RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 SEC24BO95487 1268 aa13.45□□□□□ -0.26
COL4A6-205ENST00000468338 HLA-DOAP06340 250 aa13.45□□□□□ -0.26
COL4A6-205ENST00000468338 MX1P20591 662 aa13.45□□□□□ -0.26
COL4A6-205ENST00000468338 GABPAQ06546 454 aa13.45□□□□□ -0.26
COL4A6-205ENST00000468338 TAF1CQ15572 869 aaPredicted RBP13.45□□□□□ -0.26
COL4A6-205ENST00000468338 ANKRD45Q5TZF3 282 aa13.45□□□□□ -0.26
COL4A6-205ENST00000468338 ZSCAN25Q6NSZ9 544 aa13.45□□□□□ -0.26
COL4A6-205ENST00000468338 TTC6Q86TZ1 520 aa13.45□□□□□ -0.26
COL4A6-205ENST00000468338 RWDD1Q9H446 243 aaPredicted RBP13.45□□□□□ -0.26
COL4A6-205ENST00000468338 ZFYVE28Q9HCC9 887 aa13.45□□□□□ -0.26
COL4A6-205ENST00000468338 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.45□□□□□ -0.26
COL4A6-205ENST00000468338 SERPINB13Q9UIV8 391 aa13.45□□□□□ -0.26
COL4A6-205ENST00000468338 ADGRA2Q96PE1 1338 aa13.44□□□□□ -0.26
COL4A6-205ENST00000468338 MBD4O95243 580 aa13.44□□□□□ -0.26
COL4A6-205ENST00000468338 IGHDP01880 384 aa13.44□□□□□ -0.26
COL4A6-205ENST00000468338 ASNSP08243 561 aa13.44□□□□□ -0.26
COL4A6-205ENST00000468338 PLCD1P51178 756 aa13.44□□□□□ -0.26
COL4A6-205ENST00000468338 PKN2Q16513 984 aaKnown RBP13.44□□□□□ -0.26
COL4A6-205ENST00000468338 FASTKD5Q7L8L6 764 aaKnown RBP13.44□□□□□ -0.26
COL4A6-205ENST00000468338 CCDC84Q86UT8 332 aaPredicted RBP13.44□□□□□ -0.26
COL4A6-205ENST00000468338 ZNF280CQ8ND82 737 aa13.44□□□□□ -0.26
COL4A6-205ENST00000468338 SDR42E1Q8WUS8 393 aa13.44□□□□□ -0.26
COL4A6-205ENST00000468338 WDR18Q9BV38 432 aa13.44□□□□□ -0.26
COL4A6-205ENST00000468338 PUS7LQ9H0K6 701 aaKnown RBP13.44□□□□□ -0.26
COL4A6-205ENST00000468338 ARMT1Q9H993 441 aa13.44□□□□□ -0.26
COL4A6-205ENST00000468338 ATP8A2Q9NTI2 1148 aa13.44□□□□□ -0.26
COL4A6-205ENST00000468338 SLC45A1Q9Y2W3 748 aa13.44□□□□□ -0.26
COL4A6-205ENST00000468338 NAV1Q8NEY1 1877 aa13.44□□□□□ -0.26
COL4A6-205ENST00000468338 USP17L5A8MUK1 530 aa13.43□□□□□ -0.26
COL4A6-205ENST00000468338 PDHXO00330 501 aa13.43□□□□□ -0.26
COL4A6-205ENST00000468338 PRKAB2O43741 272 aa13.43□□□□□ -0.26
COL4A6-205ENST00000468338 ZFYP08048 801 aaPredicted RBP13.43□□□□□ -0.26
COL4A6-205ENST00000468338 PDE1AP54750 535 aa13.43□□□□□ -0.26
COL4A6-205ENST00000468338 CAP1Q01518 475 aa13.43□□□□□ -0.26
COL4A6-205ENST00000468338 SP3Q02447 781 aa13.43□□□□□ -0.26
COL4A6-205ENST00000468338 SPP2Q13103 211 aa13.43□□□□□ -0.26
COL4A6-205ENST00000468338 SH3D19Q5HYK7 790 aa13.43□□□□□ -0.26
COL4A6-205ENST00000468338 C17orf99Q6UX52 265 aa13.43□□□□□ -0.26
COL4A6-205ENST00000468338 PARP9Q8IXQ6 854 aa13.43□□□□□ -0.26
COL4A6-205ENST00000468338 CRACR2BQ8N4Y2 399 aaPredicted RBP13.43□□□□□ -0.26
COL4A6-205ENST00000468338 STRBPQ96SI9 672 aaKnown RBP13.43□□□□□ -0.26
COL4A6-205ENST00000468338 BAZ2AQ9UIF9 1905 aaKnown RBP13.43□□□□□ -0.26
COL4A6-205ENST00000468338 TRIM75PA6NK02 468 aa13.42□□□□□ -0.26
COL4A6-205ENST00000468338 RNF113AO15541 343 aaKnown RBP13.42□□□□□ -0.26
COL4A6-205ENST00000468338 SHMT1P34896 483 aa13.42□□□□□ -0.26
COL4A6-205ENST00000468338 EVX2Q03828 476 aa13.42□□□□□ -0.26
COL4A6-205ENST00000468338 SHROOM1Q2M3G4 852 aaPredicted RBP13.42□□□□□ -0.26
COL4A6-205ENST00000468338 PROCA1Q8NCQ7 364 aaPredicted RBP13.42□□□□□ -0.26
COL4A6-205ENST00000468338 APPBP2Q92624 585 aa13.42□□□□□ -0.26
COL4A6-205ENST00000468338 OSBP2Q969R2 916 aa13.42□□□□□ -0.26
COL4A6-205ENST00000468338 ERO1AQ96HE7 468 aa13.42□□□□□ -0.26
COL4A6-205ENST00000468338 MCM9Q9NXL9 1143 aa13.42□□□□□ -0.26
COL4A6-205ENST00000468338 ZBTB21Q9ULJ3 1066 aa13.42□□□□□ -0.26
COL4A6-205ENST00000468338 LOC285556D6RIA3 1793 aa13.41□□□□□ -0.26
COL4A6-205ENST00000468338 POLR3DP05423 398 aaPredicted RBP13.41□□□□□ -0.26
COL4A6-205ENST00000468338 NUCB1Q02818 461 aa13.41□□□□□ -0.26
COL4A6-205ENST00000468338 SLC4A8Q2Y0W8 1093 aa13.41□□□□□ -0.26
COL4A6-205ENST00000468338 C12orf60Q5U649 245 aa13.41□□□□□ -0.26
COL4A6-205ENST00000468338 TMEM92Q6UXU6 159 aa13.41□□□□□ -0.26
COL4A6-205ENST00000468338 OTOP1Q7RTM1 612 aa13.41□□□□□ -0.26
COL4A6-205ENST00000468338 TRIM34Q9BYJ4 488 aa13.41□□□□□ -0.26
COL4A6-205ENST00000468338 AS3MTQ9HBK9 375 aa13.41□□□□□ -0.26
COL4A6-205ENST00000468338 AGTPBP1Q9UPW5 1226 aa13.41□□□□□ -0.26
COL4A6-205ENST00000468338 GDF11O95390 407 aa13.4□□□□□ -0.26
COL4A6-205ENST00000468338 BCRP11274 1271 aa13.4□□□□□ -0.26
COL4A6-205ENST00000468338 FECHP22830 423 aa13.4□□□□□ -0.26
COL4A6-205ENST00000468338 BACE1P56817 501 aa13.4□□□□□ -0.26
COL4A6-205ENST00000468338 LRRFIP1Q32MZ4 808 aaKnown RBP13.4□□□□□ -0.26
COL4A6-205ENST00000468338 GIMAP6Q6P9H5 292 aa13.4□□□□□ -0.26
COL4A6-205ENST00000468338 FBXO46Q6PJ61 603 aaPredicted RBP13.4□□□□□ -0.26
COL4A6-205ENST00000468338 CHD1LQ86WJ1 897 aa13.4□□□□□ -0.26
COL4A6-205ENST00000468338 TICAM2Q86XR7 235 aa13.4□□□□□ -0.26
COL4A6-205ENST00000468338 CD99L2Q8TCZ2 262 aa13.4□□□□□ -0.26
COL4A6-205ENST00000468338 PARK7Q99497 189 aaKnown RBP13.4□□□□□ -0.26
COL4A6-205ENST00000468338 LNPKQ9C0E8 428 aa13.4□□□□□ -0.26
COL4A6-205ENST00000468338 OSBPL3Q9H4L5 887 aa13.4□□□□□ -0.26
COL4A6-205ENST00000468338 SLC4A4Q9Y6R1 1079 aa13.4□□□□□ -0.26
COL4A6-205ENST00000468338 GSG1L2A8MUP6 293 aa13.39□□□□□ -0.27
COL4A6-205ENST00000468338 C19orf81C9J6K1 198 aa13.39□□□□□ -0.27
COL4A6-205ENST00000468338 USP17L12C9JPN9 530 aa13.39□□□□□ -0.27
COL4A6-205ENST00000468338 USP17L21D6R901 530 aa13.39□□□□□ -0.27
COL4A6-205ENST00000468338 GH2P01242 217 aa13.39□□□□□ -0.27
COL4A6-205ENST00000468338 CYP2C8P10632 490 aa13.39□□□□□ -0.27
COL4A6-205ENST00000468338 CYP2D6P10635 497 aa13.39□□□□□ -0.27
COL4A6-205ENST00000468338 GUCY1A2P33402 732 aa13.39□□□□□ -0.27
COL4A6-205ENST00000468338 CERKLQ49MI3 558 aaPredicted RBP13.39□□□□□ -0.27
COL4A6-205ENST00000468338 SBK1Q52WX2 424 aa13.39□□□□□ -0.27
COL4A6-205ENST00000468338 ZMYM1Q5SVZ6 1142 aa13.39□□□□□ -0.27
COL4A6-205ENST00000468338 TREML2Q5T2D2 321 aa13.39□□□□□ -0.27
COL4A6-205ENST00000468338 SWAP70Q9UH65 585 aa13.39□□□□□ -0.27
COL4A6-205ENST00000468338 TRIM17Q9Y577 477 aa13.39□□□□□ -0.27
COL4A6-205ENST00000468338 USP17L10C9JJH3 530 aa13.38□□□□□ -0.27
COL4A6-205ENST00000468338 SMIM22K7EJ46 135 aa13.38□□□□□ -0.27
COL4A6-205ENST00000468338 GPAA1O43292 621 aa13.38□□□□□ -0.27
COL4A6-205ENST00000468338 HOXA7P31268 230 aaPredicted RBP13.38□□□□□ -0.27
COL4A6-205ENST00000468338 HMGCS2P54868 508 aa13.38□□□□□ -0.27
COL4A6-205ENST00000468338 LACTBP83111 547 aaPredicted RBP13.38□□□□□ -0.27
COL4A6-205ENST00000468338 PTGDRQ13258 359 aa13.38□□□□□ -0.27
COL4A6-205ENST00000468338 ABCB5Q2M3G0 1257 aa13.38□□□□□ -0.27
COL4A6-205ENST00000468338 CTR9Q6PD62 1173 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms