RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 MICAL1Q8TDZ2 1067 aa6.31□□□□□ -1.4
VPS8-220ENST00000469713 TP53INP1Q96A56 240 aa6.31□□□□□ -1.4
VPS8-220ENST00000469713 CCDC74BQ96LY2 380 aa6.31□□□□□ -1.4
VPS8-220ENST00000469713 PSMG3-AS1Q96PY0 264 aa6.31□□□□□ -1.4
VPS8-220ENST00000469713 MIPEPQ99797 713 aa6.31□□□□□ -1.4
VPS8-220ENST00000469713 KRTAP4-8Q9BYQ9 185 aa6.31□□□□□ -1.4
VPS8-220ENST00000469713 ST7Q9NRC1 585 aa6.31□□□□□ -1.4
VPS8-220ENST00000469713 LOC105371045A0A1W2PR82 267 aa6.3□□□□□ -1.4
VPS8-220ENST00000469713 BMS1Q14692 1282 aaKnown RBP6.3□□□□□ -1.4
VPS8-220ENST00000469713 PAOXQ6QHF9 649 aa6.3□□□□□ -1.4
VPS8-220ENST00000469713 MFSD2AQ8NA29 543 aa6.3□□□□□ -1.4
VPS8-220ENST00000469713 PPP1R13LQ8WUF5 828 aa6.3□□□□□ -1.4
VPS8-220ENST00000469713 PIF1Q9H611 641 aa6.3□□□□□ -1.4
VPS8-220ENST00000469713 ZSWIM4Q9H7M6 989 aa6.3□□□□□ -1.4
VPS8-220ENST00000469713 C1GALT1Q9NS00 363 aa6.3□□□□□ -1.4
VPS8-220ENST00000469713 HMX2A2RU54 273 aa6.29□□□□□ -1.4
VPS8-220ENST00000469713 B2RBV5 119 aa6.29□□□□□ -1.4
VPS8-220ENST00000469713 U2SURPO15042 1029 aaKnown RBP6.29□□□□□ -1.4
VPS8-220ENST00000469713 SLITRK5O94991 958 aa6.29□□□□□ -1.4
VPS8-220ENST00000469713 GBP1P32455 592 aa6.29□□□□□ -1.4
VPS8-220ENST00000469713 FXNQ16595 210 aa6.29□□□□□ -1.4
VPS8-220ENST00000469713 DDR2Q16832 855 aa6.29□□□□□ -1.4
VPS8-220ENST00000469713 LETMD1Q6P1Q0 360 aa6.29□□□□□ -1.4
VPS8-220ENST00000469713 CLEC10AQ8IUN9 316 aa6.29□□□□□ -1.4
VPS8-220ENST00000469713 TMEM192Q8IY95 271 aa6.29□□□□□ -1.4
VPS8-220ENST00000469713 TOP6BLQ8N6T0 577 aa6.29□□□□□ -1.4
VPS8-220ENST00000469713 DNAJB8Q8NHS0 232 aa6.29□□□□□ -1.4
VPS8-220ENST00000469713 RIN3Q8TB24 985 aa6.29□□□□□ -1.4
VPS8-220ENST00000469713 SLC6A18Q96N87 628 aa6.29□□□□□ -1.4
VPS8-220ENST00000469713 FAM83CQ9BQN1 747 aa6.29□□□□□ -1.4
VPS8-220ENST00000469713 C7orf69Q9H7B7 122 aa6.29□□□□□ -1.4
VPS8-220ENST00000469713 PRDM10Q9NQV6 1147 aa6.29□□□□□ -1.4
VPS8-220ENST00000469713 TPSG1Q9NRR2 321 aa6.29□□□□□ -1.4
VPS8-220ENST00000469713 SIRPGQ9P1W8 387 aa6.29□□□□□ -1.4
VPS8-220ENST00000469713 PCDHB10Q9UN67 800 aa6.29□□□□□ -1.4
VPS8-220ENST00000469713 SLC12A7Q9Y666 1083 aa6.29□□□□□ -1.4
VPS8-220ENST00000469713 CCDC85CA6NKD9 419 aa6.28□□□□□ -1.4
VPS8-220ENST00000469713 RBAK-RBAKDNI3L0D1 243 aa6.28□□□□□ -1.4
VPS8-220ENST00000469713 K7ELQ4 463 aaPredicted RBP6.28□□□□□ -1.4
VPS8-220ENST00000469713 LEFTY1O75610 366 aa6.28□□□□□ -1.4
VPS8-220ENST00000469713 CCNFP41002 786 aa6.28□□□□□ -1.4
VPS8-220ENST00000469713 C6orf15Q6UXA7 325 aaPredicted RBP6.28□□□□□ -1.4
VPS8-220ENST00000469713 CDH24Q86UP0 819 aa6.28□□□□□ -1.4
VPS8-220ENST00000469713 CEP131Q9UPN4 1083 aa6.28□□□□□ -1.4
VPS8-220ENST00000469713 MAPK8IP1Q9UQF2 711 aa6.28□□□□□ -1.4
VPS8-220ENST00000469713 RAXQ9Y2V3 346 aa6.28□□□□□ -1.4
VPS8-220ENST00000469713 DDAH1O94760 285 aa6.27□□□□□ -1.41
VPS8-220ENST00000469713 GJB6O95452 261 aa6.27□□□□□ -1.41
VPS8-220ENST00000469713 ADMP35318 185 aa6.27□□□□□ -1.41
VPS8-220ENST00000469713 TDRD10Q5VZ19 366 aaKnown RBP6.27□□□□□ -1.41
VPS8-220ENST00000469713 VHLLQ6RSH7 139 aa6.27□□□□□ -1.41
VPS8-220ENST00000469713 PPFIBP1Q86W92 1011 aa6.27□□□□□ -1.41
VPS8-220ENST00000469713 FAM178BQ8IXR5 827 aa6.27□□□□□ -1.41
VPS8-220ENST00000469713 SHISA5Q8N114 240 aa6.27□□□□□ -1.41
VPS8-220ENST00000469713 GATA6Q92908 595 aa6.27□□□□□ -1.41
VPS8-220ENST00000469713 ZNF512BQ96KM6 892 aaPredicted RBP6.27□□□□□ -1.41
VPS8-220ENST00000469713 DUSP23Q9BVJ7 150 aa6.27□□□□□ -1.41
VPS8-220ENST00000469713 PHAXQ9H814 394 aaKnown RBP6.27□□□□□ -1.41
VPS8-220ENST00000469713 FAM86C1Q9NVL1 165 aa6.27□□□□□ -1.41
VPS8-220ENST00000469713 STOML1Q9UBI4 398 aa6.27□□□□□ -1.41
VPS8-220ENST00000469713 SUCOQ9UBS9 1254 aaKnown RBP6.27□□□□□ -1.41
VPS8-220ENST00000469713 ZNF214Q9UL59 606 aaPredicted RBP6.27□□□□□ -1.41
VPS8-220ENST00000469713 CDK11AQ9UQ88 783 aaPredicted RBP6.27□□□□□ -1.41
VPS8-220ENST00000469713 FAM221BA6H8Z2 402 aa6.26□□□□□ -1.41
VPS8-220ENST00000469713 CLEC3AO75596 197 aa6.26□□□□□ -1.41
VPS8-220ENST00000469713 EOMESO95936 686 aa6.26□□□□□ -1.41
VPS8-220ENST00000469713 FAM87AP0C7U9 286 aa6.26□□□□□ -1.41
VPS8-220ENST00000469713 PMS1P54277 932 aaKnown RBP6.26□□□□□ -1.41
VPS8-220ENST00000469713 RASA3Q14644 834 aa6.26□□□□□ -1.41
VPS8-220ENST00000469713 GNPTABQ3T906 1256 aa6.26□□□□□ -1.41
VPS8-220ENST00000469713 MRM1Q6IN84 353 aaKnown RBP6.26□□□□□ -1.41
VPS8-220ENST00000469713 PRR23CQ6ZRP0 262 aa6.26□□□□□ -1.41
VPS8-220ENST00000469713 KLHL6Q8WZ60 621 aa6.26□□□□□ -1.41
VPS8-220ENST00000469713 MKL1Q969V6 931 aa6.26□□□□□ -1.41
VPS8-220ENST00000469713 TBC1D32Q96NH3 1257 aa6.26□□□□□ -1.41
VPS8-220ENST00000469713 DEPDC7Q96QD5 511 aa6.26□□□□□ -1.41
VPS8-220ENST00000469713 SRPK1Q96SB4 655 aaKnown RBP6.26□□□□□ -1.41
VPS8-220ENST00000469713 SNTG2Q9NY99 539 aa6.26□□□□□ -1.41
VPS8-220ENST00000469713 MSRB2Q9Y3D2 182 aa6.26□□□□□ -1.41
VPS8-220ENST00000469713 COL17A1Q9UMD9 1497 aaPredicted RBP6.26□□□□□ -1.41
VPS8-220ENST00000469713 CNTNAP4Q9C0A0 1308 aa6.25□□□□□ -1.41
VPS8-220ENST00000469713 C9IYK1 514 aa6.25□□□□□ -1.41
VPS8-220ENST00000469713 CHMP4BP1P59074 171 aa6.25□□□□□ -1.41
VPS8-220ENST00000469713 SLC7A5Q01650 507 aa6.25□□□□□ -1.41
VPS8-220ENST00000469713 DOC2BQ14184 412 aa6.25□□□□□ -1.41
VPS8-220ENST00000469713 NFE2L2Q16236 605 aa6.25□□□□□ -1.41
VPS8-220ENST00000469713 KIAA1211LQ6NV74 962 aa6.25□□□□□ -1.41
VPS8-220ENST00000469713 ZAR1Q86SH2 424 aa6.25□□□□□ -1.41
VPS8-220ENST00000469713 DHRS1Q96LJ7 313 aa6.25□□□□□ -1.41
VPS8-220ENST00000469713 MFSD14AQ96MC6 490 aa6.25□□□□□ -1.41
VPS8-220ENST00000469713 KREMEN1Q96MU8 473 aa6.25□□□□□ -1.41
VPS8-220ENST00000469713 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.25□□□□□ -1.41
VPS8-220ENST00000469713 FAM170BA6NMN3 283 aa6.24□□□□□ -1.41
VPS8-220ENST00000469713 TP53P04637 393 aaPredicted RBP6.24□□□□□ -1.41
VPS8-220ENST00000469713 ETV3P41162 512 aa6.24□□□□□ -1.41
VPS8-220ENST00000469713 NCAPHQ15003 741 aa6.24□□□□□ -1.41
VPS8-220ENST00000469713 GIMAP6Q6P9H5 292 aa6.24□□□□□ -1.41
VPS8-220ENST00000469713 FBXL6Q8N531 539 aa6.24□□□□□ -1.41
VPS8-220ENST00000469713 MRFAP1L1Q96HT8 127 aa6.24□□□□□ -1.41
VPS8-220ENST00000469713 CCDC113Q9H0I3 377 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms