RNA–Protein interactions for RNA: ENST00000458294.5

PBRM1-218, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-218ENST00000458294 CACNB2Q08289 660 aaPredicted RBP32.11■■■□□ 2.73
PBRM1-218ENST00000458294 USP17L24Q0WX57 530 aa32.11■■■□□ 2.73
PBRM1-218ENST00000458294 POTEEQ6S8J3 1075 aa32.11■■■□□ 2.73
PBRM1-218ENST00000458294 ZMYND8Q9ULU4 1186 aaPredicted RBP32.11■■■□□ 2.73
PBRM1-218ENST00000458294 RABGAP1Q9Y3P9 1069 aa32.11■■■□□ 2.73
PBRM1-218ENST00000458294 RLBP1P12271 317 aa32.1■■■□□ 2.73
PBRM1-218ENST00000458294 ERC1Q8IUD2 1116 aa32.1■■■□□ 2.73
PBRM1-218ENST00000458294 CCNA1P78396 465 aa32.09■■■□□ 2.73
PBRM1-218ENST00000458294 ZYXQ15942 572 aaKnown RBP32.09■■■□□ 2.73
PBRM1-218ENST00000458294 CERKLQ49MI3 558 aaPredicted RBP32.09■■■□□ 2.73
PBRM1-218ENST00000458294 CEP85Q6P2H3 762 aa32.09■■■□□ 2.73
PBRM1-218ENST00000458294 KIAA1683Q9H0B3 1180 aa32.09■■■□□ 2.73
PBRM1-218ENST00000458294 ANTXR1Q9H6X2 564 aa32.09■■■□□ 2.73
PBRM1-218ENST00000458294 CWC22Q9HCG8 908 aaKnown RBP32.09■■■□□ 2.73
PBRM1-218ENST00000458294 NDUFB9Q9Y6M9 179 aa32.09■■■□□ 2.73
PBRM1-218ENST00000458294 GLRX3O76003 335 aaKnown RBP32.08■■■□□ 2.73
PBRM1-218ENST00000458294 RAB3GAP1Q15042 981 aa32.08■■■□□ 2.73
PBRM1-218ENST00000458294 ABCB5Q2M3G0 1257 aa32.08■■■□□ 2.73
PBRM1-218ENST00000458294 LRCH3Q96II8 777 aa32.08■■■□□ 2.73
PBRM1-218ENST00000458294 PFASO15067 1338 aa32.07■■■□□ 2.72
PBRM1-218ENST00000458294 MAP2K5Q13163 448 aa32.07■■■□□ 2.72
PBRM1-218ENST00000458294 CCL14Q16627 93 aa32.07■■■□□ 2.72
PBRM1-218ENST00000458294 CATSPERGQ6ZRH7 1159 aa32.07■■■□□ 2.72
PBRM1-218ENST00000458294 CABP5Q9NP86 173 aa32.07■■■□□ 2.72
PBRM1-218ENST00000458294 CNMDO75829 334 aa32.06■■■□□ 2.72
PBRM1-218ENST00000458294 AACSQ86V21 672 aa32.06■■■□□ 2.72
PBRM1-218ENST00000458294 COL6A1P12109 1028 aa32.05■■■□□ 2.72
PBRM1-218ENST00000458294 VCAM1P19320 739 aa32.05■■■□□ 2.72
PBRM1-218ENST00000458294 CCND3P30281 292 aaPredicted RBP32.05■■■□□ 2.72
PBRM1-218ENST00000458294 LHX8Q68G74 356 aa32.05■■■□□ 2.72
PBRM1-218ENST00000458294 LBX2Q6XYB7 198 aa32.05■■■□□ 2.72
PBRM1-218ENST00000458294 RIOK1Q9BRS2 568 aaKnown RBP32.05■■■□□ 2.72
PBRM1-218ENST00000458294 EXOC6BQ9Y2D4 811 aa32.05■■■□□ 2.72
PBRM1-218ENST00000458294 NAV1Q8NEY1 1877 aa32.04■■■□□ 2.72
PBRM1-218ENST00000458294 SYN1P17600 705 aa32.04■■■□□ 2.72
PBRM1-218ENST00000458294 GPR153Q6NV75 609 aa32.04■■■□□ 2.72
PBRM1-218ENST00000458294 EDC3Q96F86 508 aaKnown RBP32.04■■■□□ 2.72
PBRM1-218ENST00000458294 SHMT1P34896 483 aa32.03■■■□□ 2.72
PBRM1-218ENST00000458294 PLCD1P51178 756 aa32.03■■■□□ 2.72
PBRM1-218ENST00000458294 HNRNPUQ00839 825 aaKnown RBP eCLIP32.03■■■□□ 2.72
PBRM1-218ENST00000458294 TTF1Q15361 905 aaPredicted RBP32.03■■■□□ 2.72
PBRM1-218ENST00000458294 ACER1Q8TDN7 264 aa32.03■■■□□ 2.72
PBRM1-218ENST00000458294 FRMPD3Q5JV73 1810 aa32.03■■■□□ 2.72
PBRM1-218ENST00000458294 MAGEA10P43363 369 aaPredicted RBP32.02■■■□□ 2.72
PBRM1-218ENST00000458294 HSP90AB4PQ58FF6 505 aa32.02■■■□□ 2.72
PBRM1-218ENST00000458294 MAGEB6P1A0A0J9YX57 407 aa32.01■■■□□ 2.71
PBRM1-218ENST00000458294 SLC15A5A6NIM6 579 aa32.01■■■□□ 2.71
PBRM1-218ENST00000458294 PTPREP23469 700 aa32.01■■■□□ 2.71
PBRM1-218ENST00000458294 MFSD14CQ5VZR4 134 aa32.01■■■□□ 2.71
PBRM1-218ENST00000458294 POLR3DP05423 398 aaPredicted RBP32■■■□□ 2.71
PBRM1-218ENST00000458294 LRIT3Q3SXY7 679 aa32■■■□□ 2.71
PBRM1-218ENST00000458294 WDR78Q5VTH9 848 aa32■■■□□ 2.71
PBRM1-218ENST00000458294 RPAP3Q9H6T3 665 aaPredicted RBP32■■■□□ 2.71
PBRM1-218ENST00000458294 HOXC6P09630 235 aa31.99■■■□□ 2.71
PBRM1-218ENST00000458294 GUCY1A2P33402 732 aa31.99■■■□□ 2.71
PBRM1-218ENST00000458294 GABPAQ06546 454 aa31.99■■■□□ 2.71
PBRM1-218ENST00000458294 TDHQ8IZJ6 230 aa31.99■■■□□ 2.71
PBRM1-218ENST00000458294 CRNKL1Q9BZJ0 848 aaKnown RBP31.99■■■□□ 2.71
PBRM1-218ENST00000458294 BTBD7Q9P203 1132 aa31.99■■■□□ 2.71
PBRM1-218ENST00000458294 IVNS1ABPQ9Y6Y0 642 aa31.99■■■□□ 2.71
PBRM1-218ENST00000458294 SPDYE16A6NNV3 312 aaPredicted RBP31.98■■■□□ 2.71
PBRM1-218ENST00000458294 GRB14Q14449 540 aa31.98■■■□□ 2.71
PBRM1-218ENST00000458294 RHPN1Q8TCX5 695 aa31.98■■■□□ 2.71
PBRM1-218ENST00000458294 PDE6AP16499 860 aa31.97■■■□□ 2.71
PBRM1-218ENST00000458294 SLC9C2Q5TAH2 1124 aa31.97■■■□□ 2.71
PBRM1-218ENST00000458294 IL1RAPL2Q9NP60 686 aa31.97■■■□□ 2.71
PBRM1-218ENST00000458294 FLRT1Q9NZU1 646 aa31.97■■■□□ 2.71
PBRM1-218ENST00000458294 MSCO60682 206 aa31.96■■■□□ 2.71
PBRM1-218ENST00000458294 SEPT2Q15019 361 aa31.96■■■□□ 2.71
PBRM1-218ENST00000458294 LRRC26Q2I0M4 334 aa31.96■■■□□ 2.71
PBRM1-218ENST00000458294 SLC17A8Q8NDX2 589 aa31.96■■■□□ 2.71
PBRM1-218ENST00000458294 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.96■■■□□ 2.71
PBRM1-218ENST00000458294 UBE2OQ9C0C9 1292 aaKnown RBP31.96■■■□□ 2.71
PBRM1-218ENST00000458294 MCM9Q9NXL9 1143 aa31.96■■■□□ 2.71
PBRM1-218ENST00000458294 COL6A3P12111 3177 aa31.95■■■□□ 2.71
PBRM1-218ENST00000458294 ATP2B2Q01814 1243 aa31.95■■■□□ 2.71
PBRM1-218ENST00000458294 CLASRPQ8N2M8 674 aaKnown RBP31.95■■■□□ 2.71
PBRM1-218ENST00000458294 DDX20Q9UHI6 824 aaKnown RBP31.95■■■□□ 2.71
PBRM1-218ENST00000458294 ZNF236Q9UL36 1845 aa31.93■■■□□ 2.7
PBRM1-218ENST00000458294 COG2Q14746 738 aa31.93■■■□□ 2.7
PBRM1-218ENST00000458294 PANK1Q8TE04 598 aa31.93■■■□□ 2.7
PBRM1-218ENST00000458294 HOXC10Q9NYD6 342 aa31.93■■■□□ 2.7
PBRM1-218ENST00000458294 ZNF532Q9HCE3 1301 aa31.93■■■□□ 2.7
PBRM1-218ENST00000458294 MPHOSPH10O00566 681 aaKnown RBP31.92■■■□□ 2.7
PBRM1-218ENST00000458294 NPLOC4Q8TAT6 608 aa31.92■■■□□ 2.7
PBRM1-218ENST00000458294 LPAR1Q92633 364 aa31.92■■■□□ 2.7
PBRM1-218ENST00000458294 KIF1BPQ96EK5 621 aa31.92■■■□□ 2.7
PBRM1-218ENST00000458294 A0A0G2JMZ2 1700 aa31.92■■■□□ 2.7
PBRM1-218ENST00000458294 A0A1W2PRG0 241 aa31.91■■■□□ 2.7
PBRM1-218ENST00000458294 TCRBV5S4A2TA0A5A2 114 aa31.91■■■□□ 2.7
PBRM1-218ENST00000458294 DEFB123Q8N688 67 aa31.91■■■□□ 2.7
PBRM1-218ENST00000458294 DCP1AQ9NPI6 582 aaPredicted RBP31.91■■■□□ 2.7
PBRM1-218ENST00000458294 GOLIM4O00461 696 aa31.9■■■□□ 2.7
PBRM1-218ENST00000458294 STRNO43815 780 aa31.9■■■□□ 2.7
PBRM1-218ENST00000458294 CNGA1P29973 690 aa31.9■■■□□ 2.7
PBRM1-218ENST00000458294 TMEM179Q6ZVK1 233 aa31.9■■■□□ 2.7
PBRM1-218ENST00000458294 SDR42E1Q8WUS8 393 aa31.9■■■□□ 2.7
PBRM1-218ENST00000458294 DNAJC2Q99543 621 aaKnown RBP31.9■■■□□ 2.7
PBRM1-218ENST00000458294 SENP6Q9GZR1 1112 aaPredicted RBP31.9■■■□□ 2.7
PBRM1-218ENST00000458294 SWAP70Q9UH65 585 aa31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms