RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 UHRF1Q96T88 793 aaPredicted RBP7.43□□□□□ -1.22
SMARCC1-204ENST00000462198 PARK7Q99497 189 aaKnown RBP7.43□□□□□ -1.22
SMARCC1-204ENST00000462198 LRFN3Q9BTN0 628 aa7.43□□□□□ -1.22
SMARCC1-204ENST00000462198 ANKRD2Q9GZV1 360 aa7.43□□□□□ -1.22
SMARCC1-204ENST00000462198 PHAXQ9H814 394 aaKnown RBP7.43□□□□□ -1.22
SMARCC1-204ENST00000462198 PRM3Q9NNZ6 103 aa7.43□□□□□ -1.22
SMARCC1-204ENST00000462198 SMC4Q9NTJ3 1288 aa7.43□□□□□ -1.22
SMARCC1-204ENST00000462198 DNAH12Q6ZR08 3092 aa7.42□□□□□ -1.22
SMARCC1-204ENST00000462198 COL6A1P12109 1028 aa7.42□□□□□ -1.22
SMARCC1-204ENST00000462198 KCNJ4P48050 445 aa7.42□□□□□ -1.22
SMARCC1-204ENST00000462198 SMAD3P84022 425 aaKnown RBP7.42□□□□□ -1.22
SMARCC1-204ENST00000462198 TRIM32Q13049 653 aa7.42□□□□□ -1.22
SMARCC1-204ENST00000462198 FKBP5Q13451 457 aaPredicted RBP7.42□□□□□ -1.22
SMARCC1-204ENST00000462198 AAMPQ13685 434 aa7.42□□□□□ -1.22
SMARCC1-204ENST00000462198 ALDH1L2Q3SY69 923 aa7.42□□□□□ -1.22
SMARCC1-204ENST00000462198 LCE2AQ5TA79 106 aaPredicted RBP7.42□□□□□ -1.22
SMARCC1-204ENST00000462198 GPAT2Q6NUI2 795 aa7.42□□□□□ -1.22
SMARCC1-204ENST00000462198 G2E3Q7L622 706 aa7.42□□□□□ -1.22
SMARCC1-204ENST00000462198 DZIP1LQ8IYY4 767 aaKnown RBP7.42□□□□□ -1.22
SMARCC1-204ENST00000462198 CCDC191Q8NCU4 936 aa7.42□□□□□ -1.22
SMARCC1-204ENST00000462198 TTLL11Q8NHH1 800 aa7.42□□□□□ -1.22
SMARCC1-204ENST00000462198 PPM1EQ8WY54 764 aa7.42□□□□□ -1.22
SMARCC1-204ENST00000462198 SSH1Q8WYL5 1049 aa7.42□□□□□ -1.22
SMARCC1-204ENST00000462198 KCNH4Q9UQ05 1017 aa7.42□□□□□ -1.22
SMARCC1-204ENST00000462198 JAG2Q9Y219 1238 aa7.42□□□□□ -1.22
SMARCC1-204ENST00000462198 MYH3P11055 1940 aa7.42□□□□□ -1.22
SMARCC1-204ENST00000462198 CACNA1AO00555 2505 aa7.42□□□□□ -1.22
SMARCC1-204ENST00000462198 TRIM6-TRIM34B2RNG4 842 aa7.41□□□□□ -1.22
SMARCC1-204ENST00000462198 SNAP23O00161 211 aa7.41□□□□□ -1.22
SMARCC1-204ENST00000462198 HMGCRP04035 888 aa7.41□□□□□ -1.22
SMARCC1-204ENST00000462198 IL1R1P14778 569 aa7.41□□□□□ -1.22
SMARCC1-204ENST00000462198 INPP5BP32019 993 aa7.41□□□□□ -1.22
SMARCC1-204ENST00000462198 IGHMBP2P38935 993 aaKnown RBP7.41□□□□□ -1.22
SMARCC1-204ENST00000462198 CTSWP56202 376 aa7.41□□□□□ -1.22
SMARCC1-204ENST00000462198 MRPS5P82675 430 aaKnown RBP7.41□□□□□ -1.22
SMARCC1-204ENST00000462198 GRIN2CQ14957 1233 aa7.41□□□□□ -1.22
SMARCC1-204ENST00000462198 QPCTQ16769 361 aa7.41□□□□□ -1.22
SMARCC1-204ENST00000462198 C9orf50Q5SZB4 431 aa7.41□□□□□ -1.22
SMARCC1-204ENST00000462198 C6orf132Q5T0Z8 1188 aa7.41□□□□□ -1.22
SMARCC1-204ENST00000462198 KSR2Q6VAB6 950 aa7.41□□□□□ -1.22
SMARCC1-204ENST00000462198 MIGA2Q7L4E1 593 aa7.41□□□□□ -1.22
SMARCC1-204ENST00000462198 MYD88Q99836 296 aa7.41□□□□□ -1.22
SMARCC1-204ENST00000462198 GREM2Q9H772 168 aa7.41□□□□□ -1.22
SMARCC1-204ENST00000462198 TTF2Q9UNY4 1162 aaKnown RBP7.41□□□□□ -1.22
SMARCC1-204ENST00000462198 MAP3K2Q9Y2U5 619 aa7.41□□□□□ -1.22
SMARCC1-204ENST00000462198 PI4KAP2A4QPH2 592 aa7.4□□□□□ -1.22
SMARCC1-204ENST00000462198 CXCL11O14625 94 aa7.4□□□□□ -1.22
SMARCC1-204ENST00000462198 GPR37L1O60883 481 aa7.4□□□□□ -1.22
SMARCC1-204ENST00000462198 RBM25P49756 843 aaKnown RBP7.4□□□□□ -1.22
SMARCC1-204ENST00000462198 RARSP54136 660 aaKnown RBP7.4□□□□□ -1.22
SMARCC1-204ENST00000462198 NEXNQ0ZGT2 675 aa7.4□□□□□ -1.22
SMARCC1-204ENST00000462198 PDE3AQ14432 1141 aa7.4□□□□□ -1.22
SMARCC1-204ENST00000462198 PI4KAP1Q8N8J0 262 aa7.4□□□□□ -1.22
SMARCC1-204ENST00000462198 HOOK2Q96ED9 719 aa7.4□□□□□ -1.22
SMARCC1-204ENST00000462198 ZNF341Q9BYN7 854 aa7.4□□□□□ -1.22
SMARCC1-204ENST00000462198 EPHX3Q9H6B9 360 aa7.4□□□□□ -1.22
SMARCC1-204ENST00000462198 IL21Q9HBE4 155 aa7.4□□□□□ -1.22
SMARCC1-204ENST00000462198 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.4□□□□□ -1.22
SMARCC1-204ENST00000462198 CWC25Q9NXE8 425 aaPredicted RBP7.4□□□□□ -1.22
SMARCC1-204ENST00000462198 THEGQ9P2T0 379 aa7.4□□□□□ -1.22
SMARCC1-204ENST00000462198 PRKAG2Q9UGJ0 569 aa7.4□□□□□ -1.22
SMARCC1-204ENST00000462198 ARAP2Q8WZ64 1704 aa7.4□□□□□ -1.23
SMARCC1-204ENST00000462198 AK9Q5TCS8 1911 aa7.4□□□□□ -1.23
SMARCC1-204ENST00000462198 CDH23Q9H251 3354 aa7.4□□□□□ -1.23
SMARCC1-204ENST00000462198 PTPRCP08575 1304 aa7.39□□□□□ -1.23
SMARCC1-204ENST00000462198 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.39□□□□□ -1.23
SMARCC1-204ENST00000462198 MOXD2PA6NHM9 499 aa7.39□□□□□ -1.23
SMARCC1-204ENST00000462198 TAF5LO75529 589 aa7.39□□□□□ -1.23
SMARCC1-204ENST00000462198 CRKP46108 304 aa7.39□□□□□ -1.23
SMARCC1-204ENST00000462198 CACNB3P54284 484 aa7.39□□□□□ -1.23
SMARCC1-204ENST00000462198 CHRNDQ07001 517 aa7.39□□□□□ -1.23
SMARCC1-204ENST00000462198 DCAF15Q66K64 600 aa7.39□□□□□ -1.23
SMARCC1-204ENST00000462198 C15orf52Q6ZUT6 534 aaKnown RBP7.39□□□□□ -1.23
SMARCC1-204ENST00000462198 FASTKD5Q7L8L6 764 aaKnown RBP7.39□□□□□ -1.23
SMARCC1-204ENST00000462198 ZNF804AQ7Z570 1209 aa7.39□□□□□ -1.23
SMARCC1-204ENST00000462198 ANKRD13CQ8N6S4 541 aa7.39□□□□□ -1.23
SMARCC1-204ENST00000462198 DNAAF4Q8WXU2 420 aa7.39□□□□□ -1.23
SMARCC1-204ENST00000462198 NECAB3Q96P71 396 aaPredicted RBP7.39□□□□□ -1.23
SMARCC1-204ENST00000462198 MPHOSPH8Q99549 860 aa7.39□□□□□ -1.23
SMARCC1-204ENST00000462198 P2RX7Q99572 595 aaKnown RBP7.39□□□□□ -1.23
SMARCC1-204ENST00000462198 MTRQ99707 1265 aa7.39□□□□□ -1.23
SMARCC1-204ENST00000462198 METTL22Q9BUU2 404 aaPredicted RBP7.39□□□□□ -1.23
SMARCC1-204ENST00000462198 SENP6Q9GZR1 1112 aaPredicted RBP7.39□□□□□ -1.23
SMARCC1-204ENST00000462198 GJD2Q9UKL4 321 aa7.39□□□□□ -1.23
SMARCC1-204ENST00000462198 KIF16BQ96L93 1317 aa7.38□□□□□ -1.23
SMARCC1-204ENST00000462198 F6X3S4 739 aa7.38□□□□□ -1.23
SMARCC1-204ENST00000462198 IPO8O15397 1037 aaKnown RBP7.38□□□□□ -1.23
SMARCC1-204ENST00000462198 BCAR3O75815 825 aa7.38□□□□□ -1.23
SMARCC1-204ENST00000462198 AP1G2O75843 785 aa7.38□□□□□ -1.23
SMARCC1-204ENST00000462198 PRSS12P56730 875 aa7.38□□□□□ -1.23
SMARCC1-204ENST00000462198 MFSD14BQ5SR56 506 aa7.38□□□□□ -1.23
SMARCC1-204ENST00000462198 SLC4A10Q6U841 1118 aa7.38□□□□□ -1.23
SMARCC1-204ENST00000462198 TREML4Q6UXN2 200 aa7.38□□□□□ -1.23
SMARCC1-204ENST00000462198 SMCR8Q8TEV9 937 aaPredicted RBP7.38□□□□□ -1.23
SMARCC1-204ENST00000462198 FRAT1Q92837 279 aaPredicted RBP7.38□□□□□ -1.23
SMARCC1-204ENST00000462198 ZNF112Q9UJU3 913 aa7.38□□□□□ -1.23
SMARCC1-204ENST00000462198 RCAN3Q9UKA8 241 aa7.38□□□□□ -1.23
SMARCC1-204ENST00000462198 NOB1Q9ULX3 412 aaKnown RBP7.38□□□□□ -1.23
SMARCC1-204ENST00000462198 RCCD1A6NED2 376 aa7.37□□□□□ -1.23
SMARCC1-204ENST00000462198 RRP9O43818 475 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms