RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-205ENST00000459990 USP17L2Q6R6M4 530 aa11.96□□□□□ -0.49
SYN3-205ENST00000459990 NECAB2Q7Z6G3 386 aa11.96□□□□□ -0.49
SYN3-205ENST00000459990 C7orf61Q8IZ16 206 aa11.96□□□□□ -0.49
SYN3-205ENST00000459990 SOCS4Q8WXH5 440 aa11.96□□□□□ -0.49
SYN3-205ENST00000459990 EDC3Q96F86 508 aaKnown RBP11.96□□□□□ -0.49
SYN3-205ENST00000459990 LRCH3Q96II8 777 aa11.96□□□□□ -0.49
SYN3-205ENST00000459990 TRIM34Q9BYJ4 488 aa11.96□□□□□ -0.49
SYN3-205ENST00000459990 HMX1Q9NP08 348 aaPredicted RBP11.96□□□□□ -0.49
SYN3-205ENST00000459990 GINM1Q9NU53 330 aa11.96□□□□□ -0.49
SYN3-205ENST00000459990 STAP2Q9UGK3 403 aa11.96□□□□□ -0.49
SYN3-205ENST00000459990 SERPINB13Q9UIV8 391 aa11.96□□□□□ -0.49
SYN3-205ENST00000459990 OGDHLQ9ULD0 1010 aa11.96□□□□□ -0.49
SYN3-205ENST00000459990 NR2E3Q9Y5X4 410 aa11.96□□□□□ -0.49
SYN3-205ENST00000459990 ZBED9Q6R2W3 1325 aa11.95□□□□□ -0.5
SYN3-205ENST00000459990 TCRBV5S4A2TA0A5A2 114 aa11.95□□□□□ -0.5
SYN3-205ENST00000459990 SMIM22K7EJ46 135 aa11.95□□□□□ -0.5
SYN3-205ENST00000459990 XRCC5P13010 732 aaKnown RBP11.95□□□□□ -0.5
SYN3-205ENST00000459990 PDE6AP16499 860 aa11.95□□□□□ -0.5
SYN3-205ENST00000459990 ANKLE1Q8NAG6 615 aa11.95□□□□□ -0.5
SYN3-205ENST00000459990 SLC44A5Q8NCS7 719 aa11.95□□□□□ -0.5
SYN3-205ENST00000459990 RHPN1Q8TCX5 695 aa11.95□□□□□ -0.5
SYN3-205ENST00000459990 FEZ1Q99689 392 aa11.95□□□□□ -0.5
SYN3-205ENST00000459990 GDF15Q99988 308 aa11.95□□□□□ -0.5
SYN3-205ENST00000459990 NUDT12Q9BQG2 462 aa11.95□□□□□ -0.5
SYN3-205ENST00000459990 FLRT1Q9NZU1 646 aa11.95□□□□□ -0.5
SYN3-205ENST00000459990 BTBD7Q9P203 1132 aa11.95□□□□□ -0.5
SYN3-205ENST00000459990 ZMYND8Q9ULU4 1186 aaPredicted RBP11.95□□□□□ -0.5
SYN3-205ENST00000459990 PLXNA1Q9UIW2 1896 aa11.94□□□□□ -0.5
SYN3-205ENST00000459990 A0A1W2PRG0 241 aa11.94□□□□□ -0.5
SYN3-205ENST00000459990 SPDYE16A6NNV3 312 aaPredicted RBP11.94□□□□□ -0.5
SYN3-205ENST00000459990 CYP2D6P10635 497 aa11.94□□□□□ -0.5
SYN3-205ENST00000459990 COL6A1P12109 1028 aa11.94□□□□□ -0.5
SYN3-205ENST00000459990 ZKSCAN1P17029 563 aaPredicted RBP11.94□□□□□ -0.5
SYN3-205ENST00000459990 SYN1P17600 705 aa11.94□□□□□ -0.5
SYN3-205ENST00000459990 MAPK4P31152 587 aa11.94□□□□□ -0.5
SYN3-205ENST00000459990 MAP3K12Q12852 859 aa11.94□□□□□ -0.5
SYN3-205ENST00000459990 RAB3GAP1Q15042 981 aa11.94□□□□□ -0.5
SYN3-205ENST00000459990 CERKLQ49MI3 558 aaPredicted RBP11.94□□□□□ -0.5
SYN3-205ENST00000459990 KIAA1755Q5JYT7 1200 aa11.94□□□□□ -0.5
SYN3-205ENST00000459990 LHX8Q68G74 356 aa11.94□□□□□ -0.5
SYN3-205ENST00000459990 CLEC10AQ8IUN9 316 aa11.94□□□□□ -0.5
SYN3-205ENST00000459990 LCORLQ8N3X6 602 aa11.94□□□□□ -0.5
SYN3-205ENST00000459990 SDR42E1Q8WUS8 393 aa11.94□□□□□ -0.5
SYN3-205ENST00000459990 APBA2Q99767 749 aa11.94□□□□□ -0.5
SYN3-205ENST00000459990 KIAA1683Q9H0B3 1180 aa11.94□□□□□ -0.5
SYN3-205ENST00000459990 C11orf49Q9H6J7 331 aa11.94□□□□□ -0.5
SYN3-205ENST00000459990 ZNFX1Q9P2E3 1918 aaKnown RBP11.94□□□□□ -0.5
SYN3-205ENST00000459990 ZNF532Q9HCE3 1301 aa11.93□□□□□ -0.5
SYN3-205ENST00000459990 APBB1O00213 710 aa11.93□□□□□ -0.5
SYN3-205ENST00000459990 SEPT2Q15019 361 aa11.93□□□□□ -0.5
SYN3-205ENST00000459990 ABCB5Q2M3G0 1257 aa11.93□□□□□ -0.5
SYN3-205ENST00000459990 CATSPERGQ6ZRH7 1159 aa11.93□□□□□ -0.5
SYN3-205ENST00000459990 PLEKHH3Q7Z736 793 aa11.93□□□□□ -0.5
SYN3-205ENST00000459990 ERC1Q8IUD2 1116 aa11.93□□□□□ -0.5
SYN3-205ENST00000459990 NPLOC4Q8TAT6 608 aa11.93□□□□□ -0.5
SYN3-205ENST00000459990 NBPF3Q9H094 633 aa11.93□□□□□ -0.5
SYN3-205ENST00000459990 RPAP3Q9H6T3 665 aaPredicted RBP11.93□□□□□ -0.5
SYN3-205ENST00000459990 EYSQ5T1H1 3165 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 MAGEB6P1A0A0J9YX57 407 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 A0A1W2PPC1 479 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 USP17L15C9J2P7 530 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 USP17L13C9JLJ4 530 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 USP17L11C9JVI0 530 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 USP17L18D6R9N7 530 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 USP17L22D6RA61 530 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 USP17L17D6RBQ6 530 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 USP17L19D6RCP7 530 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 USP17L20D6RJB6 530 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 GOLIM4O00461 696 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 IGHA2P01877 340 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 CAPN2P17655 700 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 RGS2P41220 211 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 USP17L24Q0WX57 530 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 MAP2K5Q13163 448 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 PDE3AQ14432 1141 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 GRB14Q14449 540 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 LRRC26Q2I0M4 334 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 SLC9C2Q5TAH2 1124 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 LBX2Q6XYB7 198 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 CERS3Q8IU89 383 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 GTF3C2Q8WUA4 911 aaPredicted RBP11.92□□□□□ -0.5
SYN3-205ENST00000459990 DNAJC2Q99543 621 aaKnown RBP11.92□□□□□ -0.5
SYN3-205ENST00000459990 DCP1AQ9NPI6 582 aaPredicted RBP11.92□□□□□ -0.5
SYN3-205ENST00000459990 RABGAP1Q9Y3P9 1069 aa11.92□□□□□ -0.5
SYN3-205ENST00000459990 UNC80Q8N2C7 3258 aa11.91□□□□□ -0.5
SYN3-205ENST00000459990 PRKAB2O43741 272 aa11.91□□□□□ -0.5
SYN3-205ENST00000459990 MAGEA10P43363 369 aaPredicted RBP11.91□□□□□ -0.5
SYN3-205ENST00000459990 TTC6Q86TZ1 520 aa11.91□□□□□ -0.5
SYN3-205ENST00000459990 TRPV1Q8NER1 839 aa11.91□□□□□ -0.5
SYN3-205ENST00000459990 ZBTB40Q9NUA8 1239 aa11.91□□□□□ -0.5
SYN3-205ENST00000459990 COG6Q9Y2V7 657 aa11.91□□□□□ -0.5
SYN3-205ENST00000459990 MYH4Q9Y623 1939 aa11.9□□□□□ -0.5
SYN3-205ENST00000459990 CYP2D7A0A087X1C5 515 aa11.9□□□□□ -0.5
SYN3-205ENST00000459990 PTPREP23469 700 aa11.9□□□□□ -0.5
SYN3-205ENST00000459990 BMP8BP34820 402 aa11.9□□□□□ -0.5
SYN3-205ENST00000459990 USP14P54578 494 aa11.9□□□□□ -0.5
SYN3-205ENST00000459990 TMED8Q6PL24 325 aaPredicted RBP11.9□□□□□ -0.5
SYN3-205ENST00000459990 SIAH1Q8IUQ4 282 aa11.9□□□□□ -0.5
SYN3-205ENST00000459990 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.9□□□□□ -0.5
SYN3-205ENST00000459990 KIF1BPQ96EK5 621 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms