RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 CCDC136Q96JN2 1154 aa11.31□□□□□ -0.6
SDCCAG3-208ENST00000466579 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.31□□□□□ -0.6
SDCCAG3-208ENST00000466579 KIAA1683Q9H0B3 1180 aa11.31□□□□□ -0.6
SDCCAG3-208ENST00000466579 NAPBQ9H115 298 aa11.31□□□□□ -0.6
SDCCAG3-208ENST00000466579 ZFYVE28Q9HCC9 887 aa11.31□□□□□ -0.6
SDCCAG3-208ENST00000466579 CABP5Q9NP86 173 aa11.31□□□□□ -0.6
SDCCAG3-208ENST00000466579 RAD50Q92878 1312 aa11.31□□□□□ -0.6
SDCCAG3-208ENST00000466579 LAMA4Q16363 1823 aa11.3□□□□□ -0.6
SDCCAG3-208ENST00000466579 PLIN4Q96Q06 1357 aa11.3□□□□□ -0.6
SDCCAG3-208ENST00000466579 MINDY4BA8MYZ0 360 aa11.3□□□□□ -0.6
SDCCAG3-208ENST00000466579 FGAP02671 866 aa11.3□□□□□ -0.6
SDCCAG3-208ENST00000466579 CHMLP26374 656 aa11.3□□□□□ -0.6
SDCCAG3-208ENST00000466579 HOXA7P31268 230 aaPredicted RBP11.3□□□□□ -0.6
SDCCAG3-208ENST00000466579 HMGCS2P54868 508 aa11.3□□□□□ -0.6
SDCCAG3-208ENST00000466579 PPARAQ07869 468 aa11.3□□□□□ -0.6
SDCCAG3-208ENST00000466579 MTMR2Q13614 643 aa11.3□□□□□ -0.6
SDCCAG3-208ENST00000466579 SEPT2Q15019 361 aa11.3□□□□□ -0.6
SDCCAG3-208ENST00000466579 TREML2Q5T2D2 321 aa11.3□□□□□ -0.6
SDCCAG3-208ENST00000466579 C17orf99Q6UX52 265 aa11.3□□□□□ -0.6
SDCCAG3-208ENST00000466579 SIAH1Q8IUQ4 282 aa11.3□□□□□ -0.6
SDCCAG3-208ENST00000466579 DIAPH3Q9NSV4 1193 aa11.3□□□□□ -0.6
SDCCAG3-208ENST00000466579 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.3□□□□□ -0.6
SDCCAG3-208ENST00000466579 IGKV6D-41A0A0C4DH26 115 aa11.29□□□□□ -0.6
SDCCAG3-208ENST00000466579 FKTNO75072 461 aa11.29□□□□□ -0.6
SDCCAG3-208ENST00000466579 BCRP11274 1271 aa11.29□□□□□ -0.6
SDCCAG3-208ENST00000466579 USP14P54578 494 aa11.29□□□□□ -0.6
SDCCAG3-208ENST00000466579 RAB3GAP1Q15042 981 aa11.29□□□□□ -0.6
SDCCAG3-208ENST00000466579 BMP2KLQ5H9B9 411 aa11.29□□□□□ -0.6
SDCCAG3-208ENST00000466579 USP17L2Q6R6M4 530 aa11.29□□□□□ -0.6
SDCCAG3-208ENST00000466579 CWC27Q6UX04 472 aaKnown RBP11.29□□□□□ -0.6
SDCCAG3-208ENST00000466579 GADL1Q6ZQY3 521 aa11.29□□□□□ -0.6
SDCCAG3-208ENST00000466579 ACER1Q8TDN7 264 aa11.29□□□□□ -0.6
SDCCAG3-208ENST00000466579 PARK7Q99497 189 aaKnown RBP11.29□□□□□ -0.6
SDCCAG3-208ENST00000466579 DSCC1Q9BVC3 393 aa11.29□□□□□ -0.6
SDCCAG3-208ENST00000466579 IL25Q9H293 177 aa11.29□□□□□ -0.6
SDCCAG3-208ENST00000466579 ZNF287Q9HBT7 754 aa11.29□□□□□ -0.6
SDCCAG3-208ENST00000466579 EMILIN3Q9NT22 766 aa11.29□□□□□ -0.6
SDCCAG3-208ENST00000466579 PPP4R2Q9NY27 417 aa11.29□□□□□ -0.6
SDCCAG3-208ENST00000466579 A0A1W2PRG0 241 aa11.28□□□□□ -0.6
SDCCAG3-208ENST00000466579 SLC3A2P08195 630 aaKnown RBP11.28□□□□□ -0.6
SDCCAG3-208ENST00000466579 PDE4BQ07343 736 aa11.28□□□□□ -0.6
SDCCAG3-208ENST00000466579 PABPC4Q13310 644 aaKnown RBP eCLIP11.28□□□□□ -0.63e-6■□□□□ 9
SDCCAG3-208ENST00000466579 KANSL2Q9H9L4 492 aa11.28□□□□□ -0.6
SDCCAG3-208ENST00000466579 TMX2Q9Y320 296 aa11.28□□□□□ -0.6
SDCCAG3-208ENST00000466579 TACC3Q9Y6A5 838 aa11.28□□□□□ -0.6
SDCCAG3-208ENST00000466579 RLFQ13129 1914 aa11.27□□□□□ -0.6
SDCCAG3-208ENST00000466579 ORC4O43929 436 aa11.27□□□□□ -0.61
SDCCAG3-208ENST00000466579 PCP11498 1178 aaKnown RBP11.27□□□□□ -0.61
SDCCAG3-208ENST00000466579 NOVP48745 357 aa11.27□□□□□ -0.61
SDCCAG3-208ENST00000466579 NT5C2P49902 561 aa11.27□□□□□ -0.61
SDCCAG3-208ENST00000466579 CAP1Q01518 475 aa11.27□□□□□ -0.61
SDCCAG3-208ENST00000466579 SP3Q02447 781 aa11.27□□□□□ -0.61
SDCCAG3-208ENST00000466579 ICA1Q05084 483 aa11.27□□□□□ -0.61
SDCCAG3-208ENST00000466579 DGKZQ13574 1117 aa11.27□□□□□ -0.61
SDCCAG3-208ENST00000466579 SKAP1Q86WV1 359 aa11.27□□□□□ -0.61
SDCCAG3-208ENST00000466579 NEDD1Q8NHV4 660 aa11.27□□□□□ -0.61
SDCCAG3-208ENST00000466579 ERO1AQ96HE7 468 aa11.27□□□□□ -0.61
SDCCAG3-208ENST00000466579 NBPF3Q9H094 633 aa11.27□□□□□ -0.61
SDCCAG3-208ENST00000466579 MKNK2Q9HBH9 465 aa11.27□□□□□ -0.61
SDCCAG3-208ENST00000466579 TMOD4Q9NZQ9 345 aa11.27□□□□□ -0.61
SDCCAG3-208ENST00000466579 NYAP2Q9P242 653 aa11.27□□□□□ -0.61
SDCCAG3-208ENST00000466579 PNMA3Q9UL41 463 aa11.27□□□□□ -0.61
SDCCAG3-208ENST00000466579 SYNPO2Q9UMS6 1093 aa11.27□□□□□ -0.61
SDCCAG3-208ENST00000466579 PARP14Q460N5 1801 aa11.26□□□□□ -0.61
SDCCAG3-208ENST00000466579 MGAMO43451 1857 aa11.26□□□□□ -0.61
SDCCAG3-208ENST00000466579 MPHOSPH10O00566 681 aaKnown RBP11.26□□□□□ -0.61
SDCCAG3-208ENST00000466579 SGSM2O43147 1006 aa11.26□□□□□ -0.61
SDCCAG3-208ENST00000466579 CYP2C8P10632 490 aa11.26□□□□□ -0.61
SDCCAG3-208ENST00000466579 OSBPP22059 807 aa11.26□□□□□ -0.61
SDCCAG3-208ENST00000466579 CTU1Q7Z7A3 348 aaKnown RBP11.26□□□□□ -0.61
SDCCAG3-208ENST00000466579 ZNF444Q8N0Y2 327 aaPredicted RBP11.26□□□□□ -0.61
SDCCAG3-208ENST00000466579 RUFY2Q8WXA3 655 aa11.26□□□□□ -0.61
SDCCAG3-208ENST00000466579 LPAR1Q92633 364 aa11.26□□□□□ -0.61
SDCCAG3-208ENST00000466579 MKL1Q969V6 931 aa11.26□□□□□ -0.61
SDCCAG3-208ENST00000466579 ASCC2Q9H1I8 757 aaPredicted RBP11.26□□□□□ -0.61
SDCCAG3-208ENST00000466579 SH2D4AQ9H788 454 aa11.26□□□□□ -0.61
SDCCAG3-208ENST00000466579 ARHGEF10LQ9HCE6 1279 aa11.26□□□□□ -0.61
SDCCAG3-208ENST00000466579 MYH4Q9Y623 1939 aa11.26□□□□□ -0.61
SDCCAG3-208ENST00000466579 HTTP42858 3142 aa11.26□□□□□ -0.61
SDCCAG3-208ENST00000466579 USP17L15C9J2P7 530 aa11.25□□□□□ -0.61
SDCCAG3-208ENST00000466579 USP17L13C9JLJ4 530 aa11.25□□□□□ -0.61
SDCCAG3-208ENST00000466579 USP17L11C9JVI0 530 aa11.25□□□□□ -0.61
SDCCAG3-208ENST00000466579 USP17L18D6R9N7 530 aa11.25□□□□□ -0.61
SDCCAG3-208ENST00000466579 USP17L22D6RA61 530 aa11.25□□□□□ -0.61
SDCCAG3-208ENST00000466579 USP17L17D6RBQ6 530 aa11.25□□□□□ -0.61
SDCCAG3-208ENST00000466579 USP17L19D6RCP7 530 aa11.25□□□□□ -0.61
SDCCAG3-208ENST00000466579 USP17L20D6RJB6 530 aa11.25□□□□□ -0.61
SDCCAG3-208ENST00000466579 PRDM1O75626 825 aa11.25□□□□□ -0.61
SDCCAG3-208ENST00000466579 EEF2P13639 858 aaKnown RBP11.25□□□□□ -0.61
SDCCAG3-208ENST00000466579 VCAM1P19320 739 aa11.25□□□□□ -0.61
SDCCAG3-208ENST00000466579 GCLCP48506 637 aaPredicted RBP11.25□□□□□ -0.61
SDCCAG3-208ENST00000466579 LACTBP83111 547 aaPredicted RBP11.25□□□□□ -0.61
SDCCAG3-208ENST00000466579 CTDSPL2Q05D32 466 aa11.25□□□□□ -0.61
SDCCAG3-208ENST00000466579 USP17L24Q0WX57 530 aa11.25□□□□□ -0.61
SDCCAG3-208ENST00000466579 PKN2Q16513 984 aaKnown RBP11.25□□□□□ -0.61
SDCCAG3-208ENST00000466579 FAM110CQ1W6H9 321 aa11.25□□□□□ -0.61
SDCCAG3-208ENST00000466579 KIAA1755Q5JYT7 1200 aa11.25□□□□□ -0.61
SDCCAG3-208ENST00000466579 LBX2Q6XYB7 198 aa11.25□□□□□ -0.61
SDCCAG3-208ENST00000466579 CATSPERGQ6ZRH7 1159 aa11.25□□□□□ -0.61
SDCCAG3-208ENST00000466579 CLEC10AQ8IUN9 316 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms