RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 TREML2Q5T2D2 321 aa12.92□□□□□ -0.34
CALD1-217ENST00000475772 THSD4Q6ZMP0 1018 aa12.92□□□□□ -0.34
CALD1-217ENST00000475772 TBC1D9Q6ZT07 1266 aa12.92□□□□□ -0.34
CALD1-217ENST00000475772 ZSCAN29Q8IWY8 852 aaPredicted RBP12.92□□□□□ -0.34
CALD1-217ENST00000475772 U2AF1L4Q8WU68 220 aaKnown RBP12.92□□□□□ -0.34
CALD1-217ENST00000475772 NSUN4Q96CB9 384 aaKnown RBP12.92□□□□□ -0.34
CALD1-217ENST00000475772 PHOX2BQ99453 314 aa12.92□□□□□ -0.34
CALD1-217ENST00000475772 PICK1Q9NRD5 415 aa12.92□□□□□ -0.34
CALD1-217ENST00000475772 LAMA3Q16787 3333 aa12.92□□□□□ -0.34
CALD1-217ENST00000475772 ATAD5Q96QE3 1844 aa12.92□□□□□ -0.34
CALD1-217ENST00000475772 TRIM75PA6NK02 468 aa12.91□□□□□ -0.34
CALD1-217ENST00000475772 ADCY3O60266 1144 aa12.91□□□□□ -0.34
CALD1-217ENST00000475772 ELNP15502 786 aa12.91□□□□□ -0.34
CALD1-217ENST00000475772 UBXN2AP68543 259 aa12.91□□□□□ -0.34
CALD1-217ENST00000475772 ERICH6Q7L0X2 663 aa12.91□□□□□ -0.34
CALD1-217ENST00000475772 DZIP1Q86YF9 867 aaKnown RBP12.91□□□□□ -0.34
CALD1-217ENST00000475772 BIN2Q9UBW5 565 aaPredicted RBP12.91□□□□□ -0.34
CALD1-217ENST00000475772 SIPA1L1O43166 1804 aa12.9□□□□□ -0.34
CALD1-217ENST00000475772 SRGAP3O43295 1099 aa12.9□□□□□ -0.34
CALD1-217ENST00000475772 IRF5Q13568 498 aa12.9□□□□□ -0.34
CALD1-217ENST00000475772 SPTY2D1Q68D10 685 aaPredicted RBP12.9□□□□□ -0.34
CALD1-217ENST00000475772 SLF2Q8IX21 1173 aa12.9□□□□□ -0.34
CALD1-217ENST00000475772 ANKRD13CQ8N6S4 541 aa12.9□□□□□ -0.34
CALD1-217ENST00000475772 KRI1Q8N9T8 703 aaKnown RBP12.9□□□□□ -0.34
CALD1-217ENST00000475772 ARHGAP45Q92619 1136 aa12.9□□□□□ -0.34
CALD1-217ENST00000475772 TMEM134Q9H6X4 195 aa12.9□□□□□ -0.34
CALD1-217ENST00000475772 AGTPBP1Q9UPW5 1226 aa12.9□□□□□ -0.34
CALD1-217ENST00000475772 HDAC5Q9UQL6 1122 aa12.9□□□□□ -0.34
CALD1-217ENST00000475772 AKAP2Q9Y2D5 859 aa12.9□□□□□ -0.34
CALD1-217ENST00000475772 PLXNB2O15031 1838 aa12.9□□□□□ -0.34
CALD1-217ENST00000475772 CDK5RAP2Q96SN8 1893 aa12.89□□□□□ -0.35
CALD1-217ENST00000475772 PNMA6EA0A0J9YXQ4 647 aa12.89□□□□□ -0.35
CALD1-217ENST00000475772 INHAP05111 366 aa12.89□□□□□ -0.35
CALD1-217ENST00000475772 ARID4AP29374 1257 aaPredicted RBP12.89□□□□□ -0.35
CALD1-217ENST00000475772 MCAMP43121 646 aa12.89□□□□□ -0.35
CALD1-217ENST00000475772 JAG1P78504 1218 aa12.89□□□□□ -0.35
CALD1-217ENST00000475772 SPP2Q13103 211 aa12.89□□□□□ -0.35
CALD1-217ENST00000475772 SWT1Q5T5J6 900 aaKnown RBP12.89□□□□□ -0.35
CALD1-217ENST00000475772 SPATA5Q8NB90 893 aa12.89□□□□□ -0.35
CALD1-217ENST00000475772 NEUROD6Q96NK8 337 aa12.89□□□□□ -0.35
CALD1-217ENST00000475772 OSBPL5Q9H0X9 879 aaPredicted RBP12.89□□□□□ -0.35
CALD1-217ENST00000475772 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.89□□□□□ -0.35
CALD1-217ENST00000475772 GJD2Q9UKL4 321 aa12.89□□□□□ -0.35
CALD1-217ENST00000475772 TNPO2O14787 897 aaKnown RBP12.88□□□□□ -0.35
CALD1-217ENST00000475772 ZBTB7BO15156 539 aaPredicted RBP12.88□□□□□ -0.35
CALD1-217ENST00000475772 GNAI3P08754 354 aa12.88□□□□□ -0.35
CALD1-217ENST00000475772 CAP2P40123 477 aa12.88□□□□□ -0.35
CALD1-217ENST00000475772 MVPQ14764 893 aaKnown RBP12.88□□□□□ -0.35
CALD1-217ENST00000475772 LRCH3Q96II8 777 aa12.88□□□□□ -0.35
CALD1-217ENST00000475772 PAK6Q9NQU5 681 aaPredicted RBP12.88□□□□□ -0.35
CALD1-217ENST00000475772 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.88□□□□□ -0.35
CALD1-217ENST00000475772 LOC285556D6RIA3 1793 aa12.88□□□□□ -0.35
CALD1-217ENST00000475772 COL6A3P12111 3177 aa12.87□□□□□ -0.35
CALD1-217ENST00000475772 FARP2O94887 1054 aaPredicted RBP12.87□□□□□ -0.35
CALD1-217ENST00000475772 FAM110CQ1W6H9 321 aa12.87□□□□□ -0.35
CALD1-217ENST00000475772 SH3D19Q5HYK7 790 aa12.87□□□□□ -0.35
CALD1-217ENST00000475772 PROCA1Q8NCQ7 364 aaPredicted RBP12.87□□□□□ -0.35
CALD1-217ENST00000475772 ZNF280CQ8ND82 737 aa12.87□□□□□ -0.35
CALD1-217ENST00000475772 SMCR8Q8TEV9 937 aaPredicted RBP12.87□□□□□ -0.35
CALD1-217ENST00000475772 DEFB118Q96PH6 123 aa12.87□□□□□ -0.35
CALD1-217ENST00000475772 HTATIP2Q9BUP3 242 aa12.87□□□□□ -0.35
CALD1-217ENST00000475772 PEX10O60683 326 aa12.86□□□□□ -0.35
CALD1-217ENST00000475772 BCAR3O75815 825 aa12.86□□□□□ -0.35
CALD1-217ENST00000475772 MAP4K4O95819 1239 aaPredicted RBP12.86□□□□□ -0.35
CALD1-217ENST00000475772 TFRCP02786 760 aaKnown RBP12.86□□□□□ -0.35
CALD1-217ENST00000475772 LDHCP07864 332 aa12.86□□□□□ -0.35
CALD1-217ENST00000475772 TRIM27P14373 513 aa12.86□□□□□ -0.35
CALD1-217ENST00000475772 HMGCS2P54868 508 aa12.86□□□□□ -0.35
CALD1-217ENST00000475772 TRIM32Q13049 653 aa12.86□□□□□ -0.35
CALD1-217ENST00000475772 SH3RF3Q8TEJ3 882 aaPredicted RBP12.86□□□□□ -0.35
CALD1-217ENST00000475772 ASCC2Q9H1I8 757 aaPredicted RBP12.86□□□□□ -0.35
CALD1-217ENST00000475772 DNAJC18Q9H819 358 aa12.86□□□□□ -0.35
CALD1-217ENST00000475772 RAI14Q9P0K7 980 aa12.86□□□□□ -0.35
CALD1-217ENST00000475772 FOCADQ5VW36 1801 aa12.85□□□□□ -0.35
CALD1-217ENST00000475772 COL2A1P02458 1487 aaPredicted RBP12.85□□□□□ -0.35
CALD1-217ENST00000475772 SHROOM1Q2M3G4 852 aaPredicted RBP12.85□□□□□ -0.35
CALD1-217ENST00000475772 ADGRA1Q86SQ6 560 aa12.85□□□□□ -0.35
CALD1-217ENST00000475772 METTL16Q86W50 562 aaKnown RBP12.85□□□□□ -0.35
CALD1-217ENST00000475772 DIS3LQ8TF46 1054 aaKnown RBP12.85□□□□□ -0.35
CALD1-217ENST00000475772 NLRP7Q8WX94 980 aa12.85□□□□□ -0.35
CALD1-217ENST00000475772 COA7Q96BR5 231 aa12.85□□□□□ -0.35
CALD1-217ENST00000475772 PAWRQ96IZ0 340 aaKnown RBP12.85□□□□□ -0.35
CALD1-217ENST00000475772 USP17L5A8MUK1 530 aa12.84□□□□□ -0.35
CALD1-217ENST00000475772 SOX1O00570 391 aaPredicted RBP12.84□□□□□ -0.35
CALD1-217ENST00000475772 GNAI2P04899 355 aa12.84□□□□□ -0.35
CALD1-217ENST00000475772 PPP4CP60510 307 aa12.84□□□□□ -0.35
CALD1-217ENST00000475772 GSTO1P78417 241 aa12.84□□□□□ -0.35
CALD1-217ENST00000475772 G3BP1Q13283 466 aaKnown RBP eCLIP12.84□□□□□ -0.35
CALD1-217ENST00000475772 TEX11Q8IYF3 940 aa12.84□□□□□ -0.35
CALD1-217ENST00000475772 WDR18Q9BV38 432 aa12.84□□□□□ -0.35
CALD1-217ENST00000475772 SNRKQ9NRH2 765 aa12.84□□□□□ -0.35
CALD1-217ENST00000475772 AATFQ9NY61 560 aaKnown RBP eCLIP12.84□□□□□ -0.35
CALD1-217ENST00000475772 NR2E3Q9Y5X4 410 aa12.84□□□□□ -0.35
CALD1-217ENST00000475772 CYP2E1P05181 493 aaPredicted RBP12.83□□□□□ -0.36
CALD1-217ENST00000475772 CAPN2P17655 700 aa12.83□□□□□ -0.36
CALD1-217ENST00000475772 GCLCP48506 637 aaPredicted RBP12.83□□□□□ -0.36
CALD1-217ENST00000475772 PTPN5P54829 565 aa12.83□□□□□ -0.36
CALD1-217ENST00000475772 Q3C1V9 767 aa12.83□□□□□ -0.36
CALD1-217ENST00000475772 ATF7IPQ6VMQ6 1270 aa12.83□□□□□ -0.36
CALD1-217ENST00000475772 TGFBRAP1Q8WUH2 860 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms