE6D-204ENST00000477748 USP17L2Q6R6M4 530 aa16.91■□□□□ 0.3
PDE6D-204ENST00000477748 PLEKHM2Q8IWE5 1019 aa16.91■□□□□ 0.3
PDE6D-204ENST00000477748 GTF3C2Q8WUA4 911 aaPredicted RBP16.91■□□□□ 0.3
PDE6D-204ENST00000477748 RNF208Q9H0X6 261 aa16.91■□□□□ 0.3
PDE6D-204ENST00000477748 MORF4L1Q9UBU8 362 aa16.91■□□□□ 0.3
PDE6D-204ENST00000477748 MINDY4BA8MYZ0 360 aa16.9■□□□□ 0.3
PDE6D-204ENST00000477748 PATL2C9JE40 543 aaKnown RBP16.9■□□□□ 0.3
PDE6D-204ENST00000477748 GUCY1A2P33402 732 aa16.9■□□□□ 0.3
PDE6D-204ENST00000477748 TDO2P48775 406 aa16.9■□□□□ 0.3
PDE6D-204ENST00000477748 ZYXQ15942 572 aaKnown RBP16.9■□□□□ 0.3
PDE6D-204ENST00000477748 SBK1Q52WX2 424 aa16.9■□□□□ 0.3
PDE6D-204ENST00000477748 C16orf86Q6ZW13 317 aa16.9■□□□□ 0.3
PDE6D-204ENST00000477748 SHISA4Q96DD7 197 aa16.9■□□□□ 0.3
PDE6D-204ENST00000477748 INHAP05111 366 aa16.89■□□□□ 0.29
PDE6D-204ENST00000477748 AKR1B1P15121 316 aa16.89■□□□□ 0.29
PDE6D-204ENST00000477748 TMEM179Q6ZVK1 233 aa16.89■□□□□ 0.29
PDE6D-204ENST00000477748 ACER1Q8TDN7 264 aa16.89■□□□□ 0.29
PDE6D-204ENST00000477748 RILPL2Q969X0 211 aa16.89■□□□□ 0.29
PDE6D-204ENST00000477748 CCDC17Q96LX7 622 aa16.89■□□□□ 0.29
PDE6D-204ENST00000477748 NACAP1Q9BZK3 213 aa16.89■□□□□ 0.29
PDE6D-204ENST00000477748 OSBPL3Q9H4L5 887 aa16.89■□□□□ 0.29
PDE6D-204ENST00000477748 EPB41L4AQ9HCS5 686 aaPredicted RBP16.89■□□□□ 0.29
PDE6D-204ENST00000477748 EMILIN3Q9NT22 766 aa16.89■□□□□ 0.29
PDE6D-204ENST00000477748 ELNP15502 786 aa16.88■□□□□ 0.29
PDE6D-204ENST00000477748 USP14P54578 494 aa16.88■□□□□ 0.29
PDE6D-204ENST00000477748 HERVK_113P62684 666 aa16.88■□□□□ 0.29
PDE6D-204ENST00000477748 CCDC129Q6ZRS4 1044 aa16.88■□□□□ 0.29
PDE6D-204ENST00000477748 IFNL3Q8IZI9 196 aa16.88■□□□□ 0.29
PDE6D-204ENST00000477748 STK11IPQ8N1F8 1099 aa16.88■□□□□ 0.29
PDE6D-204ENST00000477748 C12orf42Q96LP6 360 aa16.88■□□□□ 0.29
PDE6D-204ENST00000477748 GPRC5AQ8NFJ5 357 aa16.87■□□□□ 0.29
PDE6D-204ENST00000477748 U2AF1L4Q8WU68 220 aaKnown RBP16.87■□□□□ 0.29
PDE6D-204ENST00000477748 P2RX7Q99572 595 aaKnown RBP16.87■□□□□ 0.29
PDE6D-204ENST00000477748 KIAA1683Q9H0B3 1180 aa16.87■□□□□ 0.29
PDE6D-204ENST00000477748 UNC93B1Q9H1C4 597 aa16.87■□□□□ 0.29
PDE6D-204ENST00000477748 HELLSQ9NRZ9 838 aa16.87■□□□□ 0.29
PDE6D-204ENST00000477748 HMGCRP04035 888 aa16.86■□□□□ 0.29
PDE6D-204ENST00000477748 TICAM2Q86XR7 235 aa16.86■□□□□ 0.29
PDE6D-204ENST00000477748 SOCS4Q8WXH5 440 aa16.86■□□□□ 0.29
PDE6D-204ENST00000477748 NAPBQ9H115 298 aa16.86■□□□□ 0.29
PDE6D-204ENST00000477748 MKNK2Q9HBH9 465 aa16.86■□□□□ 0.29
PDE6D-204ENST00000477748 RANBP2P49792 3224 aaKnown RBP16.86■□□□□ 0.29
PDE6D-204ENST00000477748 A0A1W2PRG0 241 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms