RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 UNCXA6NJT0 531 aa5.44□□□□□ -1.54
ECHDC1-213ENST00000474240 ETV2O00321 342 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-213ENST00000474240 ZNF862O60290 1169 aa5.44□□□□□ -1.54
ECHDC1-213ENST00000474240 NKPD1Q17RQ9 610 aa5.44□□□□□ -1.54
ECHDC1-213ENST00000474240 ZC3H12AQ5D1E8 599 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-213ENST00000474240 STK35Q8TDR2 534 aa5.44□□□□□ -1.54
ECHDC1-213ENST00000474240 ISL2Q96A47 359 aa5.44□□□□□ -1.54
ECHDC1-213ENST00000474240 ELMO3Q96BJ8 720 aa5.44□□□□□ -1.54
ECHDC1-213ENST00000474240 SPATA32Q96LK8 384 aa5.44□□□□□ -1.54
ECHDC1-213ENST00000474240 PARD6AQ9NPB6 346 aa5.44□□□□□ -1.54
ECHDC1-213ENST00000474240 KCNQ5Q9NR82 932 aa5.44□□□□□ -1.54
ECHDC1-213ENST00000474240 KIAA1522Q9P206 1035 aaPredicted RBP5.44□□□□□ -1.54
ECHDC1-213ENST00000474240 PCOLCE2Q9UKZ9 415 aa5.44□□□□□ -1.54
ECHDC1-213ENST00000474240 PCDHA4Q9UN74 947 aa5.44□□□□□ -1.54
ECHDC1-213ENST00000474240 SUPT16HQ9Y5B9 1047 aaKnown RBP5.44□□□□□ -1.54
ECHDC1-213ENST00000474240 FANCGO15287 622 aa5.43□□□□□ -1.54
ECHDC1-213ENST00000474240 FOXD2O60548 495 aaPredicted RBP5.43□□□□□ -1.54
ECHDC1-213ENST00000474240 MED14OSP0DP75 135 aa5.43□□□□□ -1.54
ECHDC1-213ENST00000474240 TFE3P19532 575 aaPredicted RBP5.43□□□□□ -1.54
ECHDC1-213ENST00000474240 RPL6Q02878 288 aaKnown RBP5.43□□□□□ -1.54
ECHDC1-213ENST00000474240 PDE4BQ07343 736 aa5.43□□□□□ -1.54
ECHDC1-213ENST00000474240 CAMK2GQ13555 558 aaPredicted RBP5.43□□□□□ -1.54
ECHDC1-213ENST00000474240 MAP3K11Q16584 847 aa5.43□□□□□ -1.54
ECHDC1-213ENST00000474240 SNAP47Q5SQN1 464 aa5.43□□□□□ -1.54
ECHDC1-213ENST00000474240 GAL3ST3Q96A11 431 aa5.43□□□□□ -1.54
ECHDC1-213ENST00000474240 IRF2BPLQ9H1B7 796 aa5.43□□□□□ -1.54
ECHDC1-213ENST00000474240 PICK1Q9NRD5 415 aa5.43□□□□□ -1.54
ECHDC1-213ENST00000474240 SMG5Q9UPR3 1016 aaKnown RBP5.43□□□□□ -1.54
ECHDC1-213ENST00000474240 TCF3P15923 654 aa5.42□□□□□ -1.54
ECHDC1-213ENST00000474240 EIF4A3P38919 411 aaKnown RBP5.42□□□□□ -1.54
ECHDC1-213ENST00000474240 KRTAP10-2P60368 255 aa5.42□□□□□ -1.54
ECHDC1-213ENST00000474240 MPP2Q14168 576 aa5.42□□□□□ -1.54
ECHDC1-213ENST00000474240 LDLRAD1Q5T700 205 aa5.42□□□□□ -1.54
ECHDC1-213ENST00000474240 DBX2Q6ZNG2 339 aa5.42□□□□□ -1.54
ECHDC1-213ENST00000474240 FAM214BQ7L5A3 538 aa5.42□□□□□ -1.54
ECHDC1-213ENST00000474240 USP48Q86UV5 1035 aa5.42□□□□□ -1.54
ECHDC1-213ENST00000474240 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.42□□□□□ -1.54
ECHDC1-213ENST00000474240 ZNF654Q8IZM8 581 aa5.42□□□□□ -1.54
ECHDC1-213ENST00000474240 RNF214Q8ND24 703 aa5.42□□□□□ -1.54
ECHDC1-213ENST00000474240 GRIN3AQ8TCU5 1115 aa5.42□□□□□ -1.54
ECHDC1-213ENST00000474240 GATAD2BQ8WXI9 593 aa5.42□□□□□ -1.54
ECHDC1-213ENST00000474240 LRRC3Q9BY71 257 aa5.42□□□□□ -1.54
ECHDC1-213ENST00000474240 ZCCHC4Q9H5U6 513 aa5.42□□□□□ -1.54
ECHDC1-213ENST00000474240 SSU72Q9NP77 194 aaKnown RBP5.42□□□□□ -1.54
ECHDC1-213ENST00000474240 KBTBD4Q9NVX7 518 aa5.42□□□□□ -1.54
ECHDC1-213ENST00000474240 GTF2IRD1Q9UHL9 959 aa5.42□□□□□ -1.54
ECHDC1-213ENST00000474240 BMP7P18075 431 aa5.41□□□□□ -1.54
ECHDC1-213ENST00000474240 GLDCP23378 1020 aa5.41□□□□□ -1.54
ECHDC1-213ENST00000474240 GDNFP39905 211 aa5.41□□□□□ -1.54
ECHDC1-213ENST00000474240 CLCN7P51798 805 aa5.41□□□□□ -1.54
ECHDC1-213ENST00000474240 CWF19L2Q2TBE0 894 aaKnown RBP5.41□□□□□ -1.54
ECHDC1-213ENST00000474240 KIAA0825Q8IV33 1275 aa5.41□□□□□ -1.54
ECHDC1-213ENST00000474240 ZNF507Q8TCN5 953 aa5.41□□□□□ -1.54
ECHDC1-213ENST00000474240 GNAT3A8MTJ3 354 aa5.4□□□□□ -1.54
ECHDC1-213ENST00000474240 IGF2BP3O00425 579 aaKnown RBP eCLIP5.4□□□□□ -1.54
ECHDC1-213ENST00000474240 CILPO75339 1184 aa5.4□□□□□ -1.54
ECHDC1-213ENST00000474240 PF4P02776 101 aa5.4□□□□□ -1.54
ECHDC1-213ENST00000474240 SEPT6Q14141 434 aa5.4□□□□□ -1.54
ECHDC1-213ENST00000474240 MLECQ14165 292 aa5.4□□□□□ -1.54
ECHDC1-213ENST00000474240 WIPI1Q5MNZ9 446 aaPredicted RBP5.4□□□□□ -1.54
ECHDC1-213ENST00000474240 RASIP1Q5U651 963 aa5.4□□□□□ -1.54
ECHDC1-213ENST00000474240 FAM196AQ6ZSG2 479 aa5.4□□□□□ -1.54
ECHDC1-213ENST00000474240 CDC37L1Q7L3B6 337 aa5.4□□□□□ -1.54
ECHDC1-213ENST00000474240 TGIF2Q9GZN2 237 aa5.4□□□□□ -1.54
ECHDC1-213ENST00000474240 ATP13A1Q9HD20 1204 aa5.4□□□□□ -1.54
ECHDC1-213ENST00000474240 TLR6Q9Y2C9 796 aa5.4□□□□□ -1.54
ECHDC1-213ENST00000474240 SYN1P17600 705 aa5.39□□□□□ -1.55
ECHDC1-213ENST00000474240 RING1Q06587 406 aa5.39□□□□□ -1.55
ECHDC1-213ENST00000474240 COL9A2Q14055 689 aaPredicted RBP5.39□□□□□ -1.55
ECHDC1-213ENST00000474240 ZBTB37Q5TC79 503 aa5.39□□□□□ -1.55
ECHDC1-213ENST00000474240 GOLM1Q8NBJ4 401 aa5.39□□□□□ -1.55
ECHDC1-213ENST00000474240 PLPPR2Q96GM1 343 aa5.39□□□□□ -1.55
ECHDC1-213ENST00000474240 SPON2Q9BUD6 331 aa5.39□□□□□ -1.55
ECHDC1-213ENST00000474240 NT5C1AQ9BXI3 368 aa5.39□□□□□ -1.55
ECHDC1-213ENST00000474240 DDX41Q9UJV9 622 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-213ENST00000474240 ADAM30Q9UKF2 790 aa5.39□□□□□ -1.55
ECHDC1-213ENST00000474240 PCDHB5Q9Y5E4 795 aa5.39□□□□□ -1.55
ECHDC1-213ENST00000474240 FAM221AA4D161 298 aa5.38□□□□□ -1.55
ECHDC1-213ENST00000474240 MINDY4BA8MYZ0 360 aa5.38□□□□□ -1.55
ECHDC1-213ENST00000474240 GREM1O60565 184 aa5.38□□□□□ -1.55
ECHDC1-213ENST00000474240 CAP2P40123 477 aa5.38□□□□□ -1.55
ECHDC1-213ENST00000474240 HDLBPQ00341 1268 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-213ENST00000474240 GNL2Q13823 731 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-213ENST00000474240 LRFN4Q6PJG9 635 aa5.38□□□□□ -1.55
ECHDC1-213ENST00000474240 GGNQ86UU5 652 aa5.38□□□□□ -1.55
ECHDC1-213ENST00000474240 METTL16Q86W50 562 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-213ENST00000474240 NT5DC4Q86YG4 428 aa5.38□□□□□ -1.55
ECHDC1-213ENST00000474240 ZNF296Q8WUU4 475 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-213ENST00000474240 WNT10AQ9GZT5 417 aa5.38□□□□□ -1.55
ECHDC1-213ENST00000474240 CCSER2Q9H7U1 834 aa5.38□□□□□ -1.55
ECHDC1-213ENST00000474240 PRDM10Q9NQV6 1147 aa5.38□□□□□ -1.55
ECHDC1-213ENST00000474240 PRAMEF27A3QJZ7 478 aa5.37□□□□□ -1.55
ECHDC1-213ENST00000474240 DCDC2CA8MYV0 355 aa5.37□□□□□ -1.55
ECHDC1-213ENST00000474240 GFRA2O00451 464 aa5.37□□□□□ -1.55
ECHDC1-213ENST00000474240 F13A1P00488 732 aa5.37□□□□□ -1.55
ECHDC1-213ENST00000474240 IMPDH2P12268 514 aa5.37□□□□□ -1.55
ECHDC1-213ENST00000474240 ETF1P62495 437 aaKnown RBP5.37□□□□□ -1.55
ECHDC1-213ENST00000474240 APOBRQ0VD83 1088 aa5.37□□□□□ -1.55
ECHDC1-213ENST00000474240 NFIXQ14938 502 aa5.37□□□□□ -1.55
ECHDC1-213ENST00000474240 ZNF746Q6NUN9 644 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms