RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 NLRP3Q96P20 1036 aa11.91□□□□□ -0.5
UFD1-206ENST00000466373 SETDB2Q96T68 719 aa11.91□□□□□ -0.5
UFD1-206ENST00000466373 BRIP1Q9BX63 1249 aa11.91□□□□□ -0.5
UFD1-206ENST00000466373 DCP1AQ9NPI6 582 aaPredicted RBP11.91□□□□□ -0.5
UFD1-206ENST00000466373 SAMSN1Q9NSI8 373 aaKnown RBP11.91□□□□□ -0.5
UFD1-206ENST00000466373 CEP131Q9UPN4 1083 aa11.91□□□□□ -0.5
UFD1-206ENST00000466373 GNPATO15228 680 aa11.9□□□□□ -0.5
UFD1-206ENST00000466373 CBFA2T2O43439 604 aa11.9□□□□□ -0.5
UFD1-206ENST00000466373 ACTN4O43707 911 aaKnown RBP11.9□□□□□ -0.5
UFD1-206ENST00000466373 STX17P56962 302 aa11.9□□□□□ -0.5
UFD1-206ENST00000466373 VSTM4Q8IW00 320 aa11.9□□□□□ -0.5
UFD1-206ENST00000466373 SMYD4Q8IYR2 804 aaPredicted RBP11.9□□□□□ -0.5
UFD1-206ENST00000466373 FAM177A1Q8N128 213 aaPredicted RBP11.9□□□□□ -0.5
UFD1-206ENST00000466373 SYMPKQ92797 1274 aaKnown RBP11.9□□□□□ -0.5
UFD1-206ENST00000466373 PHF20Q9BVI0 1012 aa11.9□□□□□ -0.5
UFD1-206ENST00000466373 ADAMTS3O15072 1205 aa11.9□□□□□ -0.5
UFD1-206ENST00000466373 COBLO75128 1261 aa11.9□□□□□ -0.5
UFD1-206ENST00000466373 FBXO33Q7Z6M2 555 aa11.9□□□□□ -0.5
UFD1-206ENST00000466373 AMIGO3Q86WK7 504 aa11.9□□□□□ -0.5
UFD1-206ENST00000466373 SRBD1Q8N5C6 995 aaKnown RBP11.9□□□□□ -0.5
UFD1-206ENST00000466373 MED15Q96RN5 788 aa11.9□□□□□ -0.5
UFD1-206ENST00000466373 MTA3Q9BTC8 594 aa11.9□□□□□ -0.5
UFD1-206ENST00000466373 VWA3AA6NCI4 1184 aa11.9□□□□□ -0.51
UFD1-206ENST00000466373 PRPF3O43395 683 aaKnown RBP11.9□□□□□ -0.51
UFD1-206ENST00000466373 ADKP55263 362 aaKnown RBP11.9□□□□□ -0.51
UFD1-206ENST00000466373 RCAN1P53805 252 aa11.89□□□□□ -0.51
UFD1-206ENST00000466373 CTCFLQ8NI51 663 aaPredicted RBP11.89□□□□□ -0.51
UFD1-206ENST00000466373 C8orf37Q96NL8 207 aa11.89□□□□□ -0.51
UFD1-206ENST00000466373 MCM9Q9NXL9 1143 aa11.89□□□□□ -0.51
UFD1-206ENST00000466373 DUOX1Q9NRD9 1551 aa11.89□□□□□ -0.51
UFD1-206ENST00000466373 TSPY2A6NKD2 308 aa11.89□□□□□ -0.51
UFD1-206ENST00000466373 ZPR1O75312 459 aa11.89□□□□□ -0.51
UFD1-206ENST00000466373 USP17L8P0C7I0 530 aa11.89□□□□□ -0.51
UFD1-206ENST00000466373 SARSP49591 514 aaKnown RBP11.89□□□□□ -0.51
UFD1-206ENST00000466373 MORC3Q14149 939 aa11.89□□□□□ -0.51
UFD1-206ENST00000466373 ELF2Q15723 593 aa11.89□□□□□ -0.51
UFD1-206ENST00000466373 PIK3AP1Q6ZUJ8 805 aa11.89□□□□□ -0.51
UFD1-206ENST00000466373 TMTC3Q6ZXV5 915 aa11.89□□□□□ -0.51
UFD1-206ENST00000466373 ZNF579Q8NAF0 562 aaKnown RBP11.89□□□□□ -0.51
UFD1-206ENST00000466373 LRRN4CLQ8ND94 238 aa11.89□□□□□ -0.51
UFD1-206ENST00000466373 CRNKL1Q9BZJ0 848 aaKnown RBP11.89□□□□□ -0.51
UFD1-206ENST00000466373 TMX1Q9H3N1 280 aa11.89□□□□□ -0.51
UFD1-206ENST00000466373 COL22A1Q8NFW1 1626 aaPredicted RBP11.88□□□□□ -0.51
UFD1-206ENST00000466373 PTGDRQ13258 359 aa11.88□□□□□ -0.51
UFD1-206ENST00000466373 BARGINQ6ZT62 677 aa11.88□□□□□ -0.51
UFD1-206ENST00000466373 MLKLQ8NB16 471 aa11.88□□□□□ -0.51
UFD1-206ENST00000466373 DNAI1Q9UI46 699 aa11.88□□□□□ -0.51
UFD1-206ENST00000466373 AHDC1Q5TGY3 1603 aaPredicted RBP11.88□□□□□ -0.51
UFD1-206ENST00000466373 MCM7P33993 719 aa11.88□□□□□ -0.51
UFD1-206ENST00000466373 NLRP5P59047 1200 aa11.88□□□□□ -0.51
UFD1-206ENST00000466373 PPP2R5BQ15173 497 aa11.88□□□□□ -0.51
UFD1-206ENST00000466373 NPY5RQ15761 445 aa11.88□□□□□ -0.51
UFD1-206ENST00000466373 DZIP1Q86YF9 867 aaKnown RBP11.88□□□□□ -0.51
UFD1-206ENST00000466373 GPR101Q96P66 508 aaPredicted RBP11.88□□□□□ -0.51
UFD1-206ENST00000466373 BRMS1Q9HCU9 246 aa11.88□□□□□ -0.51
UFD1-206ENST00000466373 LAMB2P55268 1798 aa11.88□□□□□ -0.51
UFD1-206ENST00000466373 PSDA5PKW4 1024 aaPredicted RBP11.88□□□□□ -0.51
UFD1-206ENST00000466373 TTC38Q5R3I4 469 aa11.88□□□□□ -0.51
UFD1-206ENST00000466373 NT5DC1Q5TFE4 455 aa11.88□□□□□ -0.51
UFD1-206ENST00000466373 DYNLL2Q96FJ2 89 aa11.88□□□□□ -0.51
UFD1-206ENST00000466373 RBM28Q9NW13 759 aaKnown RBP11.88□□□□□ -0.51
UFD1-206ENST00000466373 ANKIB1Q9P2G1 1089 aa11.88□□□□□ -0.51
UFD1-206ENST00000466373 CNTNAP5Q8WYK1 1306 aa11.87□□□□□ -0.51
UFD1-206ENST00000466373 NRAPQ86VF7 1730 aa11.87□□□□□ -0.51
UFD1-206ENST00000466373 CD44P16070 742 aaKnown RBP11.87□□□□□ -0.51
UFD1-206ENST00000466373 CDC25AP30304 524 aa11.87□□□□□ -0.51
UFD1-206ENST00000466373 GPKOWQ92917 476 aaPredicted RBP eCLIP11.87□□□□□ -0.51
UFD1-206ENST00000466373 PAGE5Q96GU1 130 aa11.87□□□□□ -0.51
UFD1-206ENST00000466373 NGLY1Q96IV0 654 aa11.87□□□□□ -0.51
UFD1-206ENST00000466373 BLZF1Q9H2G9 400 aa11.87□□□□□ -0.51
UFD1-206ENST00000466373 KCND1Q9NSA2 647 aa11.87□□□□□ -0.51
UFD1-206ENST00000466373 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.87□□□□□ -0.51
UFD1-206ENST00000466373 SLU7O95391 586 aaKnown RBP11.87□□□□□ -0.51
UFD1-206ENST00000466373 ZNF18P17022 549 aa11.87□□□□□ -0.51
UFD1-206ENST00000466373 DIXDC1Q155Q3 683 aa11.87□□□□□ -0.51
UFD1-206ENST00000466373 SLC10A5Q5PT55 438 aa11.87□□□□□ -0.51
UFD1-206ENST00000466373 RASGRP4Q8TDF6 673 aa11.87□□□□□ -0.51
UFD1-206ENST00000466373 NARFQ9UHQ1 456 aa11.87□□□□□ -0.51
UFD1-206ENST00000466373 RREB1Q92766 1687 aa11.86□□□□□ -0.51
UFD1-206ENST00000466373 FGRP09769 529 aa11.86□□□□□ -0.51
UFD1-206ENST00000466373 CALM1P0DP23 149 aa11.86□□□□□ -0.51
UFD1-206ENST00000466373 CALM2P0DP24 149 aa11.86□□□□□ -0.51
UFD1-206ENST00000466373 CALM3P0DP25 149 aa11.86□□□□□ -0.51
UFD1-206ENST00000466373 KANK3Q6NY19 840 aa11.86□□□□□ -0.51
UFD1-206ENST00000466373 TPTE2Q6XPS3 522 aa11.86□□□□□ -0.51
UFD1-206ENST00000466373 CREBRFQ8IUR6 639 aa11.86□□□□□ -0.51
UFD1-206ENST00000466373 ENOX1Q8TC92 643 aaKnown RBP11.86□□□□□ -0.51
UFD1-206ENST00000466373 DACH1Q9UI36 760 aa11.86□□□□□ -0.51
UFD1-206ENST00000466373 KIF2AO00139 706 aaPredicted RBP11.86□□□□□ -0.51
UFD1-206ENST00000466373 TEX33O43247 280 aa11.86□□□□□ -0.51
UFD1-206ENST00000466373 DDAH1O94760 285 aa11.86□□□□□ -0.51
UFD1-206ENST00000466373 SLFN14P0C7P3 912 aa11.86□□□□□ -0.51
UFD1-206ENST00000466373 SCG2P13521 617 aa11.86□□□□□ -0.51
UFD1-206ENST00000466373 TFAP4Q01664 338 aa11.86□□□□□ -0.51
UFD1-206ENST00000466373 ERCC6LQ2NKX8 1250 aa11.86□□□□□ -0.51
UFD1-206ENST00000466373 SPECC1LQ69YQ0 1117 aa11.86□□□□□ -0.51
UFD1-206ENST00000466373 CPLX3Q8WVH0 158 aa11.86□□□□□ -0.51
UFD1-206ENST00000466373 NYXQ9GZU5 481 aa11.86□□□□□ -0.51
UFD1-206ENST00000466373 CASZ1Q86V15 1759 aa11.86□□□□□ -0.51
UFD1-206ENST00000466373 FANCGO15287 622 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms