RNA–Protein interactions for RNA: ENST00000466939.1

LAMP3-202, Transcript of lysosomal associated membrane protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LAMP3, Length 1,453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-202ENST00000466939 SAFBQ15424 915 aaKnown RBP eCLIP14.11□□□□□ -0.15
LAMP3-202ENST00000466939 RSBN1LQ6PCB5 846 aaPredicted RBP14.11□□□□□ -0.15
LAMP3-202ENST00000466939 ILDR1Q86SU0 546 aaPredicted RBP14.11□□□□□ -0.15
LAMP3-202ENST00000466939 PNMA1Q8ND90 353 aa14.11□□□□□ -0.15
LAMP3-202ENST00000466939 UPF1Q92900 1129 aaKnown RBP eCLIP14.11□□□□□ -0.15
LAMP3-202ENST00000466939 TMEM63CQ9P1W3 806 aa14.11□□□□□ -0.15
LAMP3-202ENST00000466939 SWAP70Q9UH65 585 aa14.11□□□□□ -0.15
LAMP3-202ENST00000466939 STX8Q9UNK0 236 aa14.11□□□□□ -0.15
LAMP3-202ENST00000466939 MYH15Q9Y2K3 1946 aa14.11□□□□□ -0.15
LAMP3-202ENST00000466939 PCDHAC2Q9Y5I4 1007 aa14.11□□□□□ -0.15
LAMP3-202ENST00000466939 KIF28PB7ZC32 967 aa14.1□□□□□ -0.15
LAMP3-202ENST00000466939 UBE2Q2LH0YL09 131 aa14.1□□□□□ -0.15
LAMP3-202ENST00000466939 PSMD14O00487 310 aa14.1□□□□□ -0.15
LAMP3-202ENST00000466939 GUCY1A2P33402 732 aa14.1□□□□□ -0.15
LAMP3-202ENST00000466939 TRIM34Q9BYJ4 488 aa14.1□□□□□ -0.15
LAMP3-202ENST00000466939 TAOK3Q9H2K8 898 aa14.1□□□□□ -0.15
LAMP3-202ENST00000466939 SERPINB13Q9UIV8 391 aa14.1□□□□□ -0.15
LAMP3-202ENST00000466939 HDAC9Q9UKV0 1011 aa14.1□□□□□ -0.15
LAMP3-202ENST00000466939 ZNRF3Q9ULT6 936 aa14.1□□□□□ -0.15
LAMP3-202ENST00000466939 CD2APQ9Y5K6 639 aa14.1□□□□□ -0.15
LAMP3-202ENST00000466939 CNTNAP5Q8WYK1 1306 aa14.09□□□□□ -0.15
LAMP3-202ENST00000466939 PRPF3O43395 683 aaKnown RBP14.09□□□□□ -0.15
LAMP3-202ENST00000466939 XBP1P17861 261 aa14.09□□□□□ -0.15
LAMP3-202ENST00000466939 ZNF445P59923 1031 aa14.09□□□□□ -0.15
LAMP3-202ENST00000466939 GABPAQ06546 454 aa14.09□□□□□ -0.15
LAMP3-202ENST00000466939 GRM4Q14833 912 aa14.09□□□□□ -0.15
LAMP3-202ENST00000466939 CCDC183Q5T5S1 534 aa14.09□□□□□ -0.15
LAMP3-202ENST00000466939 USP28Q96RU2 1077 aa14.09□□□□□ -0.15
LAMP3-202ENST00000466939 TMEM47Q9BQJ4 181 aa14.09□□□□□ -0.15
LAMP3-202ENST00000466939 IDI2Q9BXS1 227 aa14.09□□□□□ -0.15
LAMP3-202ENST00000466939 TMOD2Q9NZR1 351 aa14.09□□□□□ -0.15
LAMP3-202ENST00000466939 ISY1Q9ULR0 285 aaKnown RBP14.09□□□□□ -0.15
LAMP3-202ENST00000466939 PSME4Q14997 1843 aa14.09□□□□□ -0.15
LAMP3-202ENST00000466939 COL4A5P29400 1685 aa14.09□□□□□ -0.15
LAMP3-202ENST00000466939 PLIN4Q96Q06 1357 aa14.08□□□□□ -0.15
LAMP3-202ENST00000466939 FSD2A1L4K1 749 aa14.08□□□□□ -0.16
LAMP3-202ENST00000466939 VIL1P09327 827 aaKnown RBP14.08□□□□□ -0.16
LAMP3-202ENST00000466939 GNAQP50148 359 aa14.08□□□□□ -0.16
LAMP3-202ENST00000466939 FUT2Q10981 343 aa14.08□□□□□ -0.16
LAMP3-202ENST00000466939 TCP10Q12799 353 aa14.08□□□□□ -0.16
LAMP3-202ENST00000466939 MYSM1Q5VVJ2 828 aa14.08□□□□□ -0.16
LAMP3-202ENST00000466939 ZSCAN29Q8IWY8 852 aaPredicted RBP14.08□□□□□ -0.16
LAMP3-202ENST00000466939 BICD2Q8TD16 824 aa14.08□□□□□ -0.16
LAMP3-202ENST00000466939 MAP3K14Q99558 947 aa14.08□□□□□ -0.16
LAMP3-202ENST00000466939 FTOQ9C0B1 505 aaKnown RBP eCLIP14.08□□□□□ -0.16
LAMP3-202ENST00000466939 DHX36Q9H2U1 1008 aaKnown RBP14.08□□□□□ -0.16
LAMP3-202ENST00000466939 TDRD3Q9H7E2 651 aaKnown RBP14.08□□□□□ -0.16
LAMP3-202ENST00000466939 MTMR7Q9Y216 660 aa14.08□□□□□ -0.16
LAMP3-202ENST00000466939 BCS1LQ9Y276 419 aa14.08□□□□□ -0.16
LAMP3-202ENST00000466939 V9GY48 417 aaPredicted RBP14.08□□□□□ -0.16
LAMP3-202ENST00000466939 SYCE3A1L190 88 aa14.07□□□□□ -0.16
LAMP3-202ENST00000466939 MMP1P03956 469 aa14.07□□□□□ -0.16
LAMP3-202ENST00000466939 TOP1P11387 765 aaKnown RBP14.07□□□□□ -0.16
LAMP3-202ENST00000466939 AKR1B1P15121 316 aa14.07□□□□□ -0.16
LAMP3-202ENST00000466939 STK38Q15208 465 aa14.07□□□□□ -0.16
LAMP3-202ENST00000466939 ZFPM1Q8IX07 1006 aa14.07□□□□□ -0.16
LAMP3-202ENST00000466939 OGFOD1Q8N543 542 aa14.07□□□□□ -0.16
LAMP3-202ENST00000466939 SRBD1Q8N5C6 995 aaKnown RBP14.07□□□□□ -0.16
LAMP3-202ENST00000466939 JDP2Q8WYK2 163 aa14.07□□□□□ -0.16
LAMP3-202ENST00000466939 CEP95Q96GE4 821 aa14.07□□□□□ -0.16
LAMP3-202ENST00000466939 EHD4Q9H223 541 aa14.07□□□□□ -0.16
LAMP3-202ENST00000466939 RTEL1Q9NZ71 1219 aa14.07□□□□□ -0.16
LAMP3-202ENST00000466939 FAM198AQ9UFP1 575 aa14.07□□□□□ -0.16
LAMP3-202ENST00000466939 RCOR1Q9UKL0 485 aa14.07□□□□□ -0.16
LAMP3-202ENST00000466939 KCNJ14Q9UNX9 436 aa14.07□□□□□ -0.16
LAMP3-202ENST00000466939 hCG_1642624A0A1W2PR95 340 aa14.06□□□□□ -0.16
LAMP3-202ENST00000466939 MPHOSPH10O00566 681 aaKnown RBP14.06□□□□□ -0.16
LAMP3-202ENST00000466939 NPM3O75607 178 aaKnown RBP14.06□□□□□ -0.16
LAMP3-202ENST00000466939 DLGAP5Q15398 846 aa14.06□□□□□ -0.16
LAMP3-202ENST00000466939 DIS3L2Q8IYB7 885 aaKnown RBP14.06□□□□□ -0.16
LAMP3-202ENST00000466939 SGIP1Q9BQI5 828 aa14.06□□□□□ -0.16
LAMP3-202ENST00000466939 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.06□□□□□ -0.16
LAMP3-202ENST00000466939 ZBTB12Q9Y330 459 aaPredicted RBP14.06□□□□□ -0.16
LAMP3-202ENST00000466939 ENTPD3O75355 529 aa14.06□□□□□ -0.16
LAMP3-202ENST00000466939 SHMT1P34896 483 aa14.06□□□□□ -0.16
LAMP3-202ENST00000466939 SF3A1Q15459 793 aaKnown RBP14.06□□□□□ -0.16
LAMP3-202ENST00000466939 PKN1Q16512 942 aa14.06□□□□□ -0.16
LAMP3-202ENST00000466939 PIBF1Q8WXW3 757 aa14.06□□□□□ -0.16
LAMP3-202ENST00000466939 PRMT6Q96LA8 375 aaPredicted RBP14.06□□□□□ -0.16
LAMP3-202ENST00000466939 VPS54Q9P1Q0 977 aa14.06□□□□□ -0.16
LAMP3-202ENST00000466939 PI4KBQ9UBF8 816 aa14.06□□□□□ -0.16
LAMP3-202ENST00000466939 BRCA1P38398 1863 aaKnown RBP14.05□□□□□ -0.16
LAMP3-202ENST00000466939 DDTLA6NHG4 134 aaPredicted RBP14.05□□□□□ -0.16
LAMP3-202ENST00000466939 SPDYE2BA6NHP3 402 aa14.05□□□□□ -0.16
LAMP3-202ENST00000466939 LETM1O95202 739 aaPredicted RBP14.05□□□□□ -0.16
LAMP3-202ENST00000466939 YEATS4O95619 227 aa14.05□□□□□ -0.16
LAMP3-202ENST00000466939 SPDYE6P0CI01 402 aa14.05□□□□□ -0.16
LAMP3-202ENST00000466939 U2AF2P26368 475 aaKnown RBP eCLIP14.05□□□□□ -0.16
LAMP3-202ENST00000466939 ME1P48163 572 aa14.05□□□□□ -0.16
LAMP3-202ENST00000466939 MRE11P49959 708 aa14.05□□□□□ -0.16
LAMP3-202ENST00000466939 PPP4R3BQ5MIZ7 849 aa14.05□□□□□ -0.16
LAMP3-202ENST00000466939 ANO1Q5XXA6 986 aa14.05□□□□□ -0.16
LAMP3-202ENST00000466939 CIAPIN1Q6FI81 312 aa14.05□□□□□ -0.16
LAMP3-202ENST00000466939 GAS2L3Q86XJ1 694 aa14.05□□□□□ -0.16
LAMP3-202ENST00000466939 NOSTRINQ8IVI9 506 aa14.05□□□□□ -0.16
LAMP3-202ENST00000466939 AGBL3Q8NEM8 1001 aa14.05□□□□□ -0.16
LAMP3-202ENST00000466939 KCNG4Q8TDN1 519 aa14.05□□□□□ -0.16
LAMP3-202ENST00000466939 PGBD1Q96JS3 809 aa14.05□□□□□ -0.16
LAMP3-202ENST00000466939 GMLQ99445 158 aa14.05□□□□□ -0.16
LAMP3-202ENST00000466939 LZTS2Q9BRK4 669 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms