RNA–Protein interactions for RNA: ENST00000473343.5

TNFRSF25-211, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 1,591 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-211ENST00000473343 USP2O75604 605 aaPredicted RBP22.22■■□□□ 1.15
TNFRSF25-211ENST00000473343 APOBRQ0VD83 1088 aa22.22■■□□□ 1.15
TNFRSF25-211ENST00000473343 SEPT2Q15019 361 aa22.22■■□□□ 1.15
TNFRSF25-211ENST00000473343 WRNIP1Q96S55 665 aa22.22■■□□□ 1.15
TNFRSF25-211ENST00000473343 KANSL2Q9H9L4 492 aa22.22■■□□□ 1.15
TNFRSF25-211ENST00000473343 MYH8P13535 1937 aa22.22■■□□□ 1.15
TNFRSF25-211ENST00000473343 KIF3CO14782 793 aa22.21■■□□□ 1.15
TNFRSF25-211ENST00000473343 PPP4R3BQ5MIZ7 849 aa22.21■■□□□ 1.15
TNFRSF25-211ENST00000473343 NFXL1Q6ZNB6 911 aa22.21■■□□□ 1.15
TNFRSF25-211ENST00000473343 GINM1Q9NU53 330 aa22.21■■□□□ 1.15
TNFRSF25-211ENST00000473343 BRPF3Q9ULD4 1205 aa22.21■■□□□ 1.15
TNFRSF25-211ENST00000473343 STX8Q9UNK0 236 aa22.21■■□□□ 1.15
TNFRSF25-211ENST00000473343 GREB1LQ9C091 1923 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF25-211ENST00000473343 K7ELQ4 463 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF25-211ENST00000473343 TTLL1O95922 423 aa22.21■■□□□ 1.15
TNFRSF25-211ENST00000473343 ASNSP08243 561 aa22.21■■□□□ 1.15
TNFRSF25-211ENST00000473343 INPP5BP32019 993 aa22.21■■□□□ 1.15
TNFRSF25-211ENST00000473343 PRKG1Q13976 671 aa22.21■■□□□ 1.15
TNFRSF25-211ENST00000473343 BECN1Q14457 450 aa22.21■■□□□ 1.15
TNFRSF25-211ENST00000473343 RAB3GAP1Q15042 981 aa22.21■■□□□ 1.15
TNFRSF25-211ENST00000473343 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.21■■□□□ 1.15
TNFRSF25-211ENST00000473343 KLF18A0A0U1RQI7 1052 aa22.2■■□□□ 1.14
TNFRSF25-211ENST00000473343 CCDC69A6NI79 296 aa22.2■■□□□ 1.14
TNFRSF25-211ENST00000473343 CLEC10AQ8IUN9 316 aa22.2■■□□□ 1.14
TNFRSF25-211ENST00000473343 ZNF274Q96GC6 653 aaPredicted RBP22.2■■□□□ 1.14
TNFRSF25-211ENST00000473343 ZSCAN31Q96LW9 406 aaPredicted RBP22.2■■□□□ 1.14
TNFRSF25-211ENST00000473343 TMEM47Q9BQJ4 181 aa22.2■■□□□ 1.14
TNFRSF25-211ENST00000473343 ITGBL1O95965 494 aaPredicted RBP22.19■■□□□ 1.14
TNFRSF25-211ENST00000473343 ICA1Q05084 483 aa22.19■■□□□ 1.14
TNFRSF25-211ENST00000473343 FMR1Q06787 632 aaKnown RBP eCLIP22.19■■□□□ 1.14
TNFRSF25-211ENST00000473343 MAP3K11Q16584 847 aa22.19■■□□□ 1.14
TNFRSF25-211ENST00000473343 ME3Q16798 604 aa22.19■■□□□ 1.14
TNFRSF25-211ENST00000473343 APOA5Q6Q788 366 aa22.19■■□□□ 1.14
TNFRSF25-211ENST00000473343 SCYL3Q8IZE3 742 aa22.19■■□□□ 1.14
TNFRSF25-211ENST00000473343 TMX3Q96JJ7 454 aa22.19■■□□□ 1.14
TNFRSF25-211ENST00000473343 NYAP2Q9P242 653 aa22.19■■□□□ 1.14
TNFRSF25-211ENST00000473343 SLC12A7Q9Y666 1083 aa22.19■■□□□ 1.14
TNFRSF25-211ENST00000473343 LARGE1O95461 756 aa22.18■■□□□ 1.14
TNFRSF25-211ENST00000473343 TOP1P11387 765 aaKnown RBP22.18■■□□□ 1.14
TNFRSF25-211ENST00000473343 YY1P25490 414 aa22.18■■□□□ 1.14
TNFRSF25-211ENST00000473343 PDIA3P30101 505 aaKnown RBP22.18■■□□□ 1.14
TNFRSF25-211ENST00000473343 IREB2P48200 963 aaKnown RBP22.18■■□□□ 1.14
TNFRSF25-211ENST00000473343 NOL9Q5SY16 702 aaKnown RBP22.18■■□□□ 1.14
TNFRSF25-211ENST00000473343 SIAH1Q8IUQ4 282 aa22.18■■□□□ 1.14
TNFRSF25-211ENST00000473343 ZKSCAN4Q969J2 545 aaPredicted RBP22.18■■□□□ 1.14
TNFRSF25-211ENST00000473343 KAT14Q9H8E8 782 aa22.18■■□□□ 1.14
TNFRSF25-211ENST00000473343 SH2B1Q9NRF2 756 aaPredicted RBP22.18■■□□□ 1.14
TNFRSF25-211ENST00000473343 CLIP2Q9UDT6 1046 aa22.18■■□□□ 1.14
TNFRSF25-211ENST00000473343 EEF2P13639 858 aaKnown RBP22.17■■□□□ 1.14
TNFRSF25-211ENST00000473343 MAP3K9P80192 1104 aa22.17■■□□□ 1.14
TNFRSF25-211ENST00000473343 CATIPQ7Z7H3 387 aa22.17■■□□□ 1.14
TNFRSF25-211ENST00000473343 ZNF654Q8IZM8 581 aa22.17■■□□□ 1.14
TNFRSF25-211ENST00000473343 SYNE3Q6ZMZ3 975 aa22.16■■□□□ 1.14
TNFRSF25-211ENST00000473343 MKL1Q969V6 931 aa22.16■■□□□ 1.14
TNFRSF25-211ENST00000473343 ZNF408Q9H9D4 720 aa22.16■■□□□ 1.14
TNFRSF25-211ENST00000473343 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.16■■□□□ 1.14
TNFRSF25-211ENST00000473343 NAP1L2Q9ULW6 460 aaPredicted RBP22.16■■□□□ 1.14
TNFRSF25-211ENST00000473343 GOLGA8BA8MQT2 603 aa22.16■■□□□ 1.14
TNFRSF25-211ENST00000473343 ZBTB43O43298 467 aa22.16■■□□□ 1.14
TNFRSF25-211ENST00000473343 RCAN1P53805 252 aa22.16■■□□□ 1.14
TNFRSF25-211ENST00000473343 TTLL12Q14166 644 aaPredicted RBP22.16■■□□□ 1.14
TNFRSF25-211ENST00000473343 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.16■■□□□ 1.14
TNFRSF25-211ENST00000473343 ARMC9Q7Z3E5 817 aa22.16■■□□□ 1.14
TNFRSF25-211ENST00000473343 PNMA1Q8ND90 353 aa22.16■■□□□ 1.14
TNFRSF25-211ENST00000473343 PICK1Q9NRD5 415 aa22.16■■□□□ 1.14
TNFRSF25-211ENST00000473343 HPS5Q9UPZ3 1129 aa22.16■■□□□ 1.14
TNFRSF25-211ENST00000473343 PFKFB2O60825 505 aa22.15■■□□□ 1.14
TNFRSF25-211ENST00000473343 DDAH1O94760 285 aa22.15■■□□□ 1.14
TNFRSF25-211ENST00000473343 ATP2B2Q01814 1243 aa22.15■■□□□ 1.14
TNFRSF25-211ENST00000473343 TROAPQ12815 778 aa22.15■■□□□ 1.14
TNFRSF25-211ENST00000473343 VGLL4Q14135 290 aa22.15■■□□□ 1.14
TNFRSF25-211ENST00000473343 MOB2Q70IA6 237 aa22.15■■□□□ 1.14
TNFRSF25-211ENST00000473343 MICU3Q86XE3 530 aa22.15■■□□□ 1.14
TNFRSF25-211ENST00000473343 LRRC47Q8N1G4 583 aaKnown RBP22.15■■□□□ 1.14
TNFRSF25-211ENST00000473343 MYL10Q9BUA6 226 aa22.15■■□□□ 1.14
TNFRSF25-211ENST00000473343 SLKQ9H2G2 1235 aaPredicted RBP22.15■■□□□ 1.14
TNFRSF25-211ENST00000473343 PTPRAP18433 802 aa22.14■■□□□ 1.13
TNFRSF25-211ENST00000473343 STK3Q13188 491 aa22.14■■□□□ 1.13
TNFRSF25-211ENST00000473343 ANKRD13AQ8IZ07 590 aa22.14■■□□□ 1.13
TNFRSF25-211ENST00000473343 ARHGEF10LQ9HCE6 1279 aa22.14■■□□□ 1.13
TNFRSF25-211ENST00000473343 SYNPO2Q9UMS6 1093 aa22.14■■□□□ 1.13
TNFRSF25-211ENST00000473343 CSADQ9Y600 493 aa22.14■■□□□ 1.13
TNFRSF25-211ENST00000473343 NID2Q14112 1375 aa22.14■■□□□ 1.13
TNFRSF25-211ENST00000473343 A0A1W2PRG0 241 aa22.13■■□□□ 1.13
TNFRSF25-211ENST00000473343 USP17L5A8MUK1 530 aa22.13■■□□□ 1.13
TNFRSF25-211ENST00000473343 CELF2O95319 508 aaKnown RBP22.13■■□□□ 1.13
TNFRSF25-211ENST00000473343 CALM1P0DP23 149 aa22.13■■□□□ 1.13
TNFRSF25-211ENST00000473343 CALM2P0DP24 149 aa22.13■■□□□ 1.13
TNFRSF25-211ENST00000473343 CALM3P0DP25 149 aa22.13■■□□□ 1.13
TNFRSF25-211ENST00000473343 FKBP1BP68106 108 aa22.13■■□□□ 1.13
TNFRSF25-211ENST00000473343 CCDC84Q86UT8 332 aaPredicted RBP22.13■■□□□ 1.13
TNFRSF25-211ENST00000473343 RAB11FIP4Q86YS3 637 aa22.13■■□□□ 1.13
TNFRSF25-211ENST00000473343 NECAB1Q8N987 351 aa22.13■■□□□ 1.13
TNFRSF25-211ENST00000473343 ZNF784Q8NCA9 323 aaPredicted RBP22.13■■□□□ 1.13
TNFRSF25-211ENST00000473343 SMC1BQ8NDV3 1235 aa22.13■■□□□ 1.13
TNFRSF25-211ENST00000473343 GTF3C6Q969F1 213 aa22.13■■□□□ 1.13
TNFRSF25-211ENST00000473343 SNCAIPQ9Y6H5 919 aa22.13■■□□□ 1.13
TNFRSF25-211ENST00000473343 PAPPA2Q9BXP8 1791 aa22.13■■□□□ 1.13
TNFRSF25-211ENST00000473343 RXRAP19793 462 aa22.12■■□□□ 1.13
TNFRSF25-211ENST00000473343 METAP2P50579 478 aaKnown RBP eCLIP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms