RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 MBD4O95243 580 aa16.24■□□□□ 0.19
HMGN1-211ENST00000471260 CCL5P13501 91 aa16.24■□□□□ 0.19
HMGN1-211ENST00000471260 GJA8P48165 433 aa16.24■□□□□ 0.19
HMGN1-211ENST00000471260 USP17L24Q0WX57 530 aa16.24■□□□□ 0.19
HMGN1-211ENST00000471260 LRRFIP1Q32MZ4 808 aaKnown RBP16.24■□□□□ 0.19
HMGN1-211ENST00000471260 KBTBD3Q8NAB2 608 aa16.24■□□□□ 0.19
HMGN1-211ENST00000471260 PCDHB15Q9Y5E8 787 aa16.24■□□□□ 0.19
HMGN1-211ENST00000471260 TTC41PQ6P2S7 1318 aa16.23■□□□□ 0.19
HMGN1-211ENST00000471260 DOCK3Q8IZD9 2030 aa16.23■□□□□ 0.19
HMGN1-211ENST00000471260 MYCP01106 439 aaPredicted RBP16.23■□□□□ 0.19
HMGN1-211ENST00000471260 ZFYP08048 801 aaPredicted RBP16.23■□□□□ 0.19
HMGN1-211ENST00000471260 TMEM179Q6ZVK1 233 aa16.23■□□□□ 0.19
HMGN1-211ENST00000471260 CCDC17Q96LX7 622 aa16.23■□□□□ 0.19
HMGN1-211ENST00000471260 RNF208Q9H0X6 261 aa16.23■□□□□ 0.19
HMGN1-211ENST00000471260 RBPJLQ9UBG7 517 aa16.23■□□□□ 0.19
HMGN1-211ENST00000471260 GJD2Q9UKL4 321 aa16.23■□□□□ 0.19
HMGN1-211ENST00000471260 MKI67P46013 3256 aaKnown RBP16.22■□□□□ 0.19
HMGN1-211ENST00000471260 MYH7P12883 1935 aa16.22■□□□□ 0.19
HMGN1-211ENST00000471260 ERC2O15083 957 aa16.22■□□□□ 0.19
HMGN1-211ENST00000471260 PRKAB2O43741 272 aa16.22■□□□□ 0.19
HMGN1-211ENST00000471260 MAPK4P31152 587 aa16.22■□□□□ 0.19
HMGN1-211ENST00000471260 GUCY1A2P33402 732 aa16.22■□□□□ 0.19
HMGN1-211ENST00000471260 ERVK-9P63128 1117 aa16.22■□□□□ 0.19
HMGN1-211ENST00000471260 ERVK-24P63145 666 aa16.22■□□□□ 0.19
HMGN1-211ENST00000471260 AAMPQ13685 434 aa16.22■□□□□ 0.19
HMGN1-211ENST00000471260 SEPT2Q15019 361 aa16.22■□□□□ 0.19
HMGN1-211ENST00000471260 C12orf60Q5U649 245 aa16.22■□□□□ 0.19
HMGN1-211ENST00000471260 GIMAP6Q6P9H5 292 aa16.22■□□□□ 0.19
HMGN1-211ENST00000471260 LBX2Q6XYB7 198 aa16.22■□□□□ 0.19
HMGN1-211ENST00000471260 CATSPERGQ6ZRH7 1159 aa16.22■□□□□ 0.19
HMGN1-211ENST00000471260 PUS7LQ9H0K6 701 aaKnown RBP16.22■□□□□ 0.19
HMGN1-211ENST00000471260 TXNRD2Q9NNW7 524 aa16.22■□□□□ 0.19
HMGN1-211ENST00000471260 SLC4A4Q9Y6R1 1079 aa16.22■□□□□ 0.19
HMGN1-211ENST00000471260 USP17L12C9JPN9 530 aa16.21■□□□□ 0.19
HMGN1-211ENST00000471260 USP17L21D6R901 530 aa16.21■□□□□ 0.19
HMGN1-211ENST00000471260 MPHOSPH10O00566 681 aaKnown RBP16.21■□□□□ 0.19
HMGN1-211ENST00000471260 INHAP05111 366 aa16.21■□□□□ 0.19
HMGN1-211ENST00000471260 VCAM1P19320 739 aa16.21■□□□□ 0.19
HMGN1-211ENST00000471260 ZYXQ15942 572 aaKnown RBP16.21■□□□□ 0.19
HMGN1-211ENST00000471260 SLFNL1Q499Z3 407 aa16.21■□□□□ 0.19
HMGN1-211ENST00000471260 ACER1Q8TDN7 264 aa16.21■□□□□ 0.19
HMGN1-211ENST00000471260 SOCS4Q8WXH5 440 aa16.21■□□□□ 0.19
HMGN1-211ENST00000471260 APPBP2Q92624 585 aa16.21■□□□□ 0.19
HMGN1-211ENST00000471260 NUDT12Q9BQG2 462 aa16.21■□□□□ 0.19
HMGN1-211ENST00000471260 ARPP21Q9UBL0 812 aaPredicted RBP16.21■□□□□ 0.19
HMGN1-211ENST00000471260 RABGAP1Q9Y3P9 1069 aa16.21■□□□□ 0.19
HMGN1-211ENST00000471260 RNF113AO15541 343 aaKnown RBP16.2■□□□□ 0.18
HMGN1-211ENST00000471260 GLRX3O76003 335 aaKnown RBP16.2■□□□□ 0.18
HMGN1-211ENST00000471260 SGPL1O95470 568 aa16.2■□□□□ 0.18
HMGN1-211ENST00000471260 HMGCRP04035 888 aa16.2■□□□□ 0.18
HMGN1-211ENST00000471260 CYP2D6P10635 497 aa16.2■□□□□ 0.18
HMGN1-211ENST00000471260 XRCC5P13010 732 aaKnown RBP16.2■□□□□ 0.18
HMGN1-211ENST00000471260 ELNP15502 786 aa16.2■□□□□ 0.18
HMGN1-211ENST00000471260 CCNA1P78396 465 aa16.2■□□□□ 0.18
HMGN1-211ENST00000471260 C16orf86Q6ZW13 317 aa16.2■□□□□ 0.18
HMGN1-211ENST00000471260 CCAR1Q8IX12 1150 aaKnown RBP16.2■□□□□ 0.18
HMGN1-211ENST00000471260 GCC1Q96CN9 775 aa16.2■□□□□ 0.18
HMGN1-211ENST00000471260 STRBPQ96SI9 672 aaKnown RBP16.2■□□□□ 0.18
HMGN1-211ENST00000471260 UNC93B1Q9H1C4 597 aa16.2■□□□□ 0.18
HMGN1-211ENST00000471260 GNAT2P19087 354 aa16.19■□□□□ 0.18
HMGN1-211ENST00000471260 CDK8P49336 464 aa16.19■□□□□ 0.18
HMGN1-211ENST00000471260 EVX2Q03828 476 aa16.19■□□□□ 0.18
HMGN1-211ENST00000471260 Q3C1V9 767 aa16.19■□□□□ 0.18
HMGN1-211ENST00000471260 SBK1Q52WX2 424 aa16.19■□□□□ 0.18
HMGN1-211ENST00000471260 CTR9Q6PD62 1173 aa16.19■□□□□ 0.18
HMGN1-211ENST00000471260 TRMT44Q8IYL2 757 aaKnown RBP16.19■□□□□ 0.18
HMGN1-211ENST00000471260 U2AF1L4Q8WU68 220 aaKnown RBP16.19■□□□□ 0.18
HMGN1-211ENST00000471260 LPAR1Q92633 364 aa16.19■□□□□ 0.18
HMGN1-211ENST00000471260 SHISA4Q96DD7 197 aa16.19■□□□□ 0.18
HMGN1-211ENST00000471260 DYNLL2Q96FJ2 89 aa16.19■□□□□ 0.18
HMGN1-211ENST00000471260 SH2D4AQ9H788 454 aa16.19■□□□□ 0.18
HMGN1-211ENST00000471260 ARHGEF10LQ9HCE6 1279 aa16.19■□□□□ 0.18
HMGN1-211ENST00000471260 PAK6Q9NQU5 681 aaPredicted RBP16.19■□□□□ 0.18
HMGN1-211ENST00000471260 HOXC10Q9NYD6 342 aa16.19■□□□□ 0.18
HMGN1-211ENST00000471260 ZBTB47Q9UFB7 747 aaPredicted RBP16.19■□□□□ 0.18
HMGN1-211ENST00000471260 RBM19Q9Y4C8 960 aaKnown RBP16.19■□□□□ 0.18
HMGN1-211ENST00000471260 A0A1W2PRG0 241 aa16.18■□□□□ 0.18
HMGN1-211ENST00000471260 CHGBP05060 677 aa16.18■□□□□ 0.18
HMGN1-211ENST00000471260 SLC44A5Q8NCS7 719 aa16.18■□□□□ 0.18
HMGN1-211ENST00000471260 OSBP2Q969R2 916 aa16.18■□□□□ 0.18
HMGN1-211ENST00000471260 PAGR1Q9BTK6 254 aa16.18■□□□□ 0.18
HMGN1-211ENST00000471260 RPAP3Q9H6T3 665 aaPredicted RBP16.18■□□□□ 0.18
HMGN1-211ENST00000471260 TMX2Q9Y320 296 aa16.18■□□□□ 0.18
HMGN1-211ENST00000471260 GSG1L2A8MUP6 293 aa16.17■□□□□ 0.18
HMGN1-211ENST00000471260 ICA1Q05084 483 aa16.17■□□□□ 0.18
HMGN1-211ENST00000471260 HDAC1Q13547 482 aaPredicted RBP16.17■□□□□ 0.18
HMGN1-211ENST00000471260 COG2Q14746 738 aa16.17■□□□□ 0.18
HMGN1-211ENST00000471260 POTEEQ6S8J3 1075 aa16.17■□□□□ 0.18
HMGN1-211ENST00000471260 GPR142Q7Z601 462 aa16.17■□□□□ 0.18
HMGN1-211ENST00000471260 PLEKHH3Q7Z736 793 aa16.17■□□□□ 0.18
HMGN1-211ENST00000471260 UBE2Q1Q7Z7E8 422 aa16.17■□□□□ 0.18
HMGN1-211ENST00000471260 PI4K2BQ8TCG2 481 aa16.17■□□□□ 0.18
HMGN1-211ENST00000471260 CRBNQ96SW2 442 aa16.17■□□□□ 0.18
HMGN1-211ENST00000471260 KANSL2Q9H9L4 492 aa16.17■□□□□ 0.18
HMGN1-211ENST00000471260 BAZ2AQ9UIF9 1905 aaKnown RBP16.17■□□□□ 0.18
HMGN1-211ENST00000471260 RPTORQ8N122 1335 aa16.17■□□□□ 0.18
HMGN1-211ENST00000471260 CNMDO75829 334 aa16.16■□□□□ 0.18
HMGN1-211ENST00000471260 AKR1B1P15121 316 aa16.16■□□□□ 0.18
HMGN1-211ENST00000471260 TSHZ3Q63HK5 1081 aa16.16■□□□□ 0.18
HMGN1-211ENST00000471260 MB21D1Q8N884 522 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms