RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 C8orf74Q6P047 294 aa14.64□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 DHX32Q7L7V1 743 aaKnown RBP14.64□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 NLRX1Q86UT6 975 aa14.64□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 HVCN1Q96D96 273 aa14.64□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 PRIM1P49642 420 aaKnown RBP14.64□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 SLC12A1Q13621 1099 aa14.64□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 SMYD2Q9NRG4 433 aa14.64□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 DLGAP5Q15398 846 aa14.64□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 MYLK4Q86YV6 388 aaPredicted RBP14.64□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 ANKRD35Q8N283 1001 aa14.64□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 CYP2J2P51589 502 aa14.64□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 TRIM35Q9UPQ4 493 aa14.63□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 A0A1B0GUL7 405 aa14.63□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 RAP1GDS1P52306 607 aa14.63□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 CTDSPL2Q05D32 466 aa14.63□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 NCAPG2Q86XI2 1143 aa14.63□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 KLHDC4Q8TBB5 520 aa14.63□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 ABCB4P21439 1286 aa14.63□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 KAZNQ674X7 775 aa14.63□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 ABI1Q8IZP0 508 aa14.63□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 SNAPC4Q5SXM2 1469 aa14.63□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 CEP104O60308 925 aa14.63□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 MKRN3Q13064 507 aaKnown RBP14.63□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 ADAT2Q7Z6V5 191 aaKnown RBP14.63□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 TRIM50Q86XT4 487 aa14.63□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 TROQ12816 1431 aaPredicted RBP14.63□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 SPDYE1Q8NFV5 336 aaPredicted RBP14.63□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 NOS1P29475 1434 aa14.63□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 NESP48681 1621 aa14.63□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 ZNF853P0CG23 659 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 XPAP23025 273 aaPredicted RBP14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 UVSSAQ2YD98 709 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 TTC31Q49AM3 519 aaPredicted RBP14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 NME8Q8N427 588 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 DAPK1P53355 1430 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 NCKAP5LQ9HCH0 1330 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 PPP2R3AQ06190 1150 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 CNGA4Q8IV77 575 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 EHBP1L1Q8N3D4 1523 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 FRMPD2Q68DX3 1309 aaPredicted RBP14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 MAP7Q14244 749 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 VSIG1Q86XK7 387 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 CACNA2D3Q8IZS8 1091 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 RBSNQ9H1K0 784 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 SMIM24O75264 130 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 MX2P20592 715 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 FAM180AQ6UWF9 173 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 STK38LQ9Y2H1 464 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 ATF7P17544 494 aaPredicted RBP14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 PLCD1P51178 756 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 RUFY3Q7L099 469 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 VPS37BQ9H9H4 285 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 TCP10L2B9ZVM9 353 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 BCRP11274 1271 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 NBPF11Q86T75 865 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 DEPTORQ8TB45 409 aa14.62□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 ADGRL1O94910 1474 aa14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 KLHL40Q2TBA0 621 aa14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 PRKAG2Q9UGJ0 569 aa14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 DLATP10515 647 aaKnown RBP14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 KRT33BQ14525 404 aa14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 ALAS1P13196 640 aa14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 HP1BP3Q5SSJ5 553 aaPredicted RBP14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 DKC1O60832 514 aaKnown RBP eCLIP14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 RMDN2Q96LZ7 410 aa14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 BNIP3LO60238 219 aa14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 GTF2IP78347 998 aa14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 TBCCQ15814 346 aa14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 TMEM259Q4ZIN3 620 aa14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 FAM47AQ5JRC9 791 aa14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 RSRC1Q96IZ7 334 aaKnown RBP14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 KRT12Q99456 494 aa14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 LMCD1Q9NZU5 365 aa14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 NOP14P78316 857 aaKnown RBP14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 PDCD2Q16342 344 aaPredicted RBP14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 MRPL46Q9H2W6 279 aaKnown RBP14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 NLRC4Q9NPP4 1024 aa14.61□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 GAS7O60861 476 aa14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 P4HA1P13674 534 aa14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 ARFGAP2Q8N6H7 521 aa14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 PPP4R1Q8TF05 950 aa14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 GDAP1L1Q96MZ0 367 aa14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 EFCC1Q9HA90 598 aa14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 PNMA2Q9UL42 364 aa14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 CMTR1Q8N1G2 835 aaKnown RBP14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 CCDC94Q9BW85 323 aaPredicted RBP14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 VGLL3A8MV65 326 aa14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 SCNN1DP51172 638 aa14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 SND1Q7KZF4 910 aaKnown RBP eCLIP14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 CXorf38Q8TB03 319 aa14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 PRIMPOLQ96LW4 560 aa14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 NUCKS1Q9H1E3 243 aaKnown RBP14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 CCDC68Q9H2F9 335 aa14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 PUM3Q15397 648 aaKnown RBP14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 GANCQ8TET4 914 aa14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 ZC4H2Q9NQZ6 224 aa14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 DDX21Q9NR30 783 aaKnown RBP eCLIP14.6□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 SLC5A4Q9NY91 659 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms