RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 ESR2Q92731 530 aa23.64■■□□□ 1.37
SF1-213ENST00000472725 SH2D4AQ9H788 454 aa23.64■■□□□ 1.37
SF1-213ENST00000472725 ZCCHC17Q9NP64 241 aaKnown RBP23.64■■□□□ 1.37
SF1-213ENST00000472725 SYNPO2Q9UMS6 1093 aa23.64■■□□□ 1.37
SF1-213ENST00000472725 IGKV6D-41A0A0C4DH26 115 aa23.63■■□□□ 1.37
SF1-213ENST00000472725 TSPY2A6NKD2 308 aa23.63■■□□□ 1.37
SF1-213ENST00000472725 USP14P54578 494 aa23.63■■□□□ 1.37
SF1-213ENST00000472725 BACE1P56817 501 aa23.63■■□□□ 1.37
SF1-213ENST00000472725 TFAP4Q01664 338 aa23.63■■□□□ 1.37
SF1-213ENST00000472725 TRDNQ13061 729 aa23.63■■□□□ 1.37
SF1-213ENST00000472725 MKRN3Q13064 507 aaKnown RBP23.63■■□□□ 1.37
SF1-213ENST00000472725 OTUD7BQ6GQQ9 843 aa23.63■■□□□ 1.37
SF1-213ENST00000472725 ARHGEF10LQ9HCE6 1279 aa23.63■■□□□ 1.37
SF1-213ENST00000472725 TOMM22Q9NS69 142 aa23.63■■□□□ 1.37
SF1-213ENST00000472725 TCP11L1Q9NUJ3 509 aa23.63■■□□□ 1.37
SF1-213ENST00000472725 RANBP6O60518 1105 aaKnown RBP23.62■■□□□ 1.37
SF1-213ENST00000472725 ALDH1A1P00352 501 aa23.62■■□□□ 1.37
SF1-213ENST00000472725 ICA1Q05084 483 aa23.62■■□□□ 1.37
SF1-213ENST00000472725 SHROOM1Q2M3G4 852 aaPredicted RBP23.62■■□□□ 1.37
SF1-213ENST00000472725 PROCA1Q8NCQ7 364 aaPredicted RBP23.62■■□□□ 1.37
SF1-213ENST00000472725 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.62■■□□□ 1.37
SF1-213ENST00000472725 KIAA1683Q9H0B3 1180 aa23.62■■□□□ 1.37
SF1-213ENST00000472725 NYAP2Q9P242 653 aa23.62■■□□□ 1.37
SF1-213ENST00000472725 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.62■■□□□ 1.37
SF1-213ENST00000472725 TACC3Q9Y6A5 838 aa23.62■■□□□ 1.37
SF1-213ENST00000472725 CCL15-CCL14A0A0B4J2E2 113 aa23.61■■□□□ 1.37
SF1-213ENST00000472725 TRIM75PA6NK02 468 aa23.61■■□□□ 1.37
SF1-213ENST00000472725 CCL15Q16663 113 aa23.61■■□□□ 1.37
SF1-213ENST00000472725 CCDC178Q5BJE1 867 aa23.61■■□□□ 1.37
SF1-213ENST00000472725 SLC27A2O14975 620 aa23.6■■□□□ 1.37
SF1-213ENST00000472725 TSGA10IPQ3SY00 556 aa23.6■■□□□ 1.37
SF1-213ENST00000472725 RRP12Q5JTH9 1297 aaKnown RBP23.6■■□□□ 1.37
SF1-213ENST00000472725 CREB3L3Q68CJ9 461 aa23.6■■□□□ 1.37
SF1-213ENST00000472725 USP17L2Q6R6M4 530 aa23.6■■□□□ 1.37
SF1-213ENST00000472725 CCDC84Q86UT8 332 aaPredicted RBP23.6■■□□□ 1.37
SF1-213ENST00000472725 C12orf42Q96LP6 360 aa23.6■■□□□ 1.37
SF1-213ENST00000472725 ZIC5Q96T25 663 aa23.6■■□□□ 1.37
SF1-213ENST00000472725 INCENPQ9NQS7 918 aa23.6■■□□□ 1.37
SF1-213ENST00000472725 MTMR4Q9NYA4 1195 aa23.6■■□□□ 1.37
SF1-213ENST00000472725 SLC45A1Q9Y2W3 748 aa23.6■■□□□ 1.37
SF1-213ENST00000472725 TMX2Q9Y320 296 aa23.6■■□□□ 1.37
SF1-213ENST00000472725 LOC285556D6RIA3 1793 aa23.6■■□□□ 1.37
SF1-213ENST00000472725 NEDD4P46934 1319 aa23.59■■□□□ 1.37
SF1-213ENST00000472725 CA12O43570 354 aa23.59■■□□□ 1.37
SF1-213ENST00000472725 ZKSCAN1P17029 563 aaPredicted RBP23.59■■□□□ 1.37
SF1-213ENST00000472725 NOVP48745 357 aa23.59■■□□□ 1.37
SF1-213ENST00000472725 FAM47AQ5JRC9 791 aa23.59■■□□□ 1.37
SF1-213ENST00000472725 ANKRD23Q86SG2 305 aa23.59■■□□□ 1.37
SF1-213ENST00000472725 IFNL1Q8IU54 200 aa23.59■■□□□ 1.37
SF1-213ENST00000472725 NCOA7Q8NI08 942 aa23.59■■□□□ 1.37
SF1-213ENST00000472725 BRI3BPQ8WY22 251 aa23.59■■□□□ 1.37
SF1-213ENST00000472725 MKL1Q969V6 931 aa23.59■■□□□ 1.37
SF1-213ENST00000472725 FEZ1Q99689 392 aa23.59■■□□□ 1.37
SF1-213ENST00000472725 TMOD4Q9NZQ9 345 aa23.59■■□□□ 1.37
SF1-213ENST00000472725 E7EWF7 191 aa23.58■■□□□ 1.37
SF1-213ENST00000472725 TTLL1O95922 423 aa23.58■■□□□ 1.37
SF1-213ENST00000472725 EEF2P13639 858 aaKnown RBP23.58■■□□□ 1.37
SF1-213ENST00000472725 MTMR2Q13614 643 aa23.58■■□□□ 1.37
SF1-213ENST00000472725 KRT32Q14532 448 aa23.58■■□□□ 1.37
SF1-213ENST00000472725 IQCA1Q86XH1 822 aa23.58■■□□□ 1.37
SF1-213ENST00000472725 SIAH1Q8IUQ4 282 aa23.58■■□□□ 1.37
SF1-213ENST00000472725 KCNB2Q92953 911 aa23.58■■□□□ 1.37
SF1-213ENST00000472725 CEP95Q96GE4 821 aa23.58■■□□□ 1.37
SF1-213ENST00000472725 TTC14Q96N46 770 aa23.58■■□□□ 1.37
SF1-213ENST00000472725 BEGAINQ9BUH8 593 aa23.58■■□□□ 1.37
SF1-213ENST00000472725 SAGE1Q9NXZ1 904 aa23.58■■□□□ 1.37
SF1-213ENST00000472725 HSPA4P34932 840 aa23.57■■□□□ 1.36
SF1-213ENST00000472725 PABPC4Q13310 644 aaKnown RBP eCLIP23.57■■□□□ 1.36
SF1-213ENST00000472725 MOGSQ13724 837 aa23.57■■□□□ 1.36
SF1-213ENST00000472725 RALYLQ86SE5 291 aaKnown RBP23.57■■□□□ 1.36
SF1-213ENST00000472725 LPAR1Q92633 364 aa23.57■■□□□ 1.36
SF1-213ENST00000472725 USP26Q9BXU7 913 aa23.57■■□□□ 1.36
SF1-213ENST00000472725 WBP1LQ9NX94 342 aa23.57■■□□□ 1.36
SF1-213ENST00000472725 MYH4Q9Y623 1939 aa23.57■■□□□ 1.36
SF1-213ENST00000472725 B4E1Z4 1266 aa23.56■■□□□ 1.36
SF1-213ENST00000472725 KDM4AO75164 1064 aa23.56■■□□□ 1.36
SF1-213ENST00000472725 MCCP23508 829 aa23.56■■□□□ 1.36
SF1-213ENST00000472725 HMGCS2P54868 508 aa23.56■■□□□ 1.36
SF1-213ENST00000472725 ACER1Q8TDN7 264 aa23.56■■□□□ 1.36
SF1-213ENST00000472725 PTPN18Q99952 460 aa23.56■■□□□ 1.36
SF1-213ENST00000472725 MTA3Q9BTC8 594 aa23.56■■□□□ 1.36
SF1-213ENST00000472725 CFHR5Q9BXR6 569 aa23.56■■□□□ 1.36
SF1-213ENST00000472725 IL17RBQ9NRM6 502 aa23.56■■□□□ 1.36
SF1-213ENST00000472725 ZSWIM5Q9P217 1185 aa23.56■■□□□ 1.36
SF1-213ENST00000472725 AGTPBP1Q9UPW5 1226 aa23.56■■□□□ 1.36
SF1-213ENST00000472725 A0A1W2PRG0 241 aa23.55■■□□□ 1.36
SF1-213ENST00000472725 BTBD19C9JJ37 291 aa23.55■■□□□ 1.36
SF1-213ENST00000472725 DGKHQ86XP1 1220 aa23.55■■□□□ 1.36
SF1-213ENST00000472725 VCPKMTQ9H867 229 aa23.55■■□□□ 1.36
SF1-213ENST00000472725 GOPCQ9HD26 462 aa23.55■■□□□ 1.36
SF1-213ENST00000472725 IGF2BP3O00425 579 aaKnown RBP eCLIP23.54■■□□□ 1.36
SF1-213ENST00000472725 C8orf34Q49A92 452 aa23.54■■□□□ 1.36
SF1-213ENST00000472725 GPAT2Q6NUI2 795 aa23.54■■□□□ 1.36
SF1-213ENST00000472725 GADL1Q6ZQY3 521 aa23.54■■□□□ 1.36
SF1-213ENST00000472725 EMILIN3Q9NT22 766 aa23.54■■□□□ 1.36
SF1-213ENST00000472725 CLIP2Q9UDT6 1046 aa23.54■■□□□ 1.36
SF1-213ENST00000472725 HOXA7P31268 230 aaPredicted RBP23.53■■□□□ 1.36
SF1-213ENST00000472725 ATP2B2Q01814 1243 aa23.53■■□□□ 1.36
SF1-213ENST00000472725 STOX1Q6ZVD7 989 aa23.53■■□□□ 1.36
SF1-213ENST00000472725 GMCL1P1Q8NEA9 526 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms