RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 ZKSCAN5Q9Y2L8 839 aa7.96□□□□□ -1.13
GAPVD1-215ENST00000470056 ARAP2Q8WZ64 1704 aa7.96□□□□□ -1.13
GAPVD1-215ENST00000470056 TYRO3Q06418 890 aa7.96□□□□□ -1.13
GAPVD1-215ENST00000470056 TBC1D16Q8TBP0 767 aa7.96□□□□□ -1.13
GAPVD1-215ENST00000470056 CUTAO60888 179 aa7.96□□□□□ -1.14
GAPVD1-215ENST00000470056 PPP6R2O75170 966 aa7.96□□□□□ -1.14
GAPVD1-215ENST00000470056 FAM173BQ6P4H8 233 aa7.96□□□□□ -1.14
GAPVD1-215ENST00000470056 DIS3L2Q8IYB7 885 aaKnown RBP7.96□□□□□ -1.14
GAPVD1-215ENST00000470056 EHBP1Q8NDI1 1231 aa7.96□□□□□ -1.14
GAPVD1-215ENST00000470056 MAP3K14Q99558 947 aa7.96□□□□□ -1.14
GAPVD1-215ENST00000470056 CAMK4Q16566 473 aa7.96□□□□□ -1.14
GAPVD1-215ENST00000470056 ZKSCAN3Q9BRR0 538 aa7.96□□□□□ -1.14
GAPVD1-215ENST00000470056 SEC63Q9UGP8 760 aaKnown RBP7.96□□□□□ -1.14
GAPVD1-215ENST00000470056 SOGA3Q5TF21 947 aa7.96□□□□□ -1.14
GAPVD1-215ENST00000470056 GALNT17Q6IS24 598 aa7.96□□□□□ -1.14
GAPVD1-215ENST00000470056 PANK2Q9BZ23 570 aa7.96□□□□□ -1.14
GAPVD1-215ENST00000470056 FDPSP14324 419 aaKnown RBP7.96□□□□□ -1.14
GAPVD1-215ENST00000470056 RXRAP19793 462 aa7.96□□□□□ -1.14
GAPVD1-215ENST00000470056 SLC39A14Q15043 492 aa7.96□□□□□ -1.14
GAPVD1-215ENST00000470056 GPHNQ9NQX3 736 aaPredicted RBP7.96□□□□□ -1.14
GAPVD1-215ENST00000470056 CRACR2BQ8N4Y2 399 aaPredicted RBP7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 KRI1Q8N9T8 703 aaKnown RBP7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 LINC00301Q8NCQ3 95 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 CCDC150Q8NCX0 1101 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 NBPF3Q9H094 633 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 TMOD2Q9NZR1 351 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 A0A0G2JLW4 131 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 MMP10P09238 476 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 FGRP09769 529 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 C2CD5Q86YS7 1000 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 CHAMP1Q96JM3 812 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 PRDM1O75626 825 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 BAG6P46379 1132 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 PODNQ7Z5L7 613 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 PHKBQ93100 1093 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 SWAP70Q9UH65 585 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 KLRG2A4D1S0 409 aaPredicted RBP7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 TRIM75PA6NK02 468 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 hCG_1984214I3L0E3 225 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 MMP1P03956 469 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 CMA1P23946 247 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 STYK1Q6J9G0 422 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 ZNF713Q8N859 430 aaPredicted RBP7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 PCMTD1Q96MG8 357 aaPredicted RBP7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 NLRP5P59047 1200 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 MYL10Q9BUA6 226 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 TFAP4Q01664 338 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 SMIM5Q71RC9 77 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 TGFBRAP1Q8WUH2 860 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 FAM205AQ6ZU69 1335 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 ADGRA1Q86SQ6 560 aa7.95□□□□□ -1.14
GAPVD1-215ENST00000470056 TRAPPC10P48553 1259 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 TEKT1Q969V4 418 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 USP25Q9UHP3 1055 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 KLRK1P26718 216 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 SYKP43405 635 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 CKAP2LQ8IYA6 745 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 FAM163AQ96GL9 167 aaPredicted RBP7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 GPR75-ASB3A0A0A6YYF3 556 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 ZNF165P49910 485 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 DDR1Q08345 913 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 C12orf60Q5U649 245 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 ENAHQ8N8S7 591 aaPredicted RBP7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 SH3GLB2Q9NR46 395 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 JAG2Q9Y219 1238 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 U2AF2P26368 475 aaKnown RBP eCLIP7.94□□□□□ -1.141e-6■■■□□ 15.4
GAPVD1-215ENST00000470056 TCP11L1Q9NUJ3 509 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 PCDHA7Q9UN72 937 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 CCDC194A0A1B0GVG4 234 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 GTF2IP78347 998 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 OTUD7BQ6GQQ9 843 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 TMTC3Q6ZXV5 915 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 MAPKAPK5Q8IW41 473 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 STX8Q9UNK0 236 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 CDC27P30260 824 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 ARHGAP29Q52LW3 1261 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 MAGEC2Q9UBF1 373 aaPredicted RBP7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 SERPINC1P01008 464 aa7.94□□□□□ -1.14
GAPVD1-215ENST00000470056 FERMT2Q96AC1 680 aa7.93□□□□□ -1.14
GAPVD1-215ENST00000470056 DDX60Q8IY21 1712 aaKnown RBP7.93□□□□□ -1.14
GAPVD1-215ENST00000470056 RIMBP2O15034 1052 aa7.93□□□□□ -1.14
GAPVD1-215ENST00000470056 PPFIA3O75145 1194 aa7.93□□□□□ -1.14
GAPVD1-215ENST00000470056 SRGNP10124 158 aa7.93□□□□□ -1.14
GAPVD1-215ENST00000470056 LIG1P18858 919 aa7.93□□□□□ -1.14
GAPVD1-215ENST00000470056 PARP1P09874 1014 aaKnown RBP7.93□□□□□ -1.14
GAPVD1-215ENST00000470056 CCDC82Q8N4S0 544 aa7.93□□□□□ -1.14
GAPVD1-215ENST00000470056 V9GY48 417 aaPredicted RBP7.93□□□□□ -1.14
GAPVD1-215ENST00000470056 COL24A1Q17RW2 1714 aa7.93□□□□□ -1.14
GAPVD1-215ENST00000470056 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.93□□□□□ -1.14
GAPVD1-215ENST00000470056 AKT1S1Q96B36 256 aa7.93□□□□□ -1.14
GAPVD1-215ENST00000470056 CLSTN1O94985 981 aa7.93□□□□□ -1.14
GAPVD1-215ENST00000470056 SCG2P13521 617 aa7.93□□□□□ -1.14
GAPVD1-215ENST00000470056 SEC23AQ15436 765 aa7.93□□□□□ -1.14
GAPVD1-215ENST00000470056 ANO6Q4KMQ2 910 aa7.93□□□□□ -1.14
GAPVD1-215ENST00000470056 PNMA1Q8ND90 353 aa7.93□□□□□ -1.14
GAPVD1-215ENST00000470056 DYDC1Q8WWB3 177 aa7.93□□□□□ -1.14
GAPVD1-215ENST00000470056 HDAC9Q9UKV0 1011 aa7.93□□□□□ -1.14
GAPVD1-215ENST00000470056 MARCH6O60337 910 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms