RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 ARHGEF10LQ9HCE6 1279 aa14.72□□□□□ -0.05
DDX56-209ENST00000473924 ANO2Q9NQ90 1003 aa14.72□□□□□ -0.05
DDX56-209ENST00000473924 SAGE1Q9NXZ1 904 aa14.72□□□□□ -0.05
DDX56-209ENST00000473924 TMOD4Q9NZQ9 345 aa14.72□□□□□ -0.05
DDX56-209ENST00000473924 U3KPZ7 1027 aaPredicted RBP14.72□□□□□ -0.05
DDX56-209ENST00000473924 TSPY2A6NKD2 308 aa14.71□□□□□ -0.05
DDX56-209ENST00000473924 C19orf81C9J6K1 198 aa14.71□□□□□ -0.05
DDX56-209ENST00000473924 BTBD19C9JJ37 291 aa14.71□□□□□ -0.05
DDX56-209ENST00000473924 RANBP6O60518 1105 aaKnown RBP14.71□□□□□ -0.05
DDX56-209ENST00000473924 TFAP4Q01664 338 aa14.71□□□□□ -0.05
DDX56-209ENST00000473924 ZYXQ15942 572 aaKnown RBP14.71□□□□□ -0.05
DDX56-209ENST00000473924 FAM47AQ5JRC9 791 aa14.71□□□□□ -0.05
DDX56-209ENST00000473924 AKNAD1Q5T1N1 836 aa14.71□□□□□ -0.05
DDX56-209ENST00000473924 FAM43AQ8N2R8 423 aa14.71□□□□□ -0.05
DDX56-209ENST00000473924 KANSL2Q9H9L4 492 aa14.71□□□□□ -0.05
DDX56-209ENST00000473924 INCENPQ9NQS7 918 aa14.71□□□□□ -0.05
DDX56-209ENST00000473924 TSKSQ9UJT2 592 aa14.71□□□□□ -0.05
DDX56-209ENST00000473924 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.71□□□□□ -0.05
DDX56-209ENST00000473924 FOXN1O15353 648 aa14.7□□□□□ -0.06
DDX56-209ENST00000473924 ORC4O43929 436 aa14.7□□□□□ -0.06
DDX56-209ENST00000473924 TBC1D8O95759 1140 aa14.7□□□□□ -0.06
DDX56-209ENST00000473924 PCP11498 1178 aaKnown RBP14.7□□□□□ -0.06
DDX56-209ENST00000473924 TAF1CQ15572 869 aaPredicted RBP14.7□□□□□ -0.06
DDX56-209ENST00000473924 SH3D19Q5HYK7 790 aa14.7□□□□□ -0.06
DDX56-209ENST00000473924 USP17L2Q6R6M4 530 aa14.7□□□□□ -0.06
DDX56-209ENST00000473924 ANKRD23Q86SG2 305 aa14.7□□□□□ -0.06
DDX56-209ENST00000473924 CLEC10AQ8IUN9 316 aa14.7□□□□□ -0.06
DDX56-209ENST00000473924 PROCA1Q8NCQ7 364 aaPredicted RBP14.7□□□□□ -0.06
DDX56-209ENST00000473924 ACER1Q8TDN7 264 aa14.7□□□□□ -0.06
DDX56-209ENST00000473924 STAG1Q8WVM7 1258 aa14.7□□□□□ -0.06
DDX56-209ENST00000473924 MAP4K1Q92918 833 aa14.7□□□□□ -0.06
DDX56-209ENST00000473924 SH2D4AQ9H788 454 aa14.7□□□□□ -0.06
DDX56-209ENST00000473924 GTF3C3Q9Y5Q9 886 aa14.7□□□□□ -0.06
DDX56-209ENST00000473924 PTPRFP10586 1907 aa14.69□□□□□ -0.06
DDX56-209ENST00000473924 PDHXO00330 501 aa14.69□□□□□ -0.06
DDX56-209ENST00000473924 EEF2P13639 858 aaKnown RBP14.69□□□□□ -0.06
DDX56-209ENST00000473924 CTCFP49711 727 aaPredicted RBP14.69□□□□□ -0.06
DDX56-209ENST00000473924 USP14P54578 494 aa14.69□□□□□ -0.06
DDX56-209ENST00000473924 MOGSQ13724 837 aa14.69□□□□□ -0.06
DDX56-209ENST00000473924 TBC1D10CQ8IV04 446 aa14.69□□□□□ -0.06
DDX56-209ENST00000473924 NEDD1Q8NHV4 660 aa14.69□□□□□ -0.06
DDX56-209ENST00000473924 LSG1Q9H089 658 aaKnown RBP14.69□□□□□ -0.06
DDX56-209ENST00000473924 NBPF3Q9H094 633 aa14.69□□□□□ -0.06
DDX56-209ENST00000473924 KIAA1683Q9H0B3 1180 aa14.69□□□□□ -0.06
DDX56-209ENST00000473924 ZFYVE28Q9HCC9 887 aa14.69□□□□□ -0.06
DDX56-209ENST00000473924 ZCCHC17Q9NP64 241 aaKnown RBP14.69□□□□□ -0.06
DDX56-209ENST00000473924 AGTPBP1Q9UPW5 1226 aa14.69□□□□□ -0.06
DDX56-209ENST00000473924 RBM8AQ9Y5S9 174 aaKnown RBP14.69□□□□□ -0.06
DDX56-209ENST00000473924 LAMA4Q16363 1823 aa14.69□□□□□ -0.06
DDX56-209ENST00000473924 RAD21O60216 631 aa14.68□□□□□ -0.06
DDX56-209ENST00000473924 FGRP09769 529 aa14.68□□□□□ -0.06
DDX56-209ENST00000473924 PABPC4Q13310 644 aaKnown RBP eCLIP14.68□□□□□ -0.06
DDX56-209ENST00000473924 DGKZQ13574 1117 aa14.68□□□□□ -0.06
DDX56-209ENST00000473924 GPAT2Q6NUI2 795 aa14.68□□□□□ -0.06
DDX56-209ENST00000473924 ESR2Q92731 530 aa14.68□□□□□ -0.06
DDX56-209ENST00000473924 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.68□□□□□ -0.06
DDX56-209ENST00000473924 TACC3Q9Y6A5 838 aa14.68□□□□□ -0.06
DDX56-209ENST00000473924 PCNTO95613 3336 aa14.67□□□□□ -0.06
DDX56-209ENST00000473924 A0A1W2PRG0 241 aa14.67□□□□□ -0.06
DDX56-209ENST00000473924 CYP21A2P08686 494 aa14.67□□□□□ -0.06
DDX56-209ENST00000473924 TRDNQ13061 729 aa14.67□□□□□ -0.06
DDX56-209ENST00000473924 CRHR2Q13324 411 aa14.67□□□□□ -0.06
DDX56-209ENST00000473924 PPP4R3BQ5MIZ7 849 aa14.67□□□□□ -0.06
DDX56-209ENST00000473924 TREML2Q5T2D2 321 aa14.67□□□□□ -0.06
DDX56-209ENST00000473924 CEP95Q96GE4 821 aa14.67□□□□□ -0.06
DDX56-209ENST00000473924 PARK7Q99497 189 aaKnown RBP14.67□□□□□ -0.06
DDX56-209ENST00000473924 KRT23Q9C075 422 aa14.67□□□□□ -0.06
DDX56-209ENST00000473924 CNNM2Q9H8M5 875 aa14.67□□□□□ -0.06
DDX56-209ENST00000473924 GOPCQ9HD26 462 aa14.67□□□□□ -0.06
DDX56-209ENST00000473924 EMILIN3Q9NT22 766 aa14.67□□□□□ -0.06
DDX56-209ENST00000473924 NYAP2Q9P242 653 aa14.67□□□□□ -0.06
DDX56-209ENST00000473924 CLIP2Q9UDT6 1046 aa14.67□□□□□ -0.06
DDX56-209ENST00000473924 PNMA3Q9UL41 463 aa14.67□□□□□ -0.06
DDX56-209ENST00000473924 TMX2Q9Y320 296 aa14.67□□□□□ -0.06
DDX56-209ENST00000473924 NEDD4P46934 1319 aa14.66□□□□□ -0.06
DDX56-209ENST00000473924 LOC285556D6RIA3 1793 aa14.66□□□□□ -0.06
DDX56-209ENST00000473924 PLIN4Q96Q06 1357 aa14.66□□□□□ -0.06
DDX56-209ENST00000473924 IGKV6D-41A0A0C4DH26 115 aa14.66□□□□□ -0.06
DDX56-209ENST00000473924 REC8O95072 547 aa14.66□□□□□ -0.06
DDX56-209ENST00000473924 TTLL1O95922 423 aa14.66□□□□□ -0.06
DDX56-209ENST00000473924 HSPA8P11142 646 aaKnown RBP14.66□□□□□ -0.06
DDX56-209ENST00000473924 OSBPP22059 807 aa14.66□□□□□ -0.06
DDX56-209ENST00000473924 NT5C2P49902 561 aa14.66□□□□□ -0.06
DDX56-209ENST00000473924 LBX1P52954 281 aa14.66□□□□□ -0.06
DDX56-209ENST00000473924 SIAH1Q8IUQ4 282 aa14.66□□□□□ -0.06
DDX56-209ENST00000473924 C12orf42Q96LP6 360 aa14.66□□□□□ -0.06
DDX56-209ENST00000473924 CFHR5Q9BXR6 569 aa14.66□□□□□ -0.06
DDX56-209ENST00000473924 MTMR4Q9NYA4 1195 aa14.66□□□□□ -0.06
DDX56-209ENST00000473924 STX8Q9UNK0 236 aa14.66□□□□□ -0.06
DDX56-209ENST00000473924 SLC45A1Q9Y2W3 748 aa14.66□□□□□ -0.06
DDX56-209ENST00000473924 GREB1LQ9C091 1923 aaPredicted RBP14.66□□□□□ -0.06
DDX56-209ENST00000473924 B4E1Z4 1266 aa14.65□□□□□ -0.06
DDX56-209ENST00000473924 KDM4AO75164 1064 aa14.65□□□□□ -0.06
DDX56-209ENST00000473924 CYP2C8P10632 490 aa14.65□□□□□ -0.06
DDX56-209ENST00000473924 VCAM1P19320 739 aa14.65□□□□□ -0.06
DDX56-209ENST00000473924 IRX3P78415 501 aaPredicted RBP14.65□□□□□ -0.06
DDX56-209ENST00000473924 RNF20Q5VTR2 975 aa14.65□□□□□ -0.06
DDX56-209ENST00000473924 RALYLQ86SE5 291 aaKnown RBP14.65□□□□□ -0.06
DDX56-209ENST00000473924 SMCR8Q8TEV9 937 aaPredicted RBP14.65□□□□□ -0.06
DDX56-209ENST00000473924 VCPKMTQ9H867 229 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms