RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 NEDD1Q8NHV4 660 aa23.84■■□□□ 1.41
CDHR3-210ENST00000474330 ZBTB43O43298 467 aa23.84■■□□□ 1.41
CDHR3-210ENST00000474330 CELF2O95319 508 aaKnown RBP23.84■■□□□ 1.41
CDHR3-210ENST00000474330 IFIT1BQ5T764 474 aaKnown RBP23.84■■□□□ 1.41
CDHR3-210ENST00000474330 SYNE3Q6ZMZ3 975 aa23.84■■□□□ 1.41
CDHR3-210ENST00000474330 DGKHQ86XP1 1220 aa23.84■■□□□ 1.41
CDHR3-210ENST00000474330 ANKS1AQ92625 1134 aa23.84■■□□□ 1.41
CDHR3-210ENST00000474330 IL17RBQ9NRM6 502 aa23.84■■□□□ 1.41
CDHR3-210ENST00000474330 RASSF10A6NK89 507 aa23.83■■□□□ 1.41
CDHR3-210ENST00000474330 NMT2O60551 498 aa23.83■■□□□ 1.41
CDHR3-210ENST00000474330 SHMT1P34896 483 aa23.83■■□□□ 1.41
CDHR3-210ENST00000474330 RCAN1P53805 252 aa23.83■■□□□ 1.41
CDHR3-210ENST00000474330 TNFAIP1Q13829 316 aa23.83■■□□□ 1.41
CDHR3-210ENST00000474330 CRACR2BQ8N4Y2 399 aaPredicted RBP23.83■■□□□ 1.41
CDHR3-210ENST00000474330 SCAF8Q9UPN6 1271 aaKnown RBP23.83■■□□□ 1.41
CDHR3-210ENST00000474330 DHX16O60231 1041 aaKnown RBP23.82■■□□□ 1.4
CDHR3-210ENST00000474330 NCOA5Q9HCD5 579 aaKnown RBP23.82■■□□□ 1.4
CDHR3-210ENST00000474330 NID2Q14112 1375 aa23.82■■□□□ 1.4
CDHR3-210ENST00000474330 GJB2P29033 226 aa23.81■■□□□ 1.4
CDHR3-210ENST00000474330 TNNI2P48788 182 aa23.81■■□□□ 1.4
CDHR3-210ENST00000474330 METAP2P50579 478 aaKnown RBP eCLIP23.81■■□□□ 1.4
CDHR3-210ENST00000474330 NUCB2P80303 420 aa23.81■■□□□ 1.4
CDHR3-210ENST00000474330 DEFB115Q30KQ5 88 aa23.81■■□□□ 1.4
CDHR3-210ENST00000474330 RCSD1Q6JBY9 416 aa23.81■■□□□ 1.4
CDHR3-210ENST00000474330 ZNF654Q8IZM8 581 aa23.81■■□□□ 1.4
CDHR3-210ENST00000474330 SMARCC2Q8TAQ2 1214 aa23.81■■□□□ 1.4
CDHR3-210ENST00000474330 DNAJC18Q9H819 358 aa23.81■■□□□ 1.4
CDHR3-210ENST00000474330 ABT1Q9ULW3 272 aaKnown RBP23.81■■□□□ 1.4
CDHR3-210ENST00000474330 PLIN4Q96Q06 1357 aa23.81■■□□□ 1.4
CDHR3-210ENST00000474330 VEGFBP49765 207 aa23.81■■□□□ 1.4
CDHR3-210ENST00000474330 CCDC17Q96LX7 622 aa23.81■■□□□ 1.4
CDHR3-210ENST00000474330 CSRNP1Q96S65 589 aa23.81■■□□□ 1.4
CDHR3-210ENST00000474330 TLL2Q9Y6L7 1015 aa23.81■■□□□ 1.4
CDHR3-210ENST00000474330 PITPNM2Q9BZ72 1349 aa23.8■■□□□ 1.4
CDHR3-210ENST00000474330 CTDNEP1O95476 244 aa23.8■■□□□ 1.4
CDHR3-210ENST00000474330 TATDN1Q6P1N9 297 aa23.8■■□□□ 1.4
CDHR3-210ENST00000474330 MICU3Q86XE3 530 aa23.8■■□□□ 1.4
CDHR3-210ENST00000474330 RAB11FIP4Q86YS3 637 aa23.8■■□□□ 1.4
CDHR3-210ENST00000474330 APOBEC3FQ8IUX4 373 aaKnown RBP23.8■■□□□ 1.4
CDHR3-210ENST00000474330 SULF1Q8IWU6 871 aa23.8■■□□□ 1.4
CDHR3-210ENST00000474330 NSUN7Q8NE18 718 aaKnown RBP23.8■■□□□ 1.4
CDHR3-210ENST00000474330 ZNF408Q9H9D4 720 aa23.8■■□□□ 1.4
CDHR3-210ENST00000474330 HERC5Q9UII4 1024 aaKnown RBP23.8■■□□□ 1.4
CDHR3-210ENST00000474330 GOLGA8AA7E2F4 631 aa23.79■■□□□ 1.4
CDHR3-210ENST00000474330 NOVP48745 357 aa23.79■■□□□ 1.4
CDHR3-210ENST00000474330 SAPCD2Q86UD0 394 aa23.79■■□□□ 1.4
CDHR3-210ENST00000474330 MYL10Q9BUA6 226 aa23.79■■□□□ 1.4
CDHR3-210ENST00000474330 TRIM34Q9BYJ4 488 aa23.79■■□□□ 1.4
CDHR3-210ENST00000474330 GREB1LQ9C091 1923 aaPredicted RBP23.79■■□□□ 1.4
CDHR3-210ENST00000474330 AKR1B1P15121 316 aa23.78■■□□□ 1.4
CDHR3-210ENST00000474330 RXRAP19793 462 aa23.78■■□□□ 1.4
CDHR3-210ENST00000474330 RAB3GAP1Q15042 981 aa23.78■■□□□ 1.4
CDHR3-210ENST00000474330 PPP2R5BQ15173 497 aa23.78■■□□□ 1.4
CDHR3-210ENST00000474330 CATIPQ7Z7H3 387 aa23.78■■□□□ 1.4
CDHR3-210ENST00000474330 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.78■■□□□ 1.4
CDHR3-210ENST00000474330 JAK2O60674 1132 aa23.77■■□□□ 1.4
CDHR3-210ENST00000474330 CALM1P0DP23 149 aa23.77■■□□□ 1.4
CDHR3-210ENST00000474330 CALM2P0DP24 149 aa23.77■■□□□ 1.4
CDHR3-210ENST00000474330 CALM3P0DP25 149 aa23.77■■□□□ 1.4
CDHR3-210ENST00000474330 SLURP2P0DP57 97 aa23.77■■□□□ 1.4
CDHR3-210ENST00000474330 HMGN5P82970 282 aaKnown RBP23.77■■□□□ 1.4
CDHR3-210ENST00000474330 TMEM39BQ9GZU3 492 aa23.77■■□□□ 1.4
CDHR3-210ENST00000474330 FAM217BQ9NTX9 383 aaPredicted RBP23.77■■□□□ 1.4
CDHR3-210ENST00000474330 IGKV6D-41A0A0C4DH26 115 aa23.77■■□□□ 1.4
CDHR3-210ENST00000474330 CPLX1O14810 134 aa23.77■■□□□ 1.4
CDHR3-210ENST00000474330 DDAH1O94760 285 aa23.77■■□□□ 1.4
CDHR3-210ENST00000474330 CDC27P30260 824 aa23.77■■□□□ 1.4
CDHR3-210ENST00000474330 TROAPQ12815 778 aa23.77■■□□□ 1.4
CDHR3-210ENST00000474330 RASA3Q14644 834 aa23.77■■□□□ 1.4
CDHR3-210ENST00000474330 FANCBQ8NB91 859 aa23.77■■□□□ 1.4
CDHR3-210ENST00000474330 PTPDC1A2A3K4 754 aa23.76■■□□□ 1.39
CDHR3-210ENST00000474330 FAM196BA6NMK8 535 aa23.76■■□□□ 1.39
CDHR3-210ENST00000474330 TBC1D12O60347 775 aa23.76■■□□□ 1.39
CDHR3-210ENST00000474330 DTNBO60941 627 aa23.76■■□□□ 1.39
CDHR3-210ENST00000474330 PDIA4P13667 645 aaKnown RBP23.76■■□□□ 1.39
CDHR3-210ENST00000474330 ADD1P35611 737 aaKnown RBP23.76■■□□□ 1.39
CDHR3-210ENST00000474330 PKP1Q13835 747 aa23.76■■□□□ 1.39
CDHR3-210ENST00000474330 CERKLQ49MI3 558 aaPredicted RBP23.76■■□□□ 1.39
CDHR3-210ENST00000474330 CDCA5Q96FF9 252 aa23.76■■□□□ 1.39
CDHR3-210ENST00000474330 CEP95Q96GE4 821 aa23.76■■□□□ 1.39
CDHR3-210ENST00000474330 KAT14Q9H8E8 782 aa23.76■■□□□ 1.39
CDHR3-210ENST00000474330 CCDC196A0A1B0GTZ2 297 aa23.75■■□□□ 1.39
CDHR3-210ENST00000474330 RTN1Q16799 776 aa23.75■■□□□ 1.39
CDHR3-210ENST00000474330 PRAMEF18Q5VWM3 479 aa23.75■■□□□ 1.39
CDHR3-210ENST00000474330 CPLX2Q6PUV4 134 aaKnown RBP23.75■■□□□ 1.39
CDHR3-210ENST00000474330 CCDC144CPQ8IYA2 1237 aa23.75■■□□□ 1.39
CDHR3-210ENST00000474330 NUP133Q8WUM0 1156 aa23.75■■□□□ 1.39
CDHR3-210ENST00000474330 DEFB129Q9H1M3 183 aa23.75■■□□□ 1.39
CDHR3-210ENST00000474330 STX8Q9UNK0 236 aa23.75■■□□□ 1.39
CDHR3-210ENST00000474330 PDCP20941 246 aa23.74■■□□□ 1.39
CDHR3-210ENST00000474330 SYT1P21579 422 aa23.74■■□□□ 1.39
CDHR3-210ENST00000474330 MAP3K10Q02779 954 aa23.74■■□□□ 1.39
CDHR3-210ENST00000474330 NTRK3Q16288 839 aa23.74■■□□□ 1.39
CDHR3-210ENST00000474330 TMEM47Q9BQJ4 181 aa23.74■■□□□ 1.39
CDHR3-210ENST00000474330 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.74■■□□□ 1.39
CDHR3-210ENST00000474330 MTMR4Q9NYA4 1195 aa23.74■■□□□ 1.39
CDHR3-210ENST00000474330 WDR33Q9C0J8 1336 aaKnown RBP23.74■■□□□ 1.39
CDHR3-210ENST00000474330 CDKL5O76039 1030 aa23.73■■□□□ 1.39
CDHR3-210ENST00000474330 CYP4F22Q6NT55 531 aa23.73■■□□□ 1.39
CDHR3-210ENST00000474330 PNMA1Q8ND90 353 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms