RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 MAMSTRQ6ZN01 415 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 DDX46Q7L014 1031 aaKnown RBP7.94□□□□□ -1.14
UBR4-212ENST00000475973 UBE3BQ7Z3V4 1068 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 TMC4Q7Z404 712 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 PNMA8AQ86V59 439 aaPredicted RBP7.94□□□□□ -1.14
UBR4-212ENST00000475973 NLRP10Q86W26 655 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 FCHSD1Q86WN1 690 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 NIM1KQ8IY84 436 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 GPC2Q8N158 579 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 LARGE2Q8N3Y3 721 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 KIF18AQ8NI77 898 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 BICD2Q8TD16 824 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 DDX11Q96FC9 970 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 MTA3Q9BTC8 594 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 FTOQ9C0B1 505 aaKnown RBP eCLIP7.94□□□□□ -1.14
UBR4-212ENST00000475973 SCUBE2Q9NQ36 999 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 LHX6Q9UPM6 363 aa7.94□□□□□ -1.14
UBR4-212ENST00000475973 CCDC69A6NI79 296 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 POTECB2RU33 542 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 H3BQV1 296 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 M0R2C6 588 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 FZD9O00144 591 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 PPIP5K2O43314 1243 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 KINO60870 393 aaKnown RBP7.93□□□□□ -1.14
UBR4-212ENST00000475973 SLFN14P0C7P3 912 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 SKILP12757 684 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 HSP90B1P14625 803 aaKnown RBP7.93□□□□□ -1.14
UBR4-212ENST00000475973 U2AF2P26368 475 aaKnown RBP eCLIP7.93□□□□□ -1.14
UBR4-212ENST00000475973 EPHX2P34913 555 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 HTRA3P83110 453 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 TBX2Q13207 712 aaPredicted RBP7.93□□□□□ -1.14
UBR4-212ENST00000475973 GRAPQ13588 217 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 ARID5BQ14865 1188 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 NTRK3Q16288 839 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 EAPPQ56P03 285 aaPredicted RBP7.93□□□□□ -1.14
UBR4-212ENST00000475973 SLC10A5Q5PT55 438 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 IFFO2Q5TF58 517 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 NT5DC1Q5TFE4 455 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 ARMCX5Q6P1M9 558 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 TRIM65Q6PJ69 517 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 CCDC73Q6ZRK6 1079 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 CEP57L1Q8IYX8 460 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 DNAJC5GQ8N7S2 189 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 FSIP1Q8NA03 581 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 CCDC150Q8NCX0 1101 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 ZNF397Q8NF99 534 aaPredicted RBP7.93□□□□□ -1.14
UBR4-212ENST00000475973 GRAPLQ8TC17 118 aaPredicted RBP7.93□□□□□ -1.14
UBR4-212ENST00000475973 APPBP2Q92624 585 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 NBPF3Q9H094 633 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 VPS33BQ9H267 617 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 TAF1DQ9H5J8 278 aaPredicted RBP7.93□□□□□ -1.14
UBR4-212ENST00000475973 CWC25Q9NXE8 425 aaPredicted RBP7.93□□□□□ -1.14
UBR4-212ENST00000475973 ATP6V0A2Q9Y487 856 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 CDHR2Q9BYE9 1310 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 SNED1Q8TER0 1413 aa7.93□□□□□ -1.14
UBR4-212ENST00000475973 AKAP11Q9UKA4 1901 aa7.92□□□□□ -1.14
UBR4-212ENST00000475973 A0A1B0GUL7 405 aa7.92□□□□□ -1.14
UBR4-212ENST00000475973 GOLGA6L19H0YKK7 550 aa7.92□□□□□ -1.14
UBR4-212ENST00000475973 DHX16O60231 1041 aaKnown RBP7.92□□□□□ -1.14
UBR4-212ENST00000475973 BBOX1O75936 387 aa7.92□□□□□ -1.14
UBR4-212ENST00000475973 ZRANB2O95218 330 aaKnown RBP eCLIP7.92□□□□□ -1.142e-10■■■■□ 22.8
UBR4-212ENST00000475973 FGAP02671 866 aa7.92□□□□□ -1.14
UBR4-212ENST00000475973 NDUFA8P51970 172 aa7.92□□□□□ -1.14
UBR4-212ENST00000475973 TIMM10P62072 90 aa7.92□□□□□ -1.14
UBR4-212ENST00000475973 LRRFIP1Q32MZ4 808 aaKnown RBP7.92□□□□□ -1.14
UBR4-212ENST00000475973 KMT5BQ4FZB7 885 aa7.92□□□□□ -1.14
UBR4-212ENST00000475973 LRRC24Q50LG9 513 aa7.92□□□□□ -1.14
UBR4-212ENST00000475973 DPP8Q6V1X1 898 aaPredicted RBP7.92□□□□□ -1.14
UBR4-212ENST00000475973 SGMS1Q86VZ5 419 aa7.92□□□□□ -1.14
UBR4-212ENST00000475973 TMEM139Q8IV31 216 aa7.92□□□□□ -1.14
UBR4-212ENST00000475973 VGLL2Q8N8G2 317 aa7.92□□□□□ -1.14
UBR4-212ENST00000475973 JMYQ8N9B5 988 aa7.92□□□□□ -1.14
UBR4-212ENST00000475973 CCDC112Q8NEF3 446 aa7.92□□□□□ -1.14
UBR4-212ENST00000475973 SPATA20Q8TB22 786 aa7.92□□□□□ -1.14
UBR4-212ENST00000475973 MAP3K14Q99558 947 aa7.92□□□□□ -1.14
UBR4-212ENST00000475973 NAT10Q9H0A0 1025 aaKnown RBP7.92□□□□□ -1.14
UBR4-212ENST00000475973 FAM198AQ9UFP1 575 aa7.92□□□□□ -1.14
UBR4-212ENST00000475973 RIPOR2Q9Y4F9 1068 aa7.92□□□□□ -1.14
UBR4-212ENST00000475973 GJA3Q9Y6H8 435 aa7.92□□□□□ -1.14
UBR4-212ENST00000475973 PHLPP2Q6ZVD8 1323 aa7.92□□□□□ -1.14
UBR4-212ENST00000475973 STK36Q9NRP7 1315 aa7.92□□□□□ -1.14
UBR4-212ENST00000475973 KIF28PB7ZC32 967 aa7.91□□□□□ -1.14
UBR4-212ENST00000475973 GOLIM4O00461 696 aa7.91□□□□□ -1.14
UBR4-212ENST00000475973 SPTLC2O15270 562 aa7.91□□□□□ -1.14
UBR4-212ENST00000475973 ATP8B1O43520 1251 aa7.91□□□□□ -1.14
UBR4-212ENST00000475973 WDHD1O75717 1129 aaPredicted RBP7.91□□□□□ -1.14
UBR4-212ENST00000475973 SLU7O95391 586 aaKnown RBP7.91□□□□□ -1.14
UBR4-212ENST00000475973 PCCAP05165 728 aaPredicted RBP7.91□□□□□ -1.14
UBR4-212ENST00000475973 IFIT1P09914 478 aaKnown RBP7.91□□□□□ -1.14
UBR4-212ENST00000475973 COL9A1P20849 921 aa7.91□□□□□ -1.14
UBR4-212ENST00000475973 SARSP49591 514 aaKnown RBP7.91□□□□□ -1.14
UBR4-212ENST00000475973 RCAN1P53805 252 aa7.91□□□□□ -1.14
UBR4-212ENST00000475973 UBE3CQ15386 1083 aa7.91□□□□□ -1.14
UBR4-212ENST00000475973 PTPN14Q15678 1187 aa7.91□□□□□ -1.14
UBR4-212ENST00000475973 DPCR1Q3MIW9 517 aa7.91□□□□□ -1.14
UBR4-212ENST00000475973 CT47A1Q5JQC4 288 aaPredicted RBP7.91□□□□□ -1.14
UBR4-212ENST00000475973 RESP18Q5W5W9 173 aa7.91□□□□□ -1.14
UBR4-212ENST00000475973 ANO1Q5XXA6 986 aa7.91□□□□□ -1.14
UBR4-212ENST00000475973 TTLL5Q6EMB2 1281 aa7.91□□□□□ -1.14
UBR4-212ENST00000475973 C16orf45Q96MC5 204 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms