RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 PKN1Q16512 942 aa23.01■■□□□ 1.27
CDHR3-207ENST00000470188 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.01■■□□□ 1.27
CDHR3-207ENST00000470188 DDAH1O94760 285 aa23.01■■□□□ 1.27
CDHR3-207ENST00000470188 PLEKHA8P1O95397 391 aa23.01■■□□□ 1.27
CDHR3-207ENST00000470188 ATP2B1P20020 1258 aa23.01■■□□□ 1.27
CDHR3-207ENST00000470188 LMOD1P29536 600 aaPredicted RBP23.01■■□□□ 1.27
CDHR3-207ENST00000470188 TROAPQ12815 778 aa23.01■■□□□ 1.27
CDHR3-207ENST00000470188 OLFM4Q6UX06 510 aa23.01■■□□□ 1.27
CDHR3-207ENST00000470188 ZNF579Q8NAF0 562 aaKnown RBP23.01■■□□□ 1.27
CDHR3-207ENST00000470188 SHISA4Q96DD7 197 aa23.01■■□□□ 1.27
CDHR3-207ENST00000470188 ATP8A2Q9NTI2 1148 aa23.01■■□□□ 1.27
CDHR3-207ENST00000470188 PCDHA5Q9Y5H7 936 aa23.01■■□□□ 1.27
CDHR3-207ENST00000470188 BTAF1O14981 1849 aa23.01■■□□□ 1.27
CDHR3-207ENST00000470188 CCDC66A2RUB6 948 aa23■■□□□ 1.27
CDHR3-207ENST00000470188 ORC4O43929 436 aa23■■□□□ 1.27
CDHR3-207ENST00000470188 MYL5Q02045 173 aa23■■□□□ 1.27
CDHR3-207ENST00000470188 ARHGEF1Q92888 912 aaKnown RBP23■■□□□ 1.27
CDHR3-207ENST00000470188 SRPRBQ9Y5M8 271 aaKnown RBP23■■□□□ 1.27
CDHR3-207ENST00000470188 V9GY48 417 aaPredicted RBP23■■□□□ 1.27
CDHR3-207ENST00000470188 MYH13Q9UKX3 1938 aa23■■□□□ 1.27
CDHR3-207ENST00000470188 NPHP1O15259 732 aa23■■□□□ 1.27
CDHR3-207ENST00000470188 TM4SF1P30408 202 aa23■■□□□ 1.27
CDHR3-207ENST00000470188 KRT2P35908 639 aa23■■□□□ 1.27
CDHR3-207ENST00000470188 DHX8Q14562 1220 aaKnown RBP23■■□□□ 1.27
CDHR3-207ENST00000470188 AMIGO3Q86WK7 504 aa23■■□□□ 1.27
CDHR3-207ENST00000470188 FOXP4Q8IVH2 680 aaPredicted RBP23■■□□□ 1.27
CDHR3-207ENST00000470188 PHF20Q9BVI0 1012 aa23■■□□□ 1.27
CDHR3-207ENST00000470188 hCG_1642624A0A1W2PR95 340 aa22.99■■□□□ 1.27
CDHR3-207ENST00000470188 FANCCQ00597 558 aa22.99■■□□□ 1.27
CDHR3-207ENST00000470188 MDM2Q00987 491 aaPredicted RBP22.99■■□□□ 1.27
CDHR3-207ENST00000470188 EVX2Q03828 476 aa22.99■■□□□ 1.27
CDHR3-207ENST00000470188 TMC6Q7Z403 805 aa22.99■■□□□ 1.27
CDHR3-207ENST00000470188 HSD3B7Q9H2F3 369 aa22.99■■□□□ 1.27
CDHR3-207ENST00000470188 ARPP21Q9UBL0 812 aaPredicted RBP22.99■■□□□ 1.27
CDHR3-207ENST00000470188 POLR2DO15514 142 aaKnown RBP22.99■■□□□ 1.27
CDHR3-207ENST00000470188 TUBB4AP04350 444 aa22.99■■□□□ 1.27
CDHR3-207ENST00000470188 TMED8Q6PL24 325 aaPredicted RBP22.99■■□□□ 1.27
CDHR3-207ENST00000470188 TXNRD3Q86VQ6 643 aa22.99■■□□□ 1.27
CDHR3-207ENST00000470188 FOXN1O15353 648 aa22.98■■□□□ 1.27
CDHR3-207ENST00000470188 TMTC3Q6ZXV5 915 aa22.98■■□□□ 1.27
CDHR3-207ENST00000470188 JAG2Q9Y219 1238 aa22.98■■□□□ 1.27
CDHR3-207ENST00000470188 MYH6P13533 1939 aa22.98■■□□□ 1.27
CDHR3-207ENST00000470188 TRIM75PA6NK02 468 aa22.97■■□□□ 1.27
CDHR3-207ENST00000470188 ATP1A3P13637 1013 aa22.97■■□□□ 1.27
CDHR3-207ENST00000470188 POSTNQ15063 836 aa22.97■■□□□ 1.27
CDHR3-207ENST00000470188 FAM182BQ5T319 152 aa22.97■■□□□ 1.27
CDHR3-207ENST00000470188 FBXO38Q6PIJ6 1188 aa22.97■■□□□ 1.27
CDHR3-207ENST00000470188 DZIP1Q86YF9 867 aaKnown RBP22.97■■□□□ 1.27
CDHR3-207ENST00000470188 CCDC150Q8NCX0 1101 aa22.97■■□□□ 1.27
CDHR3-207ENST00000470188 DLEC1Q9Y238 1755 aa22.97■■□□□ 1.27
CDHR3-207ENST00000470188 FAM205CA6NFA0 338 aa22.97■■□□□ 1.27
CDHR3-207ENST00000470188 NMT2O60551 498 aa22.97■■□□□ 1.27
CDHR3-207ENST00000470188 CYP2D6P10635 497 aa22.97■■□□□ 1.27
CDHR3-207ENST00000470188 SBK1Q52WX2 424 aa22.97■■□□□ 1.27
CDHR3-207ENST00000470188 FAM47AQ5JRC9 791 aa22.97■■□□□ 1.27
CDHR3-207ENST00000470188 SPTY2D1Q68D10 685 aaPredicted RBP22.97■■□□□ 1.27
CDHR3-207ENST00000470188 CTCFLQ8NI51 663 aaPredicted RBP22.97■■□□□ 1.27
CDHR3-207ENST00000470188 SERTAD1Q9UHV2 236 aa22.97■■□□□ 1.27
CDHR3-207ENST00000470188 NHSQ6T4R5 1651 aa22.97■■□□□ 1.27
CDHR3-207ENST00000470188 MAST2Q6P0Q8 1798 aa22.97■■□□□ 1.27
CDHR3-207ENST00000470188 AFF2P51816 1311 aa22.96■■□□□ 1.27
CDHR3-207ENST00000470188 ELF2Q15723 593 aa22.96■■□□□ 1.27
CDHR3-207ENST00000470188 CSRNP2Q9H175 543 aa22.96■■□□□ 1.27
CDHR3-207ENST00000470188 BRMS1Q9HCU9 246 aa22.96■■□□□ 1.27
CDHR3-207ENST00000470188 IRS2Q9Y4H2 1338 aa22.96■■□□□ 1.27
CDHR3-207ENST00000470188 KCNJ6P48051 423 aa22.96■■□□□ 1.27
CDHR3-207ENST00000470188 PDE4BQ07343 736 aa22.96■■□□□ 1.27
CDHR3-207ENST00000470188 NOL10Q9BSC4 688 aaKnown RBP22.96■■□□□ 1.27
CDHR3-207ENST00000470188 L2HGDHQ9H9P8 463 aa22.96■■□□□ 1.27
CDHR3-207ENST00000470188 RFC4P35249 363 aa22.95■■□□□ 1.26
CDHR3-207ENST00000470188 EARS2Q5JPH6 523 aaKnown RBP22.95■■□□□ 1.26
CDHR3-207ENST00000470188 TRMT1Q9NXH9 659 aaKnown RBP22.95■■□□□ 1.26
CDHR3-207ENST00000470188 MAN1B1Q9UKM7 699 aa22.95■■□□□ 1.26
CDHR3-207ENST00000470188 LAMB1P07942 1786 aa22.95■■□□□ 1.26
CDHR3-207ENST00000470188 CNTNAP5Q8WYK1 1306 aa22.95■■□□□ 1.26
CDHR3-207ENST00000470188 ZBTB22O15209 634 aa22.94■■□□□ 1.26
CDHR3-207ENST00000470188 BMP6P22004 513 aa22.94■■□□□ 1.26
CDHR3-207ENST00000470188 ANKIB1Q9P2G1 1089 aa22.94■■□□□ 1.26
CDHR3-207ENST00000470188 TSPY2A6NKD2 308 aa22.94■■□□□ 1.26
CDHR3-207ENST00000470188 CBFA2T2O43439 604 aa22.94■■□□□ 1.26
CDHR3-207ENST00000470188 MYO1BO43795 1136 aa22.94■■□□□ 1.26
CDHR3-207ENST00000470188 SERPINC1P01008 464 aa22.94■■□□□ 1.26
CDHR3-207ENST00000470188 SFPQP23246 707 aaKnown RBP eCLIP22.94■■□□□ 1.266e-7■■□□□ 12.2
CDHR3-207ENST00000470188 KANK3Q6NY19 840 aa22.94■■□□□ 1.26
CDHR3-207ENST00000470188 ARMCX5Q6P1M9 558 aa22.94■■□□□ 1.26
CDHR3-207ENST00000470188 SRBD1Q8N5C6 995 aaKnown RBP22.94■■□□□ 1.26
CDHR3-207ENST00000470188 PDILTQ8N807 584 aa22.94■■□□□ 1.26
CDHR3-207ENST00000470188 SMARCE1Q969G3 411 aa22.94■■□□□ 1.26
CDHR3-207ENST00000470188 MCM9Q9NXL9 1143 aa22.94■■□□□ 1.26
CDHR3-207ENST00000470188 TNRC6CQ9HCJ0 1690 aaKnown RBP22.94■■□□□ 1.26
CDHR3-207ENST00000470188 PSDA5PKW4 1024 aaPredicted RBP22.93■■□□□ 1.26
CDHR3-207ENST00000470188 PRR29P0C7W0 189 aa22.93■■□□□ 1.26
CDHR3-207ENST00000470188 UBASH3AP57075 661 aa22.93■■□□□ 1.26
CDHR3-207ENST00000470188 NT5DC1Q5TFE4 455 aa22.93■■□□□ 1.26
CDHR3-207ENST00000470188 ACTN4O43707 911 aaKnown RBP22.93■■□□□ 1.26
CDHR3-207ENST00000470188 BMS1Q14692 1282 aaKnown RBP22.93■■□□□ 1.26
CDHR3-207ENST00000470188 USP49Q70CQ1 688 aa22.93■■□□□ 1.26
CDHR3-207ENST00000470188 FANCLQ9NW38 375 aa22.93■■□□□ 1.26
CDHR3-207ENST00000470188 BMP15O95972 392 aa22.92■■□□□ 1.26
CDHR3-207ENST00000470188 GRAPQ13588 217 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms