RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 ALDH1A1P00352 501 aa21.81■■□□□ 1.08
HOXA9-203ENST00000465941 MFSD6Q6ZSS7 791 aa21.81■■□□□ 1.08
HOXA9-203ENST00000465941 SIAH1Q8IUQ4 282 aa21.81■■□□□ 1.08
HOXA9-203ENST00000465941 RNF41Q9H4P4 317 aaPredicted RBP21.81■■□□□ 1.08
HOXA9-203ENST00000465941 ZCCHC17Q9NP64 241 aaKnown RBP21.81■■□□□ 1.08
HOXA9-203ENST00000465941 RNF186Q9NXI6 227 aa21.81■■□□□ 1.08
HOXA9-203ENST00000465941 BTBD19C9JJ37 291 aa21.8■■□□□ 1.08
HOXA9-203ENST00000465941 TFAP4Q01664 338 aa21.8■■□□□ 1.08
HOXA9-203ENST00000465941 MTMR2Q13614 643 aa21.8■■□□□ 1.08
HOXA9-203ENST00000465941 IFFO2Q5TF58 517 aa21.8■■□□□ 1.08
HOXA9-203ENST00000465941 TBC1D10CQ8IV04 446 aa21.8■■□□□ 1.08
HOXA9-203ENST00000465941 PROCA1Q8NCQ7 364 aaPredicted RBP21.8■■□□□ 1.08
HOXA9-203ENST00000465941 NEDD1Q8NHV4 660 aa21.8■■□□□ 1.08
HOXA9-203ENST00000465941 KIAA1683Q9H0B3 1180 aa21.8■■□□□ 1.08
HOXA9-203ENST00000465941 ANO2Q9NQ90 1003 aa21.8■■□□□ 1.08
HOXA9-203ENST00000465941 IGKV6D-41A0A0C4DH26 115 aa21.79■■□□□ 1.08
HOXA9-203ENST00000465941 TSPY3P0CV98 308 aa21.79■■□□□ 1.08
HOXA9-203ENST00000465941 TSPY8P0CW00 308 aa21.79■■□□□ 1.08
HOXA9-203ENST00000465941 HSPA1AP0DMV8 641 aaKnown RBP21.79■■□□□ 1.08
HOXA9-203ENST00000465941 HSPA1BP0DMV9 641 aaKnown RBP21.79■■□□□ 1.08
HOXA9-203ENST00000465941 NT5C2P49902 561 aa21.79■■□□□ 1.08
HOXA9-203ENST00000465941 FAM47AQ5JRC9 791 aa21.79■■□□□ 1.08
HOXA9-203ENST00000465941 GPAT2Q6NUI2 795 aa21.79■■□□□ 1.08
HOXA9-203ENST00000465941 ANKRD23Q86SG2 305 aa21.79■■□□□ 1.08
HOXA9-203ENST00000465941 FAM43AQ8N2R8 423 aa21.79■■□□□ 1.08
HOXA9-203ENST00000465941 ACER1Q8TDN7 264 aa21.79■■□□□ 1.08
HOXA9-203ENST00000465941 RBM8AQ9Y5S9 174 aaKnown RBP21.79■■□□□ 1.08
HOXA9-203ENST00000465941 PLIN4Q96Q06 1357 aa21.78■■□□□ 1.08
HOXA9-203ENST00000465941 A0A1W2PRG0 241 aa21.78■■□□□ 1.08
HOXA9-203ENST00000465941 RANBP6O60518 1105 aaKnown RBP21.78■■□□□ 1.08
HOXA9-203ENST00000465941 TRPA1O75762 1119 aa21.78■■□□□ 1.08
HOXA9-203ENST00000465941 HMGCS2P54868 508 aa21.78■■□□□ 1.08
HOXA9-203ENST00000465941 ICA1Q05084 483 aa21.78■■□□□ 1.08
HOXA9-203ENST00000465941 CFHR5Q9BXR6 569 aa21.78■■□□□ 1.08
HOXA9-203ENST00000465941 ARHGEF10LQ9HCE6 1279 aa21.78■■□□□ 1.08
HOXA9-203ENST00000465941 EMILIN3Q9NT22 766 aa21.78■■□□□ 1.08
HOXA9-203ENST00000465941 TSPY2A6NKD2 308 aa21.77■■□□□ 1.08
HOXA9-203ENST00000465941 CYP21A2P08686 494 aa21.77■■□□□ 1.08
HOXA9-203ENST00000465941 EEF2P13639 858 aaKnown RBP21.77■■□□□ 1.08
HOXA9-203ENST00000465941 USP14P54578 494 aa21.77■■□□□ 1.08
HOXA9-203ENST00000465941 USP17L2Q6R6M4 530 aa21.77■■□□□ 1.08
HOXA9-203ENST00000465941 GADL1Q6ZQY3 521 aa21.77■■□□□ 1.08
HOXA9-203ENST00000465941 C12orf42Q96LP6 360 aa21.77■■□□□ 1.08
HOXA9-203ENST00000465941 FEZ1Q99689 392 aa21.77■■□□□ 1.08
HOXA9-203ENST00000465941 TOMM22Q9NS69 142 aa21.77■■□□□ 1.08
HOXA9-203ENST00000465941 MTMR4Q9NYA4 1195 aa21.77■■□□□ 1.08
HOXA9-203ENST00000465941 TMOD4Q9NZQ9 345 aa21.77■■□□□ 1.08
HOXA9-203ENST00000465941 NYAP2Q9P242 653 aa21.77■■□□□ 1.08
HOXA9-203ENST00000465941 AGTPBP1Q9UPW5 1226 aa21.77■■□□□ 1.08
HOXA9-203ENST00000465941 SLC45A1Q9Y2W3 748 aa21.77■■□□□ 1.08
HOXA9-203ENST00000465941 TMX2Q9Y320 296 aa21.77■■□□□ 1.08
HOXA9-203ENST00000465941 PDHXO00330 501 aa21.76■■□□□ 1.07
HOXA9-203ENST00000465941 NECTIN1Q15223 517 aa21.76■■□□□ 1.07
HOXA9-203ENST00000465941 RRP12Q5JTH9 1297 aaKnown RBP21.76■■□□□ 1.07
HOXA9-203ENST00000465941 CLEC10AQ8IUN9 316 aa21.76■■□□□ 1.07
HOXA9-203ENST00000465941 SH2D4AQ9H788 454 aa21.76■■□□□ 1.07
HOXA9-203ENST00000465941 CNNM2Q9H8M5 875 aa21.76■■□□□ 1.07
HOXA9-203ENST00000465941 PCNTO95613 3336 aa21.75■■□□□ 1.07
HOXA9-203ENST00000465941 MYH8P13535 1937 aa21.75■■□□□ 1.07
HOXA9-203ENST00000465941 PPP4R3BQ5MIZ7 849 aa21.75■■□□□ 1.07
HOXA9-203ENST00000465941 ESR2Q92731 530 aa21.75■■□□□ 1.07
HOXA9-203ENST00000465941 MKL1Q969V6 931 aa21.75■■□□□ 1.07
HOXA9-203ENST00000465941 CEP95Q96GE4 821 aa21.75■■□□□ 1.07
HOXA9-203ENST00000465941 IL17RBQ9NRM6 502 aa21.75■■□□□ 1.07
HOXA9-203ENST00000465941 TCP11L1Q9NUJ3 509 aa21.75■■□□□ 1.07
HOXA9-203ENST00000465941 NEDD4P46934 1319 aa21.75■■□□□ 1.07
HOXA9-203ENST00000465941 FOXN1O15353 648 aa21.74■■□□□ 1.07
HOXA9-203ENST00000465941 REC8O95072 547 aa21.74■■□□□ 1.07
HOXA9-203ENST00000465941 TTLL1O95922 423 aa21.74■■□□□ 1.07
HOXA9-203ENST00000465941 DGKZQ13574 1117 aa21.74■■□□□ 1.07
HOXA9-203ENST00000465941 TREML2Q5T2D2 321 aa21.74■■□□□ 1.07
HOXA9-203ENST00000465941 KRT23Q9C075 422 aa21.74■■□□□ 1.07
HOXA9-203ENST00000465941 SYNPO2Q9UMS6 1093 aa21.74■■□□□ 1.07
HOXA9-203ENST00000465941 GREB1LQ9C091 1923 aaPredicted RBP21.74■■□□□ 1.07
HOXA9-203ENST00000465941 TBC1D8O95759 1140 aa21.73■■□□□ 1.07
HOXA9-203ENST00000465941 HOXA7P31268 230 aaPredicted RBP21.73■■□□□ 1.07
HOXA9-203ENST00000465941 NOVP48745 357 aa21.73■■□□□ 1.07
HOXA9-203ENST00000465941 CTCFP49711 727 aaPredicted RBP21.73■■□□□ 1.07
HOXA9-203ENST00000465941 ATP2B2Q01814 1243 aa21.73■■□□□ 1.07
HOXA9-203ENST00000465941 PABPC4Q13310 644 aaKnown RBP eCLIP21.73■■□□□ 1.07
HOXA9-203ENST00000465941 ZYXQ15942 572 aaKnown RBP21.73■■□□□ 1.07
HOXA9-203ENST00000465941 CLIP2Q9UDT6 1046 aa21.73■■□□□ 1.07
HOXA9-203ENST00000465941 LAMA4Q16363 1823 aa21.73■■□□□ 1.07
HOXA9-203ENST00000465941 B4E1Z4 1266 aa21.72■■□□□ 1.07
HOXA9-203ENST00000465941 E7EWF7 191 aa21.72■■□□□ 1.07
HOXA9-203ENST00000465941 SLC27A2O14975 620 aa21.72■■□□□ 1.07
HOXA9-203ENST00000465941 EPB41L2O43491 1005 aaKnown RBP21.72■■□□□ 1.07
HOXA9-203ENST00000465941 CRHR2Q13324 411 aa21.72■■□□□ 1.07
HOXA9-203ENST00000465941 TAF1CQ15572 869 aaPredicted RBP21.72■■□□□ 1.07
HOXA9-203ENST00000465941 CREB3L3Q68CJ9 461 aa21.72■■□□□ 1.07
HOXA9-203ENST00000465941 NKX2-3Q8TAU0 364 aa21.72■■□□□ 1.07
HOXA9-203ENST00000465941 LPAR1Q92633 364 aa21.72■■□□□ 1.07
HOXA9-203ENST00000465941 VCPKMTQ9H867 229 aa21.72■■□□□ 1.07
HOXA9-203ENST00000465941 ZFYVE28Q9HCC9 887 aa21.72■■□□□ 1.07
HOXA9-203ENST00000465941 ZSWIM5Q9P217 1185 aa21.72■■□□□ 1.07
HOXA9-203ENST00000465941 TAF6LQ9Y6J9 622 aa21.72■■□□□ 1.07
HOXA9-203ENST00000465941 PTPRFP10586 1907 aa21.71■■□□□ 1.07
HOXA9-203ENST00000465941 NMT2O60551 498 aa21.71■■□□□ 1.07
HOXA9-203ENST00000465941 KDM4AO75164 1064 aa21.71■■□□□ 1.07
HOXA9-203ENST00000465941 TRDNQ13061 729 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms