RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 FGRP09769 529 aa17.93■□□□□ 0.46
SNX13-205ENST00000471744 GUCY1A2P33402 732 aa17.93■□□□□ 0.46
SNX13-205ENST00000471744 USP14P54578 494 aa17.93■□□□□ 0.46
SNX13-205ENST00000471744 SEPT2Q15019 361 aa17.93■□□□□ 0.46
SNX13-205ENST00000471744 IMMTQ16891 758 aaKnown RBP17.93■□□□□ 0.46
SNX13-205ENST00000471744 PPP4R3BQ5MIZ7 849 aa17.93■□□□□ 0.46
SNX13-205ENST00000471744 STK11IPQ8N1F8 1099 aa17.93■□□□□ 0.46
SNX13-205ENST00000471744 FEZ1Q99689 392 aa17.93■□□□□ 0.46
SNX13-205ENST00000471744 PTPN18Q99952 460 aa17.93■□□□□ 0.46
SNX13-205ENST00000471744 SH2D4AQ9H788 454 aa17.93■□□□□ 0.46
SNX13-205ENST00000471744 KANSL2Q9H9L4 492 aa17.93■□□□□ 0.46
SNX13-205ENST00000471744 ARHGEF10LQ9HCE6 1279 aa17.93■□□□□ 0.46
SNX13-205ENST00000471744 TMOD4Q9NZQ9 345 aa17.93■□□□□ 0.46
SNX13-205ENST00000471744 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.93■□□□□ 0.46
SNX13-205ENST00000471744 SLC45A1Q9Y2W3 748 aa17.93■□□□□ 0.46
SNX13-205ENST00000471744 U3KPZ7 1027 aaPredicted RBP17.93■□□□□ 0.46
SNX13-205ENST00000471744 PLIN4Q96Q06 1357 aa17.92■□□□□ 0.46
SNX13-205ENST00000471744 MYH4Q9Y623 1939 aa17.92■□□□□ 0.46
SNX13-205ENST00000471744 BTBD19C9JJ37 291 aa17.92■□□□□ 0.46
SNX13-205ENST00000471744 ICA1Q05084 483 aa17.92■□□□□ 0.46
SNX13-205ENST00000471744 CTDSPL2Q05D32 466 aa17.92■□□□□ 0.46
SNX13-205ENST00000471744 MTMR2Q13614 643 aa17.92■□□□□ 0.46
SNX13-205ENST00000471744 SHROOM1Q2M3G4 852 aaPredicted RBP17.92■□□□□ 0.46
SNX13-205ENST00000471744 USP17L2Q6R6M4 530 aa17.92■□□□□ 0.46
SNX13-205ENST00000471744 GADL1Q6ZQY3 521 aa17.92■□□□□ 0.46
SNX13-205ENST00000471744 KIAA1683Q9H0B3 1180 aa17.92■□□□□ 0.46
SNX13-205ENST00000471744 FOXN1O15353 648 aa17.91■□□□□ 0.46
SNX13-205ENST00000471744 PRDM1O75626 825 aa17.91■□□□□ 0.46
SNX13-205ENST00000471744 TSPY3P0CV98 308 aa17.91■□□□□ 0.46
SNX13-205ENST00000471744 TSPY8P0CW00 308 aa17.91■□□□□ 0.46
SNX13-205ENST00000471744 HMGCS2P54868 508 aa17.91■□□□□ 0.46
SNX13-205ENST00000471744 PABPC4Q13310 644 aaKnown RBP eCLIP17.91■□□□□ 0.46
SNX13-205ENST00000471744 MOGSQ13724 837 aa17.91■□□□□ 0.46
SNX13-205ENST00000471744 AKNAD1Q5T1N1 836 aa17.91■□□□□ 0.46
SNX13-205ENST00000471744 MFSD6Q6ZSS7 791 aa17.91■□□□□ 0.46
SNX13-205ENST00000471744 STAG1Q8WVM7 1258 aa17.91■□□□□ 0.46
SNX13-205ENST00000471744 AGTPBP1Q9UPW5 1226 aa17.91■□□□□ 0.46
SNX13-205ENST00000471744 HAND2P61296 217 aa17.9■□□□□ 0.46
SNX13-205ENST00000471744 TAF1CQ15572 869 aaPredicted RBP17.9■□□□□ 0.46
SNX13-205ENST00000471744 NOM1Q5C9Z4 860 aaKnown RBP17.9■□□□□ 0.46
SNX13-205ENST00000471744 FAM43AQ8N2R8 423 aa17.9■□□□□ 0.46
SNX13-205ENST00000471744 NEDD1Q8NHV4 660 aa17.9■□□□□ 0.46
SNX13-205ENST00000471744 C12orf42Q96LP6 360 aa17.9■□□□□ 0.46
SNX13-205ENST00000471744 ZFYVE28Q9HCC9 887 aa17.9■□□□□ 0.46
SNX13-205ENST00000471744 PNMA3Q9UL41 463 aa17.9■□□□□ 0.46
SNX13-205ENST00000471744 TSPY2A6NKD2 308 aa17.89■□□□□ 0.45
SNX13-205ENST00000471744 PDHXO00330 501 aa17.89■□□□□ 0.45
SNX13-205ENST00000471744 TFAP4Q01664 338 aa17.89■□□□□ 0.45
SNX13-205ENST00000471744 PTH1RQ03431 593 aa17.89■□□□□ 0.45
SNX13-205ENST00000471744 MAP4K1Q92918 833 aa17.89■□□□□ 0.45
SNX13-205ENST00000471744 PARK7Q99497 189 aaKnown RBP17.89■□□□□ 0.45
SNX13-205ENST00000471744 RNF39Q9H2S5 420 aa17.89■□□□□ 0.45
SNX13-205ENST00000471744 TOMM22Q9NS69 142 aa17.89■□□□□ 0.45
SNX13-205ENST00000471744 NYAP2Q9P242 653 aa17.89■□□□□ 0.45
SNX13-205ENST00000471744 SYNPO2Q9UMS6 1093 aa17.89■□□□□ 0.45
SNX13-205ENST00000471744 RANBP6O60518 1105 aaKnown RBP17.88■□□□□ 0.45
SNX13-205ENST00000471744 HSPA8P11142 646 aaKnown RBP17.88■□□□□ 0.45
SNX13-205ENST00000471744 GPAT2Q6NUI2 795 aa17.88■□□□□ 0.45
SNX13-205ENST00000471744 CNNM2Q9H8M5 875 aa17.88■□□□□ 0.45
SNX13-205ENST00000471744 ANO2Q9NQ90 1003 aa17.88■□□□□ 0.45
SNX13-205ENST00000471744 TMX2Q9Y320 296 aa17.88■□□□□ 0.45
SNX13-205ENST00000471744 IGKV6D-41A0A0C4DH26 115 aa17.87■□□□□ 0.45
SNX13-205ENST00000471744 EEF2P13639 858 aaKnown RBP17.87■□□□□ 0.45
SNX13-205ENST00000471744 CRHR2Q13324 411 aa17.87■□□□□ 0.45
SNX13-205ENST00000471744 RRP12Q5JTH9 1297 aaKnown RBP17.87■□□□□ 0.45
SNX13-205ENST00000471744 TBC1D10CQ8IV04 446 aa17.87■□□□□ 0.45
SNX13-205ENST00000471744 ACER1Q8TDN7 264 aa17.87■□□□□ 0.45
SNX13-205ENST00000471744 LPAR1Q92633 364 aa17.87■□□□□ 0.45
SNX13-205ENST00000471744 ESR2Q92731 530 aa17.87■□□□□ 0.45
SNX13-205ENST00000471744 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.87■□□□□ 0.45
SNX13-205ENST00000471744 KRT23Q9C075 422 aa17.87■□□□□ 0.45
SNX13-205ENST00000471744 LSG1Q9H089 658 aaKnown RBP17.87■□□□□ 0.45
SNX13-205ENST00000471744 NBPF3Q9H094 633 aa17.87■□□□□ 0.45
SNX13-205ENST00000471744 MTMR4Q9NYA4 1195 aa17.87■□□□□ 0.45
SNX13-205ENST00000471744 CASP8AP2Q9UKL3 1982 aa17.87■□□□□ 0.45
SNX13-205ENST00000471744 PCNTO95613 3336 aa17.87■□□□□ 0.45
SNX13-205ENST00000471744 TBC1D8O95759 1140 aa17.86■□□□□ 0.45
SNX13-205ENST00000471744 TTLL1O95922 423 aa17.86■□□□□ 0.45
SNX13-205ENST00000471744 OSBPP22059 807 aa17.86■□□□□ 0.45
SNX13-205ENST00000471744 HOXA7P31268 230 aaPredicted RBP17.86■□□□□ 0.45
SNX13-205ENST00000471744 ATP2B2Q01814 1243 aa17.86■□□□□ 0.45
SNX13-205ENST00000471744 FAM47AQ5JRC9 791 aa17.86■□□□□ 0.45
SNX13-205ENST00000471744 CEP95Q96GE4 821 aa17.86■□□□□ 0.45
SNX13-205ENST00000471744 GOPCQ9HD26 462 aa17.86■□□□□ 0.45
SNX13-205ENST00000471744 PRDM10Q9NQV6 1147 aa17.86■□□□□ 0.45
SNX13-205ENST00000471744 EMILIN3Q9NT22 766 aa17.86■□□□□ 0.45
SNX13-205ENST00000471744 TCP11L1Q9NUJ3 509 aa17.86■□□□□ 0.45
SNX13-205ENST00000471744 RBM8AQ9Y5S9 174 aaKnown RBP17.86■□□□□ 0.45
SNX13-205ENST00000471744 A0A1W2PRG0 241 aa17.85■□□□□ 0.45
SNX13-205ENST00000471744 TLR2O60603 784 aa17.85■□□□□ 0.45
SNX13-205ENST00000471744 REC8O95072 547 aa17.85■□□□□ 0.45
SNX13-205ENST00000471744 LBX1P52954 281 aa17.85■□□□□ 0.45
SNX13-205ENST00000471744 IRX3P78415 501 aaPredicted RBP17.85■□□□□ 0.45
SNX13-205ENST00000471744 TRDNQ13061 729 aa17.85■□□□□ 0.45
SNX13-205ENST00000471744 ZYXQ15942 572 aaKnown RBP17.85■□□□□ 0.45
SNX13-205ENST00000471744 CCDC178Q5BJE1 867 aa17.85■□□□□ 0.45
SNX13-205ENST00000471744 TREML2Q5T2D2 321 aa17.85■□□□□ 0.45
SNX13-205ENST00000471744 SIAH1Q8IUQ4 282 aa17.85■□□□□ 0.45
SNX13-205ENST00000471744 MKL1Q969V6 931 aa17.85■□□□□ 0.45
SNX13-205ENST00000471744 VCPKMTQ9H867 229 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms