RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 RBPJLQ9UBG7 517 aa14.28□□□□□ -0.12
CLIP2-204ENST00000474962 GJD2Q9UKL4 321 aa14.28□□□□□ -0.12
CLIP2-204ENST00000474962 CEP290O15078 2479 aa14.27□□□□□ -0.12
CLIP2-204ENST00000474962 PRKAB2O43741 272 aa14.27□□□□□ -0.13
CLIP2-204ENST00000474962 INHAP05111 366 aa14.27□□□□□ -0.13
CLIP2-204ENST00000474962 CYP2D6P10635 497 aa14.27□□□□□ -0.13
CLIP2-204ENST00000474962 MX1P20591 662 aa14.27□□□□□ -0.13
CLIP2-204ENST00000474962 SHMT1P34896 483 aa14.27□□□□□ -0.13
CLIP2-204ENST00000474962 GJA8P48165 433 aa14.27□□□□□ -0.13
CLIP2-204ENST00000474962 HERVK_113P62684 666 aa14.27□□□□□ -0.13
CLIP2-204ENST00000474962 ZYXQ15942 572 aaKnown RBP14.27□□□□□ -0.13
CLIP2-204ENST00000474962 ABCB5Q2M3G0 1257 aa14.27□□□□□ -0.13
CLIP2-204ENST00000474962 USP17L2Q6R6M4 530 aa14.27□□□□□ -0.13
CLIP2-204ENST00000474962 LCORLQ8N3X6 602 aa14.27□□□□□ -0.13
CLIP2-204ENST00000474962 ACER1Q8TDN7 264 aa14.27□□□□□ -0.13
CLIP2-204ENST00000474962 PXYLP1Q8TE99 480 aa14.27□□□□□ -0.13
CLIP2-204ENST00000474962 HAUS7Q99871 368 aa14.27□□□□□ -0.13
CLIP2-204ENST00000474962 CRNKL1Q9BZJ0 848 aaKnown RBP14.27□□□□□ -0.13
CLIP2-204ENST00000474962 ARMT1Q9H993 441 aa14.27□□□□□ -0.13
CLIP2-204ENST00000474962 MCM9Q9NXL9 1143 aa14.27□□□□□ -0.13
CLIP2-204ENST00000474962 RANBP2P49792 3224 aaKnown RBP14.27□□□□□ -0.13
CLIP2-204ENST00000474962 TTC41PQ6P2S7 1318 aa14.26□□□□□ -0.13
CLIP2-204ENST00000474962 GUCY1A2P33402 732 aa14.26□□□□□ -0.13
CLIP2-204ENST00000474962 GPRC5AQ8NFJ5 357 aa14.26□□□□□ -0.13
CLIP2-204ENST00000474962 NKX2-3Q8TAU0 364 aa14.26□□□□□ -0.13
CLIP2-204ENST00000474962 U2AF1L4Q8WU68 220 aaKnown RBP14.26□□□□□ -0.13
CLIP2-204ENST00000474962 DCP1AQ9NPI6 582 aaPredicted RBP14.26□□□□□ -0.13
CLIP2-204ENST00000474962 MORF4L1Q9UBU8 362 aa14.26□□□□□ -0.13
CLIP2-204ENST00000474962 MGAMO43451 1857 aa14.26□□□□□ -0.13
CLIP2-204ENST00000474962 ATAD5Q96QE3 1844 aa14.26□□□□□ -0.13
CLIP2-204ENST00000474962 MAST2Q6P0Q8 1798 aa14.26□□□□□ -0.13
CLIP2-204ENST00000474962 RBBP6Q7Z6E9 1792 aaKnown RBP14.26□□□□□ -0.13
CLIP2-204ENST00000474962 FOCADQ5VW36 1801 aa14.25□□□□□ -0.13
CLIP2-204ENST00000474962 SMIM22K7EJ46 135 aa14.25□□□□□ -0.13
CLIP2-204ENST00000474962 SGPL1O95470 568 aa14.25□□□□□ -0.13
CLIP2-204ENST00000474962 ADD2P35612 726 aa14.25□□□□□ -0.13
CLIP2-204ENST00000474962 GABPAQ06546 454 aa14.25□□□□□ -0.13
CLIP2-204ENST00000474962 DYNLL2Q96FJ2 89 aa14.25□□□□□ -0.13
CLIP2-204ENST00000474962 CABP5Q9NP86 173 aa14.25□□□□□ -0.13
CLIP2-204ENST00000474962 MYH1P12882 1939 aa14.25□□□□□ -0.13
CLIP2-204ENST00000474962 DNAH12Q6ZR08 3092 aa14.25□□□□□ -0.13
CLIP2-204ENST00000474962 H0YGN5 161 aa14.24□□□□□ -0.13
CLIP2-204ENST00000474962 GLRX3O76003 335 aaKnown RBP14.24□□□□□ -0.13
CLIP2-204ENST00000474962 MBD4O95243 580 aa14.24□□□□□ -0.13
CLIP2-204ENST00000474962 TFRCP02786 760 aaKnown RBP14.24□□□□□ -0.13
CLIP2-204ENST00000474962 TRIM32Q13049 653 aa14.24□□□□□ -0.13
CLIP2-204ENST00000474962 SEPT2Q15019 361 aa14.24□□□□□ -0.13
CLIP2-204ENST00000474962 UBE2Q1Q7Z7E8 422 aa14.24□□□□□ -0.13
CLIP2-204ENST00000474962 SLC44A5Q8NCS7 719 aa14.24□□□□□ -0.13
CLIP2-204ENST00000474962 DPF3Q92784 378 aa14.24□□□□□ -0.13
CLIP2-204ENST00000474962 DEFB118Q96PH6 123 aa14.24□□□□□ -0.13
CLIP2-204ENST00000474962 FEZ1Q99689 392 aa14.24□□□□□ -0.13
CLIP2-204ENST00000474962 CYP2D7A0A087X1C5 515 aa14.23□□□□□ -0.13
CLIP2-204ENST00000474962 A0A1W2PRG0 241 aa14.23□□□□□ -0.13
CLIP2-204ENST00000474962 USP17L15C9J2P7 530 aa14.23□□□□□ -0.13
CLIP2-204ENST00000474962 USP17L13C9JLJ4 530 aa14.23□□□□□ -0.13
CLIP2-204ENST00000474962 USP17L11C9JVI0 530 aa14.23□□□□□ -0.13
CLIP2-204ENST00000474962 USP17L18D6R9N7 530 aa14.23□□□□□ -0.13
CLIP2-204ENST00000474962 USP17L22D6RA61 530 aa14.23□□□□□ -0.13
CLIP2-204ENST00000474962 USP17L17D6RBQ6 530 aa14.23□□□□□ -0.13
CLIP2-204ENST00000474962 USP17L19D6RCP7 530 aa14.23□□□□□ -0.13
CLIP2-204ENST00000474962 USP17L20D6RJB6 530 aa14.23□□□□□ -0.13
CLIP2-204ENST00000474962 MPHOSPH10O00566 681 aaKnown RBP14.23□□□□□ -0.13
CLIP2-204ENST00000474962 CYP2B6P20813 491 aa14.23□□□□□ -0.13
CLIP2-204ENST00000474962 PDE1AP54750 535 aa14.23□□□□□ -0.13
CLIP2-204ENST00000474962 C1QBPQ07021 282 aaKnown RBP14.23□□□□□ -0.13
CLIP2-204ENST00000474962 USP17L24Q0WX57 530 aa14.23□□□□□ -0.13
CLIP2-204ENST00000474962 CATSPERGQ6ZRH7 1159 aa14.23□□□□□ -0.13
CLIP2-204ENST00000474962 OTUD7AQ8TE49 926 aaPredicted RBP14.23□□□□□ -0.13
CLIP2-204ENST00000474962 C12orf42Q96LP6 360 aa14.23□□□□□ -0.13
CLIP2-204ENST00000474962 PAGR1Q9BTK6 254 aa14.23□□□□□ -0.13
CLIP2-204ENST00000474962 KIAA1683Q9H0B3 1180 aa14.23□□□□□ -0.13
CLIP2-204ENST00000474962 PORCNQ9H237 461 aa14.23□□□□□ -0.13
CLIP2-204ENST00000474962 LOC285556D6RIA3 1793 aa14.23□□□□□ -0.13
CLIP2-204ENST00000474962 ERVK-9P63128 1117 aa14.22□□□□□ -0.13
CLIP2-204ENST00000474962 ERVK-24P63145 666 aa14.22□□□□□ -0.13
CLIP2-204ENST00000474962 HABP4Q5JVS0 413 aaKnown RBP14.22□□□□□ -0.13
CLIP2-204ENST00000474962 TSHZ3Q63HK5 1081 aa14.22□□□□□ -0.13
CLIP2-204ENST00000474962 SIAH1Q8IUQ4 282 aa14.22□□□□□ -0.13
CLIP2-204ENST00000474962 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.22□□□□□ -0.13
CLIP2-204ENST00000474962 PUS7LQ9H0K6 701 aaKnown RBP14.22□□□□□ -0.13
CLIP2-204ENST00000474962 PAK6Q9NQU5 681 aaPredicted RBP14.22□□□□□ -0.13
CLIP2-204ENST00000474962 USP17L12C9JPN9 530 aa14.21□□□□□ -0.13
CLIP2-204ENST00000474962 USP17L21D6R901 530 aa14.21□□□□□ -0.13
CLIP2-204ENST00000474962 CNMDO75829 334 aa14.21□□□□□ -0.13
CLIP2-204ENST00000474962 VCAM1P19320 739 aa14.21□□□□□ -0.13
CLIP2-204ENST00000474962 USP14P54578 494 aa14.21□□□□□ -0.13
CLIP2-204ENST00000474962 UBE3CQ15386 1083 aa14.21□□□□□ -0.13
CLIP2-204ENST00000474962 LRRFIP1Q32MZ4 808 aaKnown RBP14.21□□□□□ -0.13
CLIP2-204ENST00000474962 RPAP3Q9H6T3 665 aaPredicted RBP14.21□□□□□ -0.13
CLIP2-204ENST00000474962 ATP8A2Q9NTI2 1148 aa14.21□□□□□ -0.13
CLIP2-204ENST00000474962 STAP2Q9UGK3 403 aa14.21□□□□□ -0.13
CLIP2-204ENST00000474962 COLQQ9Y215 455 aaPredicted RBP14.21□□□□□ -0.13
CLIP2-204ENST00000474962 SZT2Q5T011 3432 aa14.2□□□□□ -0.14
CLIP2-204ENST00000474962 FARP2O94887 1054 aaPredicted RBP14.2□□□□□ -0.14
CLIP2-204ENST00000474962 HMGCRP04035 888 aa14.2□□□□□ -0.14
CLIP2-204ENST00000474962 MAPK4P31152 587 aa14.2□□□□□ -0.14
CLIP2-204ENST00000474962 KIAA1755Q5JYT7 1200 aa14.2□□□□□ -0.14
CLIP2-204ENST00000474962 C12orf60Q5U649 245 aa14.2□□□□□ -0.14
CLIP2-204ENST00000474962 ZSCAN25Q6NSZ9 544 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms