RNA–Protein interactions for RNA: ENST00000468996.2

TGFBR3-205, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-205ENST00000468996 ZSCAN25Q6NSZ9 544 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 AMOTL1Q8IY63 956 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 SLC44A5Q8NCS7 719 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 U2AF1L4Q8WU68 220 aaKnown RBP12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 GPATCH3Q96I76 525 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 DEFB118Q96PH6 123 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 KIAA1683Q9H0B3 1180 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 CWC22Q9HCG8 908 aaKnown RBP12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 ATP8A2Q9NTI2 1148 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 GJD2Q9UKL4 321 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 SLC4A4Q9Y6R1 1079 aa12.82□□□□□ -0.36
TGFBR3-205ENST00000468996 USP17L12C9JPN9 530 aa12.81□□□□□ -0.36
TGFBR3-205ENST00000468996 USP17L21D6R901 530 aa12.81□□□□□ -0.36
TGFBR3-205ENST00000468996 SGPL1O95470 568 aa12.81□□□□□ -0.36
TGFBR3-205ENST00000468996 GUCY1A2P33402 732 aa12.81□□□□□ -0.36
TGFBR3-205ENST00000468996 GABPAQ06546 454 aa12.81□□□□□ -0.36
TGFBR3-205ENST00000468996 UBE3CQ15386 1083 aa12.81□□□□□ -0.36
TGFBR3-205ENST00000468996 SHISA4Q96DD7 197 aa12.81□□□□□ -0.36
TGFBR3-205ENST00000468996 PUS7LQ9H0K6 701 aaKnown RBP12.81□□□□□ -0.36
TGFBR3-205ENST00000468996 PCDHB15Q9Y5E8 787 aa12.81□□□□□ -0.36
TGFBR3-205ENST00000468996 PTPRFP10586 1907 aa12.81□□□□□ -0.36
TGFBR3-205ENST00000468996 SIPA1L1O43166 1804 aa12.81□□□□□ -0.36
TGFBR3-205ENST00000468996 SMIM22K7EJ46 135 aa12.8□□□□□ -0.36
TGFBR3-205ENST00000468996 VCAM1P19320 739 aa12.8□□□□□ -0.36
TGFBR3-205ENST00000468996 ERVK-9P63128 1117 aa12.8□□□□□ -0.36
TGFBR3-205ENST00000468996 ERVK-24P63145 666 aa12.8□□□□□ -0.36
TGFBR3-205ENST00000468996 WDR78Q5VTH9 848 aa12.8□□□□□ -0.36
TGFBR3-205ENST00000468996 CATSPERGQ6ZRH7 1159 aa12.8□□□□□ -0.36
TGFBR3-205ENST00000468996 C12orf42Q96LP6 360 aa12.8□□□□□ -0.36
TGFBR3-205ENST00000468996 NUDT12Q9BQG2 462 aa12.8□□□□□ -0.36
TGFBR3-205ENST00000468996 PORCNQ9H237 461 aa12.8□□□□□ -0.36
TGFBR3-205ENST00000468996 RPAP3Q9H6T3 665 aaPredicted RBP12.8□□□□□ -0.36
TGFBR3-205ENST00000468996 SWAP70Q9UH65 585 aa12.8□□□□□ -0.36
TGFBR3-205ENST00000468996 ATAD5Q96QE3 1844 aa12.8□□□□□ -0.36
TGFBR3-205ENST00000468996 BRCA2P51587 3418 aa12.8□□□□□ -0.36
TGFBR3-205ENST00000468996 CDK5RAP2Q96SN8 1893 aa12.8□□□□□ -0.36
TGFBR3-205ENST00000468996 MYH1P12882 1939 aa12.8□□□□□ -0.36
TGFBR3-205ENST00000468996 MAPK4P31152 587 aa12.79□□□□□ -0.36
TGFBR3-205ENST00000468996 CDK8P49336 464 aa12.79□□□□□ -0.36
TGFBR3-205ENST00000468996 ATP2B2Q01814 1243 aa12.79□□□□□ -0.36
TGFBR3-205ENST00000468996 TRIM32Q13049 653 aa12.79□□□□□ -0.36
TGFBR3-205ENST00000468996 C12orf60Q5U649 245 aa12.79□□□□□ -0.36
TGFBR3-205ENST00000468996 POTEEQ6S8J3 1075 aa12.79□□□□□ -0.36
TGFBR3-205ENST00000468996 TMEM179Q6ZVK1 233 aa12.79□□□□□ -0.36
TGFBR3-205ENST00000468996 STK11IPQ8N1F8 1099 aa12.79□□□□□ -0.36
TGFBR3-205ENST00000468996 GTF3C2Q8WUA4 911 aaPredicted RBP12.79□□□□□ -0.36
TGFBR3-205ENST00000468996 GCC1Q96CN9 775 aa12.79□□□□□ -0.36
TGFBR3-205ENST00000468996 RABGAP1Q9Y3P9 1069 aa12.79□□□□□ -0.36
TGFBR3-205ENST00000468996 A0A1W2PRG0 241 aa12.78□□□□□ -0.36
TGFBR3-205ENST00000468996 H0YGN5 161 aa12.78□□□□□ -0.36
TGFBR3-205ENST00000468996 FARP2O94887 1054 aaPredicted RBP12.78□□□□□ -0.36
TGFBR3-205ENST00000468996 SLC34A2O95436 690 aa12.78□□□□□ -0.36
TGFBR3-205ENST00000468996 HMGCRP04035 888 aa12.78□□□□□ -0.36
TGFBR3-205ENST00000468996 AKR1B1P15121 316 aa12.78□□□□□ -0.36
TGFBR3-205ENST00000468996 RRP1P56182 461 aaKnown RBP12.78□□□□□ -0.36
TGFBR3-205ENST00000468996 CCNA1P78396 465 aa12.78□□□□□ -0.36
TGFBR3-205ENST00000468996 CTR9Q6PD62 1173 aa12.78□□□□□ -0.36
TGFBR3-205ENST00000468996 SAMD1Q6SPF0 538 aaPredicted RBP12.78□□□□□ -0.36
TGFBR3-205ENST00000468996 GPR142Q7Z601 462 aa12.78□□□□□ -0.36
TGFBR3-205ENST00000468996 PLEKHH3Q7Z736 793 aa12.78□□□□□ -0.36
TGFBR3-205ENST00000468996 CLEC10AQ8IUN9 316 aa12.78□□□□□ -0.36
TGFBR3-205ENST00000468996 KBTBD3Q8NAB2 608 aa12.78□□□□□ -0.36
TGFBR3-205ENST00000468996 TANGO6Q9C0B7 1094 aa12.78□□□□□ -0.36
TGFBR3-205ENST00000468996 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.78□□□□□ -0.36
TGFBR3-205ENST00000468996 HMX1Q9NP08 348 aaPredicted RBP12.78□□□□□ -0.36
TGFBR3-205ENST00000468996 ZBTB47Q9UFB7 747 aaPredicted RBP12.78□□□□□ -0.36
TGFBR3-205ENST00000468996 FOCADQ5VW36 1801 aa12.78□□□□□ -0.36
TGFBR3-205ENST00000468996 MGAMO43451 1857 aa12.78□□□□□ -0.36
TGFBR3-205ENST00000468996 MINDY4BA8MYZ0 360 aa12.77□□□□□ -0.37
TGFBR3-205ENST00000468996 RNF113AO15541 343 aaKnown RBP12.77□□□□□ -0.37
TGFBR3-205ENST00000468996 RAD21O60216 631 aa12.77□□□□□ -0.37
TGFBR3-205ENST00000468996 GLRX3O76003 335 aaKnown RBP12.77□□□□□ -0.37
TGFBR3-205ENST00000468996 APPP05067 770 aa12.77□□□□□ -0.37
TGFBR3-205ENST00000468996 COG2Q14746 738 aa12.77□□□□□ -0.37
TGFBR3-205ENST00000468996 SPICE1Q8N0Z3 855 aa12.77□□□□□ -0.37
TGFBR3-205ENST00000468996 SOCS4Q8WXH5 440 aa12.77□□□□□ -0.37
TGFBR3-205ENST00000468996 TRIB2Q92519 343 aa12.77□□□□□ -0.37
TGFBR3-205ENST00000468996 CCDC17Q96LX7 622 aa12.77□□□□□ -0.37
TGFBR3-205ENST00000468996 STRBPQ96SI9 672 aaKnown RBP12.77□□□□□ -0.37
TGFBR3-205ENST00000468996 CRBNQ96SW2 442 aa12.77□□□□□ -0.37
TGFBR3-205ENST00000468996 HTATIP2Q9BUP3 242 aa12.77□□□□□ -0.37
TGFBR3-205ENST00000468996 ARHGEF10LQ9HCE6 1279 aa12.77□□□□□ -0.37
TGFBR3-205ENST00000468996 PAK6Q9NQU5 681 aaPredicted RBP12.77□□□□□ -0.37
TGFBR3-205ENST00000468996 HOXC10Q9NYD6 342 aa12.77□□□□□ -0.37
TGFBR3-205ENST00000468996 LOC285556D6RIA3 1793 aa12.76□□□□□ -0.37
TGFBR3-205ENST00000468996 CNMDO75829 334 aa12.76□□□□□ -0.37
TGFBR3-205ENST00000468996 RGS2P41220 211 aa12.76□□□□□ -0.37
TGFBR3-205ENST00000468996 ICA1Q05084 483 aa12.76□□□□□ -0.37
TGFBR3-205ENST00000468996 ANKRD45Q5TZF3 282 aa12.76□□□□□ -0.37
TGFBR3-205ENST00000468996 SIAH1Q8IUQ4 282 aa12.76□□□□□ -0.37
TGFBR3-205ENST00000468996 OTUD7AQ8TE49 926 aaPredicted RBP12.76□□□□□ -0.37
TGFBR3-205ENST00000468996 OSBP2Q969R2 916 aa12.76□□□□□ -0.37
TGFBR3-205ENST00000468996 PAWRQ96IZ0 340 aaKnown RBP12.76□□□□□ -0.37
TGFBR3-205ENST00000468996 BTBD7Q9P203 1132 aa12.76□□□□□ -0.37
TGFBR3-205ENST00000468996 IVNS1ABPQ9Y6Y0 642 aa12.76□□□□□ -0.37
TGFBR3-205ENST00000468996 RPTORQ8N122 1335 aa12.76□□□□□ -0.37
TGFBR3-205ENST00000468996 RBBP6Q7Z6E9 1792 aaKnown RBP12.76□□□□□ -0.37
TGFBR3-205ENST00000468996 DOCK3Q8IZD9 2030 aa12.76□□□□□ -0.37
TGFBR3-205ENST00000468996 SPDYE16A6NNV3 312 aaPredicted RBP12.75□□□□□ -0.37
TGFBR3-205ENST00000468996 GSG1L2A8MUP6 293 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms