RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 OSBPL5Q9H0X9 879 aaPredicted RBP10.96□□□□□ -0.65
XRN1-208ENST00000470537 C11orf49Q9H6J7 331 aa10.96□□□□□ -0.65
XRN1-208ENST00000470537 AS3MTQ9HBK9 375 aa10.96□□□□□ -0.65
XRN1-208ENST00000470537 NPDC1Q9NQX5 325 aaPredicted RBP10.96□□□□□ -0.65
XRN1-208ENST00000470537 LAMA3Q16787 3333 aa10.96□□□□□ -0.66
XRN1-208ENST00000470537 LDHCP07864 332 aa10.95□□□□□ -0.66
XRN1-208ENST00000470537 GGCXP38435 758 aa10.95□□□□□ -0.66
XRN1-208ENST00000470537 IL15P40933 162 aaPredicted RBP10.95□□□□□ -0.66
XRN1-208ENST00000470537 GSTO1P78417 241 aa10.95□□□□□ -0.66
XRN1-208ENST00000470537 ZNF280CQ8ND82 737 aa10.95□□□□□ -0.66
XRN1-208ENST00000470537 UBE2OQ9C0C9 1292 aaKnown RBP10.95□□□□□ -0.66
XRN1-208ENST00000470537 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.95□□□□□ -0.66
XRN1-208ENST00000470537 ABCF2Q9UG63 623 aa10.95□□□□□ -0.66
XRN1-208ENST00000470537 GAKO14976 1311 aa10.94□□□□□ -0.66
XRN1-208ENST00000470537 PDS5AQ29RF7 1337 aaKnown RBP10.94□□□□□ -0.66
XRN1-208ENST00000470537 SOX1O00570 391 aaPredicted RBP10.94□□□□□ -0.66
XRN1-208ENST00000470537 ANP32CO43423 234 aa10.94□□□□□ -0.66
XRN1-208ENST00000470537 XRCC5P13010 732 aaKnown RBP10.94□□□□□ -0.66
XRN1-208ENST00000470537 SPP2Q13103 211 aa10.94□□□□□ -0.66
XRN1-208ENST00000470537 ZFPM1Q8IX07 1006 aa10.94□□□□□ -0.66
XRN1-208ENST00000470537 SOCS4Q8WXH5 440 aa10.94□□□□□ -0.66
XRN1-208ENST00000470537 AKAP2Q9Y2D5 859 aa10.94□□□□□ -0.66
XRN1-208ENST00000470537 MYH13Q9UKX3 1938 aa10.94□□□□□ -0.66
XRN1-208ENST00000470537 CUL9Q8IWT3 2517 aa10.93□□□□□ -0.66
XRN1-208ENST00000470537 USP17L5A8MUK1 530 aa10.93□□□□□ -0.66
XRN1-208ENST00000470537 UBTFL1P0CB47 393 aaPredicted RBP10.93□□□□□ -0.66
XRN1-208ENST00000470537 IRX3P78415 501 aaPredicted RBP10.93□□□□□ -0.66
XRN1-208ENST00000470537 PICALMQ13492 652 aa10.93□□□□□ -0.66
XRN1-208ENST00000470537 PDE3AQ14432 1141 aa10.93□□□□□ -0.66
XRN1-208ENST00000470537 CCDC184Q52MB2 194 aa10.93□□□□□ -0.66
XRN1-208ENST00000470537 ERICH6Q7L0X2 663 aa10.93□□□□□ -0.66
XRN1-208ENST00000470537 ATG9AQ7Z3C6 839 aa10.93□□□□□ -0.66
XRN1-208ENST00000470537 GTF3C2Q8WUA4 911 aaPredicted RBP10.93□□□□□ -0.66
XRN1-208ENST00000470537 NUDT12Q9BQG2 462 aa10.93□□□□□ -0.66
XRN1-208ENST00000470537 NOL10Q9BSC4 688 aaKnown RBP10.93□□□□□ -0.66
XRN1-208ENST00000470537 TMOD4Q9NZQ9 345 aa10.93□□□□□ -0.66
XRN1-208ENST00000470537 HERC5Q9UII4 1024 aaKnown RBP10.93□□□□□ -0.66
XRN1-208ENST00000470537 OGDHLQ9ULD0 1010 aa10.93□□□□□ -0.66
XRN1-208ENST00000470537 ZMYND8Q9ULU4 1186 aaPredicted RBP10.93□□□□□ -0.66
XRN1-208ENST00000470537 ATRNL1Q5VV63 1379 aa10.92□□□□□ -0.66
XRN1-208ENST00000470537 GPR75-ASB3A0A0A6YYF3 556 aa10.92□□□□□ -0.66
XRN1-208ENST00000470537 DDTLA6NHG4 134 aaPredicted RBP10.92□□□□□ -0.66
XRN1-208ENST00000470537 MAPK4P31152 587 aa10.92□□□□□ -0.66
XRN1-208ENST00000470537 BTDP43251 543 aa10.92□□□□□ -0.66
XRN1-208ENST00000470537 MAGEA10P43363 369 aaPredicted RBP10.92□□□□□ -0.66
XRN1-208ENST00000470537 RFX5P48382 616 aaPredicted RBP10.92□□□□□ -0.66
XRN1-208ENST00000470537 MVPQ14764 893 aaKnown RBP10.92□□□□□ -0.66
XRN1-208ENST00000470537 CCDC102BQ68D86 513 aa10.92□□□□□ -0.66
XRN1-208ENST00000470537 GPRC5AQ8NFJ5 357 aa10.92□□□□□ -0.66
XRN1-208ENST00000470537 LBHD1Q9BQE6 289 aaPredicted RBP10.92□□□□□ -0.66
XRN1-208ENST00000470537 SIL1Q9H173 461 aa10.92□□□□□ -0.66
XRN1-208ENST00000470537 ASCC2Q9H1I8 757 aaPredicted RBP10.92□□□□□ -0.66
XRN1-208ENST00000470537 MTMR10Q9NXD2 777 aa10.92□□□□□ -0.66
XRN1-208ENST00000470537 GJD2Q9UKL4 321 aa10.92□□□□□ -0.66
XRN1-208ENST00000470537 C19orf81C9J6K1 198 aa10.91□□□□□ -0.66
XRN1-208ENST00000470537 GLRX3O76003 335 aaKnown RBP10.91□□□□□ -0.66
XRN1-208ENST00000470537 ASNSP08243 561 aa10.91□□□□□ -0.66
XRN1-208ENST00000470537 CAP2P40123 477 aa10.91□□□□□ -0.66
XRN1-208ENST00000470537 PHKA1P46020 1223 aa10.91□□□□□ -0.66
XRN1-208ENST00000470537 SH3D19Q5HYK7 790 aa10.91□□□□□ -0.66
XRN1-208ENST00000470537 TREML2Q5T2D2 321 aa10.91□□□□□ -0.66
XRN1-208ENST00000470537 FAM109BQ6ICB4 259 aaPredicted RBP10.91□□□□□ -0.66
XRN1-208ENST00000470537 SH3BP5LQ7L8J4 393 aa10.91□□□□□ -0.66
XRN1-208ENST00000470537 DIS3LQ8TF46 1054 aaKnown RBP10.91□□□□□ -0.66
XRN1-208ENST00000470537 DHX36Q9H2U1 1008 aaKnown RBP10.91□□□□□ -0.66
XRN1-208ENST00000470537 GINM1Q9NU53 330 aa10.91□□□□□ -0.66
XRN1-208ENST00000470537 PI4KBQ9UBF8 816 aa10.91□□□□□ -0.66
XRN1-208ENST00000470537 MORF4L1Q9UBU8 362 aa10.91□□□□□ -0.66
XRN1-208ENST00000470537 MROH7-TTC4A0A0A0MT08 1334 aa10.9□□□□□ -0.66
XRN1-208ENST00000470537 MYH2Q9UKX2 1941 aa10.9□□□□□ -0.66
XRN1-208ENST00000470537 BAG3O95817 575 aa10.9□□□□□ -0.66
XRN1-208ENST00000470537 ZKSCAN1P17029 563 aaPredicted RBP10.9□□□□□ -0.66
XRN1-208ENST00000470537 SYN1P17600 705 aa10.9□□□□□ -0.66
XRN1-208ENST00000470537 CYP2B6P20813 491 aa10.9□□□□□ -0.66
XRN1-208ENST00000470537 HOXA7P31268 230 aaPredicted RBP10.9□□□□□ -0.66
XRN1-208ENST00000470537 HMGCS2P54868 508 aa10.9□□□□□ -0.66
XRN1-208ENST00000470537 ALDH1L2Q3SY69 923 aa10.9□□□□□ -0.66
XRN1-208ENST00000470537 GORABQ5T7V8 394 aa10.9□□□□□ -0.66
XRN1-208ENST00000470537 MAP3K21Q5TCX8 1036 aa10.9□□□□□ -0.66
XRN1-208ENST00000470537 WDR18Q9BV38 432 aa10.9□□□□□ -0.66
XRN1-208ENST00000470537 PRR14Q9BWN1 585 aa10.9□□□□□ -0.66
XRN1-208ENST00000470537 TRIM34Q9BYJ4 488 aa10.9□□□□□ -0.66
XRN1-208ENST00000470537 CWC22Q9HCG8 908 aaKnown RBP10.9□□□□□ -0.66
XRN1-208ENST00000470537 COPRSQ9NQ92 184 aa10.9□□□□□ -0.66
XRN1-208ENST00000470537 PRKAG2Q9UGJ0 569 aa10.9□□□□□ -0.66
XRN1-208ENST00000470537 DOCK3Q8IZD9 2030 aa10.9□□□□□ -0.66
XRN1-208ENST00000470537 DOCK2Q92608 1830 aa10.9□□□□□ -0.66
XRN1-208ENST00000470537 E9PSI1 815 aa10.89□□□□□ -0.67
XRN1-208ENST00000470537 MSCO60682 206 aa10.89□□□□□ -0.67
XRN1-208ENST00000470537 IGSF3O75054 1194 aa10.89□□□□□ -0.67
XRN1-208ENST00000470537 RGS2P41220 211 aa10.89□□□□□ -0.67
XRN1-208ENST00000470537 BACE1P56817 501 aa10.89□□□□□ -0.67
XRN1-208ENST00000470537 CCNA1P78396 465 aa10.89□□□□□ -0.67
XRN1-208ENST00000470537 MECOMQ03112 1051 aa10.89□□□□□ -0.67
XRN1-208ENST00000470537 RASGRF1Q13972 1273 aa10.89□□□□□ -0.67
XRN1-208ENST00000470537 ATF7IPQ6VMQ6 1270 aa10.89□□□□□ -0.67
XRN1-208ENST00000470537 FOXP4Q8IVH2 680 aaPredicted RBP10.89□□□□□ -0.67
XRN1-208ENST00000470537 DDX4Q9NQI0 724 aaKnown RBP10.89□□□□□ -0.67
XRN1-208ENST00000470537 DOCK1Q14185 1865 aa10.89□□□□□ -0.67
XRN1-208ENST00000470537 UNC80Q8N2C7 3258 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms