RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 AKAP17AQ02040 695 aaKnown RBP14.56□□□□□ -0.08
ARHGEF3-204ENST00000465659 TRMT44Q8IYL2 757 aaKnown RBP14.56□□□□□ -0.08
ARHGEF3-204ENST00000465659 PDILTQ8N807 584 aa14.56□□□□□ -0.08
ARHGEF3-204ENST00000465659 ZSCAN10Q96SZ4 725 aaPredicted RBP14.56□□□□□ -0.08
ARHGEF3-204ENST00000465659 CDC5LQ99459 802 aaKnown RBP14.56□□□□□ -0.08
ARHGEF3-204ENST00000465659 RBM28Q9NW13 759 aaKnown RBP14.56□□□□□ -0.08
ARHGEF3-204ENST00000465659 SEMA3EO15041 775 aa14.56□□□□□ -0.08
ARHGEF3-204ENST00000465659 CUL4BQ13620 913 aa14.56□□□□□ -0.08
ARHGEF3-204ENST00000465659 PTPN21Q16825 1174 aa14.56□□□□□ -0.08
ARHGEF3-204ENST00000465659 SPATA1Q5VX52 437 aa14.56□□□□□ -0.08
ARHGEF3-204ENST00000465659 ENAHQ8N8S7 591 aaPredicted RBP14.56□□□□□ -0.08
ARHGEF3-204ENST00000465659 RIOK1Q9BRS2 568 aaKnown RBP14.56□□□□□ -0.08
ARHGEF3-204ENST00000465659 A0A087X0B3 334 aa14.55□□□□□ -0.08
ARHGEF3-204ENST00000465659 CALM1P0DP23 149 aa14.55□□□□□ -0.08
ARHGEF3-204ENST00000465659 CALM2P0DP24 149 aa14.55□□□□□ -0.08
ARHGEF3-204ENST00000465659 CALM3P0DP25 149 aa14.55□□□□□ -0.08
ARHGEF3-204ENST00000465659 CASQ1P31415 396 aa14.55□□□□□ -0.08
ARHGEF3-204ENST00000465659 ADKP55263 362 aaKnown RBP14.55□□□□□ -0.08
ARHGEF3-204ENST00000465659 TOGARAM2Q6ZUX3 1019 aa14.55□□□□□ -0.08
ARHGEF3-204ENST00000465659 TNFRSF25Q93038 417 aa14.55□□□□□ -0.08
ARHGEF3-204ENST00000465659 GSDMAQ96QA5 445 aa14.55□□□□□ -0.08
ARHGEF3-204ENST00000465659 BRIP1Q9BX63 1249 aa14.55□□□□□ -0.08
ARHGEF3-204ENST00000465659 ATP8B1O43520 1251 aa14.55□□□□□ -0.08
ARHGEF3-204ENST00000465659 PBX1P40424 430 aa14.55□□□□□ -0.08
ARHGEF3-204ENST00000465659 HSP90AA4PQ58FG1 418 aa14.55□□□□□ -0.08
ARHGEF3-204ENST00000465659 CDKAL1Q5VV42 579 aa14.55□□□□□ -0.08
ARHGEF3-204ENST00000465659 KIFC2Q96AC6 838 aa14.55□□□□□ -0.08
ARHGEF3-204ENST00000465659 PAGE5Q96GU1 130 aa14.55□□□□□ -0.08
ARHGEF3-204ENST00000465659 WDR24Q96S15 920 aa14.55□□□□□ -0.08
ARHGEF3-204ENST00000465659 CARD6Q9BX69 1037 aa14.55□□□□□ -0.08
ARHGEF3-204ENST00000465659 NAA15Q9BXJ9 866 aaKnown RBP14.55□□□□□ -0.08
ARHGEF3-204ENST00000465659 MINDY4BA8MYZ0 360 aa14.54□□□□□ -0.08
ARHGEF3-204ENST00000465659 PNMA6AP0CW24 399 aaPredicted RBP14.54□□□□□ -0.08
ARHGEF3-204ENST00000465659 CRKLP46109 303 aaKnown RBP14.54□□□□□ -0.08
ARHGEF3-204ENST00000465659 DPYDQ12882 1025 aa14.54□□□□□ -0.08
ARHGEF3-204ENST00000465659 CATIPQ7Z7H3 387 aa14.54□□□□□ -0.08
ARHGEF3-204ENST00000465659 SDR42E1Q8WUS8 393 aa14.54□□□□□ -0.08
ARHGEF3-204ENST00000465659 GNL3LQ9NVN8 582 aaKnown RBP14.54□□□□□ -0.08
ARHGEF3-204ENST00000465659 VPS54Q9P1Q0 977 aa14.54□□□□□ -0.08
ARHGEF3-204ENST00000465659 MRFAP1Q9Y605 127 aa14.54□□□□□ -0.08
ARHGEF3-204ENST00000465659 FAM205CA6NFA0 338 aa14.54□□□□□ -0.08
ARHGEF3-204ENST00000465659 AKR1B15C9JRZ8 316 aaPredicted RBP14.54□□□□□ -0.08
ARHGEF3-204ENST00000465659 GNG11P61952 73 aa14.54□□□□□ -0.08
ARHGEF3-204ENST00000465659 TROAPQ12815 778 aa14.54□□□□□ -0.08
ARHGEF3-204ENST00000465659 ZNF771Q7L3S4 317 aaPredicted RBP14.54□□□□□ -0.08
ARHGEF3-204ENST00000465659 DHX58Q96C10 678 aa14.54□□□□□ -0.08
ARHGEF3-204ENST00000465659 EPSTI1Q96J88 318 aa14.54□□□□□ -0.08
ARHGEF3-204ENST00000465659 ZNF335Q9H4Z2 1342 aaPredicted RBP14.53□□□□□ -0.08
ARHGEF3-204ENST00000465659 DDAH1O94760 285 aa14.53□□□□□ -0.08
ARHGEF3-204ENST00000465659 ATP2B1P20020 1258 aa14.53□□□□□ -0.08
ARHGEF3-204ENST00000465659 NPY5RQ15761 445 aa14.53□□□□□ -0.08
ARHGEF3-204ENST00000465659 EARS2Q5JPH6 523 aaKnown RBP14.53□□□□□ -0.08
ARHGEF3-204ENST00000465659 SYMPKQ92797 1274 aaKnown RBP14.53□□□□□ -0.08
ARHGEF3-204ENST00000465659 CTAGE1Q96RT6 745 aa14.53□□□□□ -0.08
ARHGEF3-204ENST00000465659 ADD3Q9UEY8 706 aaKnown RBP14.53□□□□□ -0.08
ARHGEF3-204ENST00000465659 COL1A1P02452 1464 aaPredicted RBP14.53□□□□□ -0.08
ARHGEF3-204ENST00000465659 BAZ2AQ9UIF9 1905 aaKnown RBP14.53□□□□□ -0.08
ARHGEF3-204ENST00000465659 COL4A1P02462 1669 aa14.53□□□□□ -0.08
ARHGEF3-204ENST00000465659 SCN7AQ01118 1682 aa14.53□□□□□ -0.08
ARHGEF3-204ENST00000465659 SYNRGQ9UMZ2 1314 aa14.53□□□□□ -0.08
ARHGEF3-204ENST00000465659 MYH14Q7Z406 1995 aaKnown RBP14.53□□□□□ -0.08
ARHGEF3-204ENST00000465659 IGSF3O75054 1194 aa14.53□□□□□ -0.08
ARHGEF3-204ENST00000465659 UBE4AQ14139 1066 aa14.53□□□□□ -0.08
ARHGEF3-204ENST00000465659 IFIT1BQ5T764 474 aaKnown RBP14.53□□□□□ -0.08
ARHGEF3-204ENST00000465659 TMCO3Q6UWJ1 677 aa14.53□□□□□ -0.08
ARHGEF3-204ENST00000465659 RSRC2Q7L4I2 434 aaKnown RBP14.53□□□□□ -0.08
ARHGEF3-204ENST00000465659 BRMS1Q9HCU9 246 aa14.53□□□□□ -0.08
ARHGEF3-204ENST00000465659 CD44P16070 742 aaKnown RBP14.52□□□□□ -0.08
ARHGEF3-204ENST00000465659 TMTC3Q6ZXV5 915 aa14.52□□□□□ -0.08
ARHGEF3-204ENST00000465659 IQCA1Q86XH1 822 aa14.52□□□□□ -0.08
ARHGEF3-204ENST00000465659 GPR161Q8N6U8 529 aaKnown RBP14.52□□□□□ -0.08
ARHGEF3-204ENST00000465659 NIP7Q9Y221 180 aaKnown RBP eCLIP14.52□□□□□ -0.08
ARHGEF3-204ENST00000465659 V9GY48 417 aaPredicted RBP14.52□□□□□ -0.08
ARHGEF3-204ENST00000465659 PPP1R3GB7ZBB8 358 aa14.52□□□□□ -0.09
ARHGEF3-204ENST00000465659 CCDC175P0C221 793 aa14.52□□□□□ -0.09
ARHGEF3-204ENST00000465659 FECHP22830 423 aa14.52□□□□□ -0.09
ARHGEF3-204ENST00000465659 ATP2C1P98194 919 aaPredicted RBP14.52□□□□□ -0.09
ARHGEF3-204ENST00000465659 COL16A1Q07092 1604 aaPredicted RBP14.52□□□□□ -0.09
ARHGEF3-204ENST00000465659 TEX33O43247 280 aa14.51□□□□□ -0.09
ARHGEF3-204ENST00000465659 PLEKHA8P1O95397 391 aa14.51□□□□□ -0.09
ARHGEF3-204ENST00000465659 PYM1Q9BRP8 204 aaKnown RBP14.51□□□□□ -0.09
ARHGEF3-204ENST00000465659 CDCA7Q9BWT1 371 aaPredicted RBP14.51□□□□□ -0.09
ARHGEF3-204ENST00000465659 ABCF2Q9UG63 623 aa14.51□□□□□ -0.09
ARHGEF3-204ENST00000465659 ITIH6Q6UXX5 1313 aa14.51□□□□□ -0.09
ARHGEF3-204ENST00000465659 AFMP43652 599 aa14.51□□□□□ -0.09
ARHGEF3-204ENST00000465659 PLA2G4AP47712 749 aa14.51□□□□□ -0.09
ARHGEF3-204ENST00000465659 TRAPPC10P48553 1259 aa14.51□□□□□ -0.09
ARHGEF3-204ENST00000465659 PPP2R3AQ06190 1150 aa14.51□□□□□ -0.09
ARHGEF3-204ENST00000465659 TTC38Q5R3I4 469 aa14.51□□□□□ -0.09
ARHGEF3-204ENST00000465659 IGSF22Q8N9C0 903 aa14.51□□□□□ -0.09
ARHGEF3-204ENST00000465659 CCDC51Q96ER9 411 aa14.51□□□□□ -0.09
ARHGEF3-204ENST00000465659 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.51□□□□□ -0.09
ARHGEF3-204ENST00000465659 SMIM22K7EJ46 135 aa14.5□□□□□ -0.09
ARHGEF3-204ENST00000465659 WNT7AO00755 349 aa14.5□□□□□ -0.09
ARHGEF3-204ENST00000465659 ORC4O43929 436 aa14.5□□□□□ -0.09
ARHGEF3-204ENST00000465659 ATP6V1AP38606 617 aa14.5□□□□□ -0.09
ARHGEF3-204ENST00000465659 E2F4Q16254 413 aa14.5□□□□□ -0.09
ARHGEF3-204ENST00000465659 PPFIBP1Q86W92 1011 aa14.5□□□□□ -0.09
ARHGEF3-204ENST00000465659 RABGGTAQ92696 567 aa14.5□□□□□ -0.09
ARHGEF3-204ENST00000465659 ADGRG1Q9Y653 693 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms