RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 TMTC3Q6ZXV5 915 aa23.75■■□□□ 1.39
ITGA4-207ENST00000476089 OGFOD1Q8N543 542 aa23.75■■□□□ 1.39
ITGA4-207ENST00000476089 PCDHAC2Q9Y5I4 1007 aa23.75■■□□□ 1.39
ITGA4-207ENST00000476089 GOLGA6L3A6NEY3 463 aa23.74■■□□□ 1.39
ITGA4-207ENST00000476089 NPM3O75607 178 aaKnown RBP23.74■■□□□ 1.39
ITGA4-207ENST00000476089 XBP1P17861 261 aa23.74■■□□□ 1.39
ITGA4-207ENST00000476089 KIF23Q02241 960 aaPredicted RBP23.74■■□□□ 1.39
ITGA4-207ENST00000476089 SAFBQ15424 915 aaKnown RBP eCLIP23.74■■□□□ 1.39
ITGA4-207ENST00000476089 RBM27Q9P2N5 1060 aaKnown RBP23.74■■□□□ 1.39
ITGA4-207ENST00000476089 PRPF3O43395 683 aaKnown RBP23.73■■□□□ 1.39
ITGA4-207ENST00000476089 ZSCAN23Q3MJ62 389 aa23.73■■□□□ 1.39
ITGA4-207ENST00000476089 JDP2Q8WYK2 163 aa23.73■■□□□ 1.39
ITGA4-207ENST00000476089 PLEKHA8P1O95397 391 aa23.73■■□□□ 1.39
ITGA4-207ENST00000476089 GUCY1A2P33402 732 aa23.73■■□□□ 1.39
ITGA4-207ENST00000476089 EHD4Q9H223 541 aa23.73■■□□□ 1.39
ITGA4-207ENST00000476089 TMEM63CQ9P1W3 806 aa23.73■■□□□ 1.39
ITGA4-207ENST00000476089 ISY1Q9ULR0 285 aaKnown RBP23.73■■□□□ 1.39
ITGA4-207ENST00000476089 BCS1LQ9Y276 419 aa23.73■■□□□ 1.39
ITGA4-207ENST00000476089 BRCA1P38398 1863 aaKnown RBP23.72■■□□□ 1.39
ITGA4-207ENST00000476089 MYH6P13533 1939 aa23.72■■□□□ 1.39
ITGA4-207ENST00000476089 GNAQP50148 359 aa23.72■■□□□ 1.39
ITGA4-207ENST00000476089 CACNB3P54284 484 aa23.72■■□□□ 1.39
ITGA4-207ENST00000476089 CEBPZQ03701 1054 aaKnown RBP23.72■■□□□ 1.39
ITGA4-207ENST00000476089 TCP10Q12799 353 aa23.72■■□□□ 1.39
ITGA4-207ENST00000476089 ZSCAN29Q8IWY8 852 aaPredicted RBP23.72■■□□□ 1.39
ITGA4-207ENST00000476089 TMEM47Q9BQJ4 181 aa23.72■■□□□ 1.39
ITGA4-207ENST00000476089 TDRD3Q9H7E2 651 aaKnown RBP23.72■■□□□ 1.39
ITGA4-207ENST00000476089 TMOD2Q9NZR1 351 aa23.72■■□□□ 1.39
ITGA4-207ENST00000476089 FAM198AQ9UFP1 575 aa23.71■■□□□ 1.39
ITGA4-207ENST00000476089 V9GY48 417 aaPredicted RBP23.71■■□□□ 1.39
ITGA4-207ENST00000476089 MYH8P13535 1937 aa23.71■■□□□ 1.39
ITGA4-207ENST00000476089 UBE2Q2LH0YL09 131 aa23.7■■□□□ 1.39
ITGA4-207ENST00000476089 FUT2Q10981 343 aa23.7■■□□□ 1.39
ITGA4-207ENST00000476089 L1TD1Q5T7N2 865 aaKnown RBP23.7■■□□□ 1.39
ITGA4-207ENST00000476089 AGBL3Q8NEM8 1001 aa23.7■■□□□ 1.39
ITGA4-207ENST00000476089 USP28Q96RU2 1077 aa23.7■■□□□ 1.39
ITGA4-207ENST00000476089 GMLQ99445 158 aa23.7■■□□□ 1.39
ITGA4-207ENST00000476089 TRIM34Q9BYJ4 488 aa23.7■■□□□ 1.39
ITGA4-207ENST00000476089 PI4KBQ9UBF8 816 aa23.7■■□□□ 1.39
ITGA4-207ENST00000476089 TOP1P11387 765 aaKnown RBP23.7■■□□□ 1.38
ITGA4-207ENST00000476089 PTGER2P43116 358 aa23.7■■□□□ 1.38
ITGA4-207ENST00000476089 GRM4Q14833 912 aa23.7■■□□□ 1.38
ITGA4-207ENST00000476089 DLGAP5Q15398 846 aa23.7■■□□□ 1.38
ITGA4-207ENST00000476089 MYSM1Q5VVJ2 828 aa23.7■■□□□ 1.38
ITGA4-207ENST00000476089 SRBD1Q8N5C6 995 aaKnown RBP23.7■■□□□ 1.38
ITGA4-207ENST00000476089 CEP95Q96GE4 821 aa23.7■■□□□ 1.38
ITGA4-207ENST00000476089 PRMT6Q96LA8 375 aaPredicted RBP23.7■■□□□ 1.38
ITGA4-207ENST00000476089 RCOR1Q9UKL0 485 aa23.7■■□□□ 1.38
ITGA4-207ENST00000476089 PLIN4Q96Q06 1357 aa23.7■■□□□ 1.38
ITGA4-207ENST00000476089 COL4A5P29400 1685 aa23.7■■□□□ 1.38
ITGA4-207ENST00000476089 FER1L6Q2WGJ9 1857 aa23.7■■□□□ 1.38
ITGA4-207ENST00000476089 KIF28PB7ZC32 967 aa23.69■■□□□ 1.38
ITGA4-207ENST00000476089 ENTPD3O75355 529 aa23.69■■□□□ 1.38
ITGA4-207ENST00000476089 MMP1P03956 469 aa23.69■■□□□ 1.38
ITGA4-207ENST00000476089 ZNF445P59923 1031 aa23.69■■□□□ 1.38
ITGA4-207ENST00000476089 ZFPM1Q8IX07 1006 aa23.69■■□□□ 1.38
ITGA4-207ENST00000476089 CNTNAP5Q8WYK1 1306 aa23.68■■□□□ 1.38
ITGA4-207ENST00000476089 RTEL1Q9NZ71 1219 aa23.68■■□□□ 1.38
ITGA4-207ENST00000476089 ZBTB12Q9Y330 459 aaPredicted RBP23.68■■□□□ 1.38
ITGA4-207ENST00000476089 SPDYE2BA6NHP3 402 aa23.68■■□□□ 1.38
ITGA4-207ENST00000476089 SPDYE6P0CI01 402 aa23.68■■□□□ 1.38
ITGA4-207ENST00000476089 AKR1B1P15121 316 aa23.68■■□□□ 1.38
ITGA4-207ENST00000476089 U2AF2P26368 475 aaKnown RBP eCLIP23.68■■□□□ 1.38
ITGA4-207ENST00000476089 SHMT1P34896 483 aa23.68■■□□□ 1.38
ITGA4-207ENST00000476089 CIAPIN1Q6FI81 312 aa23.68■■□□□ 1.38
ITGA4-207ENST00000476089 CCDC17Q96LX7 622 aa23.68■■□□□ 1.38
ITGA4-207ENST00000476089 CXCL9Q07325 125 aa23.67■■□□□ 1.38
ITGA4-207ENST00000476089 PKN1Q16512 942 aa23.67■■□□□ 1.38
ITGA4-207ENST00000476089 PPP4R3BQ5MIZ7 849 aa23.67■■□□□ 1.38
ITGA4-207ENST00000476089 CCDC183Q5T5S1 534 aa23.67■■□□□ 1.38
ITGA4-207ENST00000476089 FOXP4Q8IVH2 680 aaPredicted RBP23.67■■□□□ 1.38
ITGA4-207ENST00000476089 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.67■■□□□ 1.38
ITGA4-207ENST00000476089 MTMR4Q9NYA4 1195 aa23.67■■□□□ 1.38
ITGA4-207ENST00000476089 KCNJ14Q9UNX9 436 aa23.67■■□□□ 1.38
ITGA4-207ENST00000476089 MTMR7Q9Y216 660 aa23.67■■□□□ 1.38
ITGA4-207ENST00000476089 FSD2A1L4K1 749 aa23.66■■□□□ 1.38
ITGA4-207ENST00000476089 DDTLA6NHG4 134 aaPredicted RBP23.66■■□□□ 1.38
ITGA4-207ENST00000476089 NOVP48745 357 aa23.66■■□□□ 1.38
ITGA4-207ENST00000476089 TNIP1Q15025 636 aa23.66■■□□□ 1.38
ITGA4-207ENST00000476089 DIS3L2Q8IYB7 885 aaKnown RBP23.66■■□□□ 1.38
ITGA4-207ENST00000476089 BICD2Q8TD16 824 aa23.66■■□□□ 1.38
ITGA4-207ENST00000476089 LZTS2Q9BRK4 669 aa23.66■■□□□ 1.38
ITGA4-207ENST00000476089 FTOQ9C0B1 505 aaKnown RBP eCLIP23.66■■□□□ 1.38
ITGA4-207ENST00000476089 FOXP1Q9H334 677 aaPredicted RBP23.66■■□□□ 1.38
ITGA4-207ENST00000476089 POLR3EQ9NVU0 708 aa23.66■■□□□ 1.38
ITGA4-207ENST00000476089 NFKBIEO00221 500 aa23.66■■□□□ 1.38
ITGA4-207ENST00000476089 LETM1O95202 739 aaPredicted RBP23.66■■□□□ 1.38
ITGA4-207ENST00000476089 MAD2L2Q9UI95 211 aa23.66■■□□□ 1.38
ITGA4-207ENST00000476089 hCG_1642624A0A1W2PR95 340 aa23.65■■□□□ 1.38
ITGA4-207ENST00000476089 MPHOSPH10O00566 681 aaKnown RBP23.65■■□□□ 1.38
ITGA4-207ENST00000476089 YEATS4O95619 227 aa23.65■■□□□ 1.38
ITGA4-207ENST00000476089 STK38Q15208 465 aa23.65■■□□□ 1.38
ITGA4-207ENST00000476089 SF3A1Q15459 793 aaKnown RBP23.65■■□□□ 1.38
ITGA4-207ENST00000476089 NOSTRINQ8IVI9 506 aa23.65■■□□□ 1.38
ITGA4-207ENST00000476089 SYCE3A1L190 88 aa23.64■■□□□ 1.38
ITGA4-207ENST00000476089 PARP1P09874 1014 aaKnown RBP23.64■■□□□ 1.38
ITGA4-207ENST00000476089 STAG2Q8N3U4 1231 aa23.64■■□□□ 1.38
ITGA4-207ENST00000476089 KCNG4Q8TDN1 519 aa23.64■■□□□ 1.38
ITGA4-207ENST00000476089 BRMS1Q9HCU9 246 aa23.64■■□□□ 1.38
ITGA4-207ENST00000476089 VPS54Q9P1Q0 977 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms