RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 SCAND2PQ9GZW5 306 aaPredicted RBP13.17□□□□□ -0.3
KCNIP3-206ENST00000475491 OFD1O75665 1012 aa13.17□□□□□ -0.3
KCNIP3-206ENST00000475491 CDC25AP30304 524 aa13.17□□□□□ -0.3
KCNIP3-206ENST00000475491 CRKP46108 304 aa13.17□□□□□ -0.3
KCNIP3-206ENST00000475491 IRX3P78415 501 aaPredicted RBP13.17□□□□□ -0.3
KCNIP3-206ENST00000475491 IKQ13123 557 aaPredicted RBP13.17□□□□□ -0.3
KCNIP3-206ENST00000475491 CLIP2Q9UDT6 1046 aa13.17□□□□□ -0.3
KCNIP3-206ENST00000475491 YDJCA8MPS7 323 aa13.17□□□□□ -0.3
KCNIP3-206ENST00000475491 AKR1B1P15121 316 aa13.17□□□□□ -0.3
KCNIP3-206ENST00000475491 BRD2P25440 801 aaKnown RBP13.17□□□□□ -0.3
KCNIP3-206ENST00000475491 C12orf60Q5U649 245 aa13.17□□□□□ -0.3
KCNIP3-206ENST00000475491 CDC42EP5Q6NZY7 148 aa13.17□□□□□ -0.3
KCNIP3-206ENST00000475491 HEATR3Q7Z4Q2 680 aa13.17□□□□□ -0.3
KCNIP3-206ENST00000475491 PNMA1Q8ND90 353 aa13.17□□□□□ -0.3
KCNIP3-206ENST00000475491 PRMT6Q96LA8 375 aaPredicted RBP13.17□□□□□ -0.3
KCNIP3-206ENST00000475491 PLIN2Q99541 437 aa13.17□□□□□ -0.3
KCNIP3-206ENST00000475491 TAF1LQ8IZX4 1826 aa13.17□□□□□ -0.3
KCNIP3-206ENST00000475491 C4AP0C0L4 1744 aa13.17□□□□□ -0.3
KCNIP3-206ENST00000475491 CICQ96RK0 1608 aaPredicted RBP13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 RASSF7Q02833 373 aa13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 GRIN1Q05586 938 aa13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 EARS2Q5JPH6 523 aaKnown RBP13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 STAMQ92783 540 aa13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 CEP95Q96GE4 821 aa13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 TRIM34Q9BYJ4 488 aa13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 SEMA3EO15041 775 aa13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 GSTO1P78417 241 aa13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 ALX1Q15699 326 aa13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 SASS6Q6UVJ0 657 aa13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 SRBD1Q8N5C6 995 aaKnown RBP13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 TEKT1Q969V4 418 aa13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 IL17RAQ96F46 866 aa13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 NUP88Q99567 741 aaPredicted RBP13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 COA1Q9GZY4 146 aa13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 KIF3AQ9Y496 699 aa13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 IRS2Q9Y4H2 1338 aa13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 RHBDL3P58872 404 aa13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 PTPN21Q16825 1174 aa13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 GOLPH3LQ9H4A5 285 aa13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 ATP8A2Q9NTI2 1148 aa13.16□□□□□ -0.3
KCNIP3-206ENST00000475491 DDTLA6NHG4 134 aaPredicted RBP13.15□□□□□ -0.3
KCNIP3-206ENST00000475491 CCDC192P0DO97 292 aa13.15□□□□□ -0.3
KCNIP3-206ENST00000475491 ZNF174Q15697 407 aa13.15□□□□□ -0.3
KCNIP3-206ENST00000475491 CCDC73Q6ZRK6 1079 aa13.15□□□□□ -0.3
KCNIP3-206ENST00000475491 KCTD1Q719H9 257 aa13.15□□□□□ -0.3
KCNIP3-206ENST00000475491 AGXT2Q9BYV1 514 aa13.15□□□□□ -0.3
KCNIP3-206ENST00000475491 IL1R1P14778 569 aa13.15□□□□□ -0.3
KCNIP3-206ENST00000475491 TYRO3Q06418 890 aa13.15□□□□□ -0.3
KCNIP3-206ENST00000475491 NTRK3Q16288 839 aa13.15□□□□□ -0.3
KCNIP3-206ENST00000475491 CCDC96Q2M329 555 aa13.15□□□□□ -0.3
KCNIP3-206ENST00000475491 NLGN2Q8NFZ4 835 aa13.15□□□□□ -0.3
KCNIP3-206ENST00000475491 CNKSR1Q969H4 720 aa13.15□□□□□ -0.3
KCNIP3-206ENST00000475491 PSMD14O00487 310 aa13.15□□□□□ -0.31
KCNIP3-206ENST00000475491 WNT7AO00755 349 aa13.15□□□□□ -0.31
KCNIP3-206ENST00000475491 EGFRP00533 1210 aa13.15□□□□□ -0.31
KCNIP3-206ENST00000475491 CERS3Q8IU89 383 aa13.15□□□□□ -0.31
KCNIP3-206ENST00000475491 ZBTB22O15209 634 aa13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 TNNT3P45378 269 aaPredicted RBP13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 NLRP5P59047 1200 aa13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 KIF23Q02241 960 aaPredicted RBP13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 TRIM5Q9C035 493 aa13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 CFAP45Q9UL16 551 aa13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 USP17L5A8MUK1 530 aa13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 KINO60870 393 aaKnown RBP13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 KIF20AO95235 890 aa13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 RASA1P20936 1047 aa13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 MYSM1Q5VVJ2 828 aa13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 TTBK2Q6IQ55 1244 aa13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 TMEM47Q9BQJ4 181 aa13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 CCDC94Q9BW85 323 aaPredicted RBP13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 ARPP21Q9UBL0 812 aaPredicted RBP13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 PCDHA7Q9UN72 937 aa13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 UBR3Q6ZT12 1888 aa13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 WDHD1O75717 1129 aaPredicted RBP13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 ECM2O94769 699 aaPredicted RBP13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 LETM1O95202 739 aaPredicted RBP13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 SEC23AQ15436 765 aa13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 CFAP100Q494V2 611 aa13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 SHISA4Q96DD7 197 aa13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 PCDHB6Q9Y5E3 794 aa13.14□□□□□ -0.31
KCNIP3-206ENST00000475491 AP5Z1O43299 807 aa13.13□□□□□ -0.31
KCNIP3-206ENST00000475491 UTP14CQ5TAP6 766 aaKnown RBP13.13□□□□□ -0.31
KCNIP3-206ENST00000475491 APOBEC3HQ6NTF7 200 aaKnown RBP13.13□□□□□ -0.31
KCNIP3-206ENST00000475491 PIK3AP1Q6ZUJ8 805 aa13.13□□□□□ -0.31
KCNIP3-206ENST00000475491 CHD4Q14839 1912 aa13.13□□□□□ -0.31
KCNIP3-206ENST00000475491 ASTN2O75129 1339 aaPredicted RBP13.13□□□□□ -0.31
KCNIP3-206ENST00000475491 COBLO75128 1261 aa13.13□□□□□ -0.31
KCNIP3-206ENST00000475491 CASP1P29466 404 aa13.13□□□□□ -0.31
KCNIP3-206ENST00000475491 SAFBQ15424 915 aaKnown RBP eCLIP13.13□□□□□ -0.31
KCNIP3-206ENST00000475491 GRAMD1CQ8IYS0 662 aa13.13□□□□□ -0.31
KCNIP3-206ENST00000475491 TMEM51Q9NW97 253 aa13.13□□□□□ -0.31
KCNIP3-206ENST00000475491 GPR75-ASB3A0A0A6YYF3 556 aa13.12□□□□□ -0.31
KCNIP3-206ENST00000475491 RCSD1Q6JBY9 416 aa13.12□□□□□ -0.31
KCNIP3-206ENST00000475491 LLPHQ9BRT6 129 aaKnown RBP13.12□□□□□ -0.31
KCNIP3-206ENST00000475491 LAMB2P55268 1798 aa13.12□□□□□ -0.31
KCNIP3-206ENST00000475491 CDKL5O76039 1030 aa13.12□□□□□ -0.31
KCNIP3-206ENST00000475491 MCM7P33993 719 aa13.12□□□□□ -0.31
KCNIP3-206ENST00000475491 ZNF165P49910 485 aa13.12□□□□□ -0.31
KCNIP3-206ENST00000475491 TROAPQ12815 778 aa13.12□□□□□ -0.31
KCNIP3-206ENST00000475491 USP49Q70CQ1 688 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms