RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 FAM173BQ6P4H8 233 aa10.81□□□□□ -0.68
SMC1A-205ENST00000469129 NBPF11Q86T75 865 aa10.81□□□□□ -0.68
SMC1A-205ENST00000469129 FAM177A1Q8N128 213 aaPredicted RBP10.81□□□□□ -0.68
SMC1A-205ENST00000469129 JMYQ8N9B5 988 aa10.81□□□□□ -0.68
SMC1A-205ENST00000469129 PNMA1Q8ND90 353 aa10.81□□□□□ -0.68
SMC1A-205ENST00000469129 NEDD1Q8NHV4 660 aa10.81□□□□□ -0.68
SMC1A-205ENST00000469129 DYNLL2Q96FJ2 89 aa10.81□□□□□ -0.68
SMC1A-205ENST00000469129 OSBPL5Q9H0X9 879 aaPredicted RBP10.81□□□□□ -0.68
SMC1A-205ENST00000469129 EHD4Q9H223 541 aa10.81□□□□□ -0.68
SMC1A-205ENST00000469129 DHX36Q9H2U1 1008 aaKnown RBP10.81□□□□□ -0.68
SMC1A-205ENST00000469129 BRMS1Q9HCU9 246 aa10.81□□□□□ -0.68
SMC1A-205ENST00000469129 USP40Q9NVE5 1235 aa10.81□□□□□ -0.68
SMC1A-205ENST00000469129 RTEL1Q9NZ71 1219 aa10.81□□□□□ -0.68
SMC1A-205ENST00000469129 RCOR1Q9UKL0 485 aa10.81□□□□□ -0.68
SMC1A-205ENST00000469129 GOLGB1Q14789 3259 aaKnown RBP10.8□□□□□ -0.68
SMC1A-205ENST00000469129 SYCE3A1L190 88 aa10.8□□□□□ -0.68
SMC1A-205ENST00000469129 PPFIA3O75145 1194 aa10.8□□□□□ -0.68
SMC1A-205ENST00000469129 WDHD1O75717 1129 aaPredicted RBP10.8□□□□□ -0.68
SMC1A-205ENST00000469129 DPEP1P16444 411 aa10.8□□□□□ -0.68
SMC1A-205ENST00000469129 U2AF2P26368 475 aaKnown RBP eCLIP10.8□□□□□ -0.68
SMC1A-205ENST00000469129 NASPP49321 788 aaPredicted RBP10.8□□□□□ -0.68
SMC1A-205ENST00000469129 SCNN1DP51172 638 aa10.8□□□□□ -0.68
SMC1A-205ENST00000469129 PLCD1P51178 756 aa10.8□□□□□ -0.68
SMC1A-205ENST00000469129 GRM4Q14833 912 aa10.8□□□□□ -0.68
SMC1A-205ENST00000469129 SLC4A8Q2Y0W8 1093 aa10.8□□□□□ -0.68
SMC1A-205ENST00000469129 CDC42EP5Q6NZY7 148 aa10.8□□□□□ -0.68
SMC1A-205ENST00000469129 CCDC73Q6ZRK6 1079 aa10.8□□□□□ -0.68
SMC1A-205ENST00000469129 ANP32BQ92688 251 aaKnown RBP10.8□□□□□ -0.68
SMC1A-205ENST00000469129 USP28Q96RU2 1077 aa10.8□□□□□ -0.68
SMC1A-205ENST00000469129 LZTS2Q9BRK4 669 aa10.8□□□□□ -0.68
SMC1A-205ENST00000469129 FOXP1Q9H334 677 aaPredicted RBP10.8□□□□□ -0.68
SMC1A-205ENST00000469129 TSPY26PQ9H489 355 aa10.8□□□□□ -0.68
SMC1A-205ENST00000469129 PIM2Q9P1W9 311 aa10.8□□□□□ -0.68
SMC1A-205ENST00000469129 TFIP11Q9UBB9 837 aaKnown RBP10.8□□□□□ -0.68
SMC1A-205ENST00000469129 HDAC9Q9UKV0 1011 aa10.8□□□□□ -0.68
SMC1A-205ENST00000469129 NMT2O60551 498 aa10.79□□□□□ -0.68
SMC1A-205ENST00000469129 TOP1P11387 765 aaKnown RBP10.79□□□□□ -0.68
SMC1A-205ENST00000469129 RBM5P52756 815 aaKnown RBP eCLIP10.79□□□□□ -0.68
SMC1A-205ENST00000469129 EVX2Q03828 476 aa10.79□□□□□ -0.68
SMC1A-205ENST00000469129 SF3A1Q15459 793 aaKnown RBP10.79□□□□□ -0.68
SMC1A-205ENST00000469129 OTUD7BQ6GQQ9 843 aa10.79□□□□□ -0.68
SMC1A-205ENST00000469129 RCSD1Q6JBY9 416 aa10.79□□□□□ -0.68
SMC1A-205ENST00000469129 KIAA0825Q8IV33 1275 aa10.79□□□□□ -0.68
SMC1A-205ENST00000469129 LARGE2Q8N3Y3 721 aa10.79□□□□□ -0.68
SMC1A-205ENST00000469129 IDI2Q9BXS1 227 aa10.79□□□□□ -0.68
SMC1A-205ENST00000469129 NUP62CLQ9H1M0 184 aa10.79□□□□□ -0.68
SMC1A-205ENST00000469129 TMOD2Q9NZR1 351 aa10.79□□□□□ -0.68
SMC1A-205ENST00000469129 SERPINB13Q9UIV8 391 aa10.79□□□□□ -0.68
SMC1A-205ENST00000469129 A0A1W2PQ27 194 aa10.78□□□□□ -0.68
SMC1A-205ENST00000469129 A0A1W2PQ64 194 aa10.78□□□□□ -0.68
SMC1A-205ENST00000469129 A0A1W2PQD8 194 aa10.78□□□□□ -0.68
SMC1A-205ENST00000469129 KIF28PB7ZC32 967 aa10.78□□□□□ -0.68
SMC1A-205ENST00000469129 PLEKHA8P1O95397 391 aa10.78□□□□□ -0.68
SMC1A-205ENST00000469129 YBX3P16989 372 aaKnown RBP eCLIP10.78□□□□□ -0.681e-7■□□□□ 9.1
SMC1A-205ENST00000469129 ME1P48163 572 aa10.78□□□□□ -0.68
SMC1A-205ENST00000469129 GABPAQ06546 454 aa10.78□□□□□ -0.68
SMC1A-205ENST00000469129 RILPL1Q5EBL4 403 aa10.78□□□□□ -0.68
SMC1A-205ENST00000469129 ANO1Q5XXA6 986 aa10.78□□□□□ -0.68
SMC1A-205ENST00000469129 APOBEC3HQ6NTF7 200 aaKnown RBP10.78□□□□□ -0.68
SMC1A-205ENST00000469129 NOSTRINQ8IVI9 506 aa10.78□□□□□ -0.68
SMC1A-205ENST00000469129 NIM1KQ8IY84 436 aa10.78□□□□□ -0.68
SMC1A-205ENST00000469129 DIS3L2Q8IYB7 885 aaKnown RBP10.78□□□□□ -0.68
SMC1A-205ENST00000469129 SLC44A5Q8NCS7 719 aa10.78□□□□□ -0.68
SMC1A-205ENST00000469129 CCDC148Q8NFR7 591 aa10.78□□□□□ -0.68
SMC1A-205ENST00000469129 AIFM3Q96NN9 605 aa10.78□□□□□ -0.68
SMC1A-205ENST00000469129 MXD3Q9BW11 206 aa10.78□□□□□ -0.68
SMC1A-205ENST00000469129 TRIM34Q9BYJ4 488 aa10.78□□□□□ -0.68
SMC1A-205ENST00000469129 IL17RBQ9NRM6 502 aa10.78□□□□□ -0.68
SMC1A-205ENST00000469129 STX8Q9UNK0 236 aa10.78□□□□□ -0.68
SMC1A-205ENST00000469129 CEP131Q9UPN4 1083 aa10.78□□□□□ -0.68
SMC1A-205ENST00000469129 COL4A5P29400 1685 aa10.78□□□□□ -0.68
SMC1A-205ENST00000469129 ATRNL1Q5VV63 1379 aa10.77□□□□□ -0.68
SMC1A-205ENST00000469129 SPTLC2O15270 562 aa10.77□□□□□ -0.69
SMC1A-205ENST00000469129 CTAGE5O15320 804 aa10.77□□□□□ -0.69
SMC1A-205ENST00000469129 ENTPD3O75355 529 aa10.77□□□□□ -0.69
SMC1A-205ENST00000469129 SCG2P13521 617 aa10.77□□□□□ -0.69
SMC1A-205ENST00000469129 CALML3P27482 149 aa10.77□□□□□ -0.69
SMC1A-205ENST00000469129 KRT2P35908 639 aa10.77□□□□□ -0.69
SMC1A-205ENST00000469129 MMP14P50281 582 aa10.77□□□□□ -0.69
SMC1A-205ENST00000469129 CEBPZQ03701 1054 aaKnown RBP10.77□□□□□ -0.69
SMC1A-205ENST00000469129 FUT2Q10981 343 aa10.77□□□□□ -0.69
SMC1A-205ENST00000469129 MAP3K11Q16584 847 aa10.77□□□□□ -0.69
SMC1A-205ENST00000469129 DALRD3Q5D0E6 543 aaKnown RBP10.77□□□□□ -0.69
SMC1A-205ENST00000469129 RSBN1LQ6PCB5 846 aaPredicted RBP10.77□□□□□ -0.69
SMC1A-205ENST00000469129 LINC00301Q8NCQ3 95 aa10.77□□□□□ -0.69
SMC1A-205ENST00000469129 MRPS27Q92552 414 aaKnown RBP10.77□□□□□ -0.69
SMC1A-205ENST00000469129 CCDC17Q96LX7 622 aa10.77□□□□□ -0.69
SMC1A-205ENST00000469129 TMEM47Q9BQJ4 181 aa10.77□□□□□ -0.69
SMC1A-205ENST00000469129 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.77□□□□□ -0.69
SMC1A-205ENST00000469129 TNMDQ9H2S6 317 aa10.77□□□□□ -0.69
SMC1A-205ENST00000469129 CLSTN2Q9H4D0 955 aa10.77□□□□□ -0.69
SMC1A-205ENST00000469129 DDX4Q9NQI0 724 aaKnown RBP10.77□□□□□ -0.69
SMC1A-205ENST00000469129 SH3GLB2Q9NR46 395 aa10.77□□□□□ -0.69
SMC1A-205ENST00000469129 NOL7Q9UMY1 257 aaKnown RBP10.77□□□□□ -0.69
SMC1A-205ENST00000469129 BAZ2BQ9UIF8 2168 aaKnown RBP10.76□□□□□ -0.69
SMC1A-205ENST00000469129 YDJCA8MPS7 323 aa10.76□□□□□ -0.69
SMC1A-205ENST00000469129 hCG_1984214I3L0E3 225 aa10.76□□□□□ -0.69
SMC1A-205ENST00000469129 KINO60870 393 aaKnown RBP10.76□□□□□ -0.69
SMC1A-205ENST00000469129 PPP6R2O75170 966 aa10.76□□□□□ -0.69
SMC1A-205ENST00000469129 BMP15O95972 392 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms