RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 MYL10Q9BUA6 226 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 RBSNQ9H1K0 784 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 TOMM22Q9NS69 142 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 DAGLAQ9Y4D2 1042 aa12.62□□□□□ -0.39
IFT88-204ENST00000461115 PLIN4Q96Q06 1357 aa12.61□□□□□ -0.39
IFT88-204ENST00000461115 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.61□□□□□ -0.39
IFT88-204ENST00000461115 POTEMA6NI47 508 aa12.61□□□□□ -0.39
IFT88-204ENST00000461115 KIF28PB7ZC32 967 aa12.61□□□□□ -0.39
IFT88-204ENST00000461115 USP5P45974 858 aa12.61□□□□□ -0.39
IFT88-204ENST00000461115 GTF2IP78347 998 aa12.61□□□□□ -0.39
IFT88-204ENST00000461115 CATIPQ7Z7H3 387 aa12.61□□□□□ -0.39
IFT88-204ENST00000461115 RAB11FIP4Q86YS3 637 aa12.61□□□□□ -0.39
IFT88-204ENST00000461115 AMOTL1Q8IY63 956 aa12.61□□□□□ -0.39
IFT88-204ENST00000461115 TRIM22Q8IYM9 498 aa12.61□□□□□ -0.39
IFT88-204ENST00000461115 EFCAB3Q8N7B9 438 aa12.61□□□□□ -0.39
IFT88-204ENST00000461115 ENGASEQ8NFI3 743 aa12.61□□□□□ -0.39
IFT88-204ENST00000461115 PHKBQ93100 1093 aa12.61□□□□□ -0.39
IFT88-204ENST00000461115 ZFP91Q96JP5 570 aaPredicted RBP12.61□□□□□ -0.39
IFT88-204ENST00000461115 AIFM3Q96NN9 605 aa12.61□□□□□ -0.39
IFT88-204ENST00000461115 TSPY26PQ9H489 355 aa12.61□□□□□ -0.39
IFT88-204ENST00000461115 ZNF287Q9HBT7 754 aa12.61□□□□□ -0.39
IFT88-204ENST00000461115 FLT1P17948 1338 aa12.6□□□□□ -0.39
IFT88-204ENST00000461115 MYO3BQ8WXR4 1341 aa12.6□□□□□ -0.39
IFT88-204ENST00000461115 FAM237AA0A1B0GTK4 181 aa12.6□□□□□ -0.39
IFT88-204ENST00000461115 PRDM1O75626 825 aa12.6□□□□□ -0.39
IFT88-204ENST00000461115 MMP1P03956 469 aa12.6□□□□□ -0.39
IFT88-204ENST00000461115 LIG1P18858 919 aa12.6□□□□□ -0.39
IFT88-204ENST00000461115 GUCY1B3Q02153 619 aa12.6□□□□□ -0.39
IFT88-204ENST00000461115 STRIP1Q5VSL9 837 aa12.6□□□□□ -0.39
IFT88-204ENST00000461115 ADALQ6DHV7 355 aa12.6□□□□□ -0.39
IFT88-204ENST00000461115 OTUD7BQ6GQQ9 843 aa12.6□□□□□ -0.39
IFT88-204ENST00000461115 TMTC3Q6ZXV5 915 aa12.6□□□□□ -0.39
IFT88-204ENST00000461115 TEX11Q8IYF3 940 aa12.6□□□□□ -0.39
IFT88-204ENST00000461115 FAM177A1Q8N128 213 aaPredicted RBP12.6□□□□□ -0.39
IFT88-204ENST00000461115 KCNG4Q8TDN1 519 aa12.6□□□□□ -0.39
IFT88-204ENST00000461115 TGFBRAP1Q8WUH2 860 aa12.6□□□□□ -0.39
IFT88-204ENST00000461115 PDLIM2Q96JY6 352 aa12.6□□□□□ -0.39
IFT88-204ENST00000461115 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.6□□□□□ -0.39
IFT88-204ENST00000461115 PANK2Q9BZ23 570 aa12.6□□□□□ -0.39
IFT88-204ENST00000461115 TMX4Q9H1E5 349 aaPredicted RBP12.6□□□□□ -0.39
IFT88-204ENST00000461115 FOXP1Q9H334 677 aaPredicted RBP12.6□□□□□ -0.39
IFT88-204ENST00000461115 CLSTN2Q9H4D0 955 aa12.6□□□□□ -0.39
IFT88-204ENST00000461115 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.6□□□□□ -0.39
IFT88-204ENST00000461115 IL17RBQ9NRM6 502 aa12.6□□□□□ -0.39
IFT88-204ENST00000461115 RASA1P20936 1047 aa12.59□□□□□ -0.39
IFT88-204ENST00000461115 BAG6P46379 1132 aa12.59□□□□□ -0.39
IFT88-204ENST00000461115 PLCD1P51178 756 aa12.59□□□□□ -0.39
IFT88-204ENST00000461115 GABPAQ06546 454 aa12.59□□□□□ -0.39
IFT88-204ENST00000461115 SLC39A14Q15043 492 aa12.59□□□□□ -0.39
IFT88-204ENST00000461115 PKN1Q16512 942 aa12.59□□□□□ -0.39
IFT88-204ENST00000461115 UVSSAQ2YD98 709 aa12.59□□□□□ -0.39
IFT88-204ENST00000461115 MSL1Q68DK7 614 aa12.59□□□□□ -0.39
IFT88-204ENST00000461115 OLFM4Q6UX06 510 aa12.59□□□□□ -0.39
IFT88-204ENST00000461115 RNF25Q96BH1 459 aaPredicted RBP12.59□□□□□ -0.39
IFT88-204ENST00000461115 SLC26A6Q9BXS9 759 aa12.59□□□□□ -0.39
IFT88-204ENST00000461115 GJB4Q9NTQ9 266 aa12.59□□□□□ -0.39
IFT88-204ENST00000461115 SIPA1L1O43166 1804 aa12.58□□□□□ -0.4
IFT88-204ENST00000461115 GOLGA6L4A6NEF3 574 aa12.58□□□□□ -0.4
IFT88-204ENST00000461115 SNPHO15079 494 aa12.58□□□□□ -0.4
IFT88-204ENST00000461115 PPP6R2O75170 966 aa12.58□□□□□ -0.4
IFT88-204ENST00000461115 WDHD1O75717 1129 aaPredicted RBP12.58□□□□□ -0.4
IFT88-204ENST00000461115 GUCY1A2P33402 732 aa12.58□□□□□ -0.4
IFT88-204ENST00000461115 SNW1Q13573 536 aaKnown RBP12.58□□□□□ -0.4
IFT88-204ENST00000461115 PTPAQ15257 358 aa12.58□□□□□ -0.4
IFT88-204ENST00000461115 ANO1Q5XXA6 986 aa12.58□□□□□ -0.4
IFT88-204ENST00000461115 POTEGQ6S5H5 508 aa12.58□□□□□ -0.4
IFT88-204ENST00000461115 CCDC144CPQ8IYA2 1237 aa12.58□□□□□ -0.4
IFT88-204ENST00000461115 NEDD1Q8NHV4 660 aa12.58□□□□□ -0.4
IFT88-204ENST00000461115 NUP62CLQ9H1M0 184 aa12.58□□□□□ -0.4
IFT88-204ENST00000461115 DACT1Q9NYF0 836 aa12.58□□□□□ -0.4
IFT88-204ENST00000461115 PCDHA7Q9UN72 937 aa12.58□□□□□ -0.4
IFT88-204ENST00000461115 CNTNAP5Q8WYK1 1306 aa12.58□□□□□ -0.4
IFT88-204ENST00000461115 ADAMTSL1Q8N6G6 1762 aa12.58□□□□□ -0.4
IFT88-204ENST00000461115 BAZ2BQ9UIF8 2168 aaKnown RBP12.58□□□□□ -0.4
IFT88-204ENST00000461115 BRCA1P38398 1863 aaKnown RBP12.58□□□□□ -0.4
IFT88-204ENST00000461115 TSPY2A6NKD2 308 aa12.57□□□□□ -0.4
IFT88-204ENST00000461115 RIMBP2O15034 1052 aa12.57□□□□□ -0.4
IFT88-204ENST00000461115 CTAGE5O15320 804 aa12.57□□□□□ -0.4
IFT88-204ENST00000461115 PPFIA3O75145 1194 aa12.57□□□□□ -0.4
IFT88-204ENST00000461115 SMARCA1P28370 1054 aa12.57□□□□□ -0.4
IFT88-204ENST00000461115 CDK8P49336 464 aa12.57□□□□□ -0.4
IFT88-204ENST00000461115 TFAP4Q01664 338 aa12.57□□□□□ -0.4
IFT88-204ENST00000461115 KIAA2012Q0VF49 1180 aa12.57□□□□□ -0.4
IFT88-204ENST00000461115 CCDC173Q0VFZ6 552 aa12.57□□□□□ -0.4
IFT88-204ENST00000461115 TRIM29Q14134 588 aa12.57□□□□□ -0.4
IFT88-204ENST00000461115 FAM47AQ5JRC9 791 aa12.57□□□□□ -0.4
IFT88-204ENST00000461115 DACT2Q5SW24 774 aa12.57□□□□□ -0.4
IFT88-204ENST00000461115 AXDND1Q5T1B0 1012 aaPredicted RBP12.57□□□□□ -0.4
IFT88-204ENST00000461115 NOSTRINQ8IVI9 506 aa12.57□□□□□ -0.4
IFT88-204ENST00000461115 MAPKAPK5Q8IW41 473 aa12.57□□□□□ -0.4
IFT88-204ENST00000461115 SUPT20HQ8NEM7 779 aa12.57□□□□□ -0.4
IFT88-204ENST00000461115 ZNF622Q969S3 477 aaKnown RBP eCLIP12.57□□□□□ -0.4
IFT88-204ENST00000461115 ZDHHC15Q96MV8 337 aa12.57□□□□□ -0.4
IFT88-204ENST00000461115 PHF20Q9BVI0 1012 aa12.57□□□□□ -0.4
IFT88-204ENST00000461115 FTOQ9C0B1 505 aaKnown RBP eCLIP12.57□□□□□ -0.4
IFT88-204ENST00000461115 UBE2Q2LH0YL09 131 aa12.56□□□□□ -0.4
IFT88-204ENST00000461115 SPTLC2O15270 562 aa12.56□□□□□ -0.4
IFT88-204ENST00000461115 NR1I2O75469 434 aa12.56□□□□□ -0.4
IFT88-204ENST00000461115 POLR3DP05423 398 aaPredicted RBP12.56□□□□□ -0.4
IFT88-204ENST00000461115 KIF5BP33176 963 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms