RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 OTUD7BQ6GQQ9 843 aa8.04□□□□□ -1.12
LINC00173-202ENST00000477702 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.04□□□□□ -1.12
LINC00173-202ENST00000477702 HOMEZQ8IX15 550 aa8.04□□□□□ -1.12
LINC00173-202ENST00000477702 HTATIP2Q9BUP3 242 aa8.04□□□□□ -1.12
LINC00173-202ENST00000477702 ARHGAP39Q9C0H5 1083 aa8.04□□□□□ -1.12
LINC00173-202ENST00000477702 PRDM6Q9NQX0 595 aa8.04□□□□□ -1.12
LINC00173-202ENST00000477702 VCANP13611 3396 aa8.03□□□□□ -1.12
LINC00173-202ENST00000477702 A0A1W2PPC1 479 aa8.03□□□□□ -1.12
LINC00173-202ENST00000477702 SOBPA7XYQ1 873 aa8.03□□□□□ -1.12
LINC00173-202ENST00000477702 PRMT3O60678 531 aa8.03□□□□□ -1.12
LINC00173-202ENST00000477702 EIF2S2P20042 333 aaKnown RBP8.03□□□□□ -1.12
LINC00173-202ENST00000477702 SCNN1AP37088 669 aa8.03□□□□□ -1.12
LINC00173-202ENST00000477702 RPS8P62241 208 aaKnown RBP8.03□□□□□ -1.12
LINC00173-202ENST00000477702 AIMP1Q12904 312 aaKnown RBP8.03□□□□□ -1.12
LINC00173-202ENST00000477702 ARHGEF6Q15052 776 aa8.03□□□□□ -1.12
LINC00173-202ENST00000477702 LRP10Q7Z4F1 713 aa8.03□□□□□ -1.12
LINC00173-202ENST00000477702 FAM89AQ96GI7 184 aa8.03□□□□□ -1.12
LINC00173-202ENST00000477702 TSPAN10Q9H1Z9 355 aaPredicted RBP8.03□□□□□ -1.12
LINC00173-202ENST00000477702 GGA1Q9UJY5 639 aa8.03□□□□□ -1.12
LINC00173-202ENST00000477702 A6NJY4 79 aa8.02□□□□□ -1.13
LINC00173-202ENST00000477702 BACH1O14867 736 aa8.02□□□□□ -1.13
LINC00173-202ENST00000477702 HSPA5P11021 654 aaKnown RBP8.02□□□□□ -1.13
LINC00173-202ENST00000477702 TAF1CQ15572 869 aaPredicted RBP8.02□□□□□ -1.13
LINC00173-202ENST00000477702 UBE2Q1Q7Z7E8 422 aa8.02□□□□□ -1.13
LINC00173-202ENST00000477702 RNF217Q8TC41 542 aa8.02□□□□□ -1.13
LINC00173-202ENST00000477702 MTMR10Q9NXD2 777 aa8.02□□□□□ -1.13
LINC00173-202ENST00000477702 GMPR2Q9P2T1 348 aaKnown RBP8.02□□□□□ -1.13
LINC00173-202ENST00000477702 RAPGEFL1Q9UHV5 662 aa8.02□□□□□ -1.13
LINC00173-202ENST00000477702 SPTBN5Q9NRC6 3674 aaKnown RBP8.01□□□□□ -1.13
LINC00173-202ENST00000477702 M0R2N6 131 aa8.01□□□□□ -1.13
LINC00173-202ENST00000477702 PPP1R12BO60237 982 aaPredicted RBP8.01□□□□□ -1.13
LINC00173-202ENST00000477702 FARP2O94887 1054 aaPredicted RBP8.01□□□□□ -1.13
LINC00173-202ENST00000477702 U2AF1L5P0DN76 240 aaPredicted RBP8.01□□□□□ -1.13
LINC00173-202ENST00000477702 RNF144AP50876 292 aaPredicted RBP8.01□□□□□ -1.13
LINC00173-202ENST00000477702 U2AF1Q01081 240 aaKnown RBP eCLIP8.01□□□□□ -1.13
LINC00173-202ENST00000477702 FOXK2Q01167 660 aa8.01□□□□□ -1.13
LINC00173-202ENST00000477702 SF3B3Q15393 1217 aaKnown RBP8.01□□□□□ -1.13
LINC00173-202ENST00000477702 HSP90AB3PQ58FF7 597 aa8.01□□□□□ -1.13
LINC00173-202ENST00000477702 DACT2Q5SW24 774 aa8.01□□□□□ -1.13
LINC00173-202ENST00000477702 COPS6Q7L5N1 327 aa8.01□□□□□ -1.13
LINC00173-202ENST00000477702 PRICKLE2Q7Z3G6 844 aa8.01□□□□□ -1.13
LINC00173-202ENST00000477702 APOBEC3FQ8IUX4 373 aaKnown RBP8.01□□□□□ -1.13
LINC00173-202ENST00000477702 SLC9A9Q8IVB4 645 aa8.01□□□□□ -1.13
LINC00173-202ENST00000477702 XAGE3Q8WTP9 111 aa8.01□□□□□ -1.13
LINC00173-202ENST00000477702 GRIP2Q9C0E4 1043 aa8.01□□□□□ -1.13
LINC00173-202ENST00000477702 DEFB129Q9H1M3 183 aa8.01□□□□□ -1.13
LINC00173-202ENST00000477702 ZFYVE28Q9HCC9 887 aa8.01□□□□□ -1.13
LINC00173-202ENST00000477702 SEC31BQ9NQW1 1179 aa8.01□□□□□ -1.13
LINC00173-202ENST00000477702 PODXL2Q9NZ53 605 aa8.01□□□□□ -1.13
LINC00173-202ENST00000477702 SCHIP1Q9P0W5 487 aaPredicted RBP8.01□□□□□ -1.13
LINC00173-202ENST00000477702 IQSEC3Q9UPP2 1182 aaPredicted RBP8.01□□□□□ -1.13
LINC00173-202ENST00000477702 ZSWIM8A7E2V4 1837 aa8.01□□□□□ -1.13
LINC00173-202ENST00000477702 SSC5DA1L4H1 1573 aa8.01□□□□□ -1.13
LINC00173-202ENST00000477702 TTLL8A6PVC2 850 aa8□□□□□ -1.13
LINC00173-202ENST00000477702 HTATSF1O43719 755 aaKnown RBP8□□□□□ -1.13
LINC00173-202ENST00000477702 CCL5P13501 91 aa8□□□□□ -1.13
LINC00173-202ENST00000477702 RHOQP17081 205 aa8□□□□□ -1.13
LINC00173-202ENST00000477702 OCLNQ16625 522 aa8□□□□□ -1.13
LINC00173-202ENST00000477702 PNISRQ8TF01 805 aaKnown RBP8□□□□□ -1.13
LINC00173-202ENST00000477702 SCG3Q8WXD2 468 aaKnown RBP8□□□□□ -1.13
LINC00173-202ENST00000477702 BRI3BPQ8WY22 251 aa8□□□□□ -1.13
LINC00173-202ENST00000477702 CLP1Q92989 425 aaKnown RBP8□□□□□ -1.13
LINC00173-202ENST00000477702 OPTNQ96CV9 577 aa8□□□□□ -1.13
LINC00173-202ENST00000477702 ZSCAN10Q96SZ4 725 aaPredicted RBP8□□□□□ -1.13
LINC00173-202ENST00000477702 ELP3Q9H9T3 547 aa8□□□□□ -1.13
LINC00173-202ENST00000477702 BIN2Q9UBW5 565 aaPredicted RBP8□□□□□ -1.13
LINC00173-202ENST00000477702 DNMT3LQ9UJW3 386 aa8□□□□□ -1.13
LINC00173-202ENST00000477702 USTQ9Y2C2 406 aa8□□□□□ -1.13
LINC00173-202ENST00000477702 ERBB4Q15303 1308 aa8□□□□□ -1.13
LINC00173-202ENST00000477702 CCL15-CCL14A0A0B4J2E2 113 aa7.99□□□□□ -1.13
LINC00173-202ENST00000477702 USP2O75604 605 aaPredicted RBP7.99□□□□□ -1.13
LINC00173-202ENST00000477702 GJB1P08034 283 aa7.99□□□□□ -1.13
LINC00173-202ENST00000477702 PHKA2P46019 1235 aa7.99□□□□□ -1.13
LINC00173-202ENST00000477702 GJA8P48165 433 aa7.99□□□□□ -1.13
LINC00173-202ENST00000477702 POU4F2Q12837 409 aa7.99□□□□□ -1.13
LINC00173-202ENST00000477702 KIF22Q14807 665 aa7.99□□□□□ -1.13
LINC00173-202ENST00000477702 MAP3K11Q16584 847 aa7.99□□□□□ -1.13
LINC00173-202ENST00000477702 CCL15Q16663 113 aa7.99□□□□□ -1.13
LINC00173-202ENST00000477702 SWI5Q1ZZU3 235 aa7.99□□□□□ -1.13
LINC00173-202ENST00000477702 NBPF12Q5TAG4 269 aaPredicted RBP7.99□□□□□ -1.13
LINC00173-202ENST00000477702 SH3PXD2AQ5TCZ1 1133 aa7.99□□□□□ -1.13
LINC00173-202ENST00000477702 PHLDB3Q6NSJ2 640 aa7.99□□□□□ -1.13
LINC00173-202ENST00000477702 PODNQ7Z5L7 613 aa7.99□□□□□ -1.13
LINC00173-202ENST00000477702 KIAA0825Q8IV33 1275 aa7.99□□□□□ -1.13
LINC00173-202ENST00000477702 ZNF295-AS1Q8N0V1 137 aa7.99□□□□□ -1.13
LINC00173-202ENST00000477702 FAM43AQ8N2R8 423 aa7.99□□□□□ -1.13
LINC00173-202ENST00000477702 RNF208Q9H0X6 261 aa7.99□□□□□ -1.13
LINC00173-202ENST00000477702 ZMYND8Q9ULU4 1186 aaPredicted RBP7.99□□□□□ -1.13
LINC00173-202ENST00000477702 PSME4Q14997 1843 aa7.99□□□□□ -1.13
LINC00173-202ENST00000477702 CLRN2A0PK11 232 aa7.98□□□□□ -1.13
LINC00173-202ENST00000477702 CDK2AP1O14519 115 aa7.98□□□□□ -1.13
LINC00173-202ENST00000477702 IRS4O14654 1257 aaPredicted RBP7.98□□□□□ -1.13
LINC00173-202ENST00000477702 SNRPBP14678 240 aaKnown RBP7.98□□□□□ -1.13
LINC00173-202ENST00000477702 ATP2B4P23634 1241 aa7.98□□□□□ -1.13
LINC00173-202ENST00000477702 WEE1P30291 646 aa7.98□□□□□ -1.13
LINC00173-202ENST00000477702 IREB2P48200 963 aaKnown RBP7.98□□□□□ -1.13
LINC00173-202ENST00000477702 LACTBP83111 547 aaPredicted RBP7.98□□□□□ -1.13
LINC00173-202ENST00000477702 TMEM214Q6NUQ4 689 aaKnown RBP7.98□□□□□ -1.13
LINC00173-202ENST00000477702 CAPN12Q6ZSI9 719 aa7.98□□□□□ -1.13
LINC00173-202ENST00000477702 ZDHHC1Q8WTX9 485 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms