RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 UQCRFS1P1P0C7P4 283 aa7.34□□□□□ -1.23
HLA-DPA3-207ENST00000454398 CYP2D6P10635 497 aa7.34□□□□□ -1.23
HLA-DPA3-207ENST00000454398 GUCY1A2P33402 732 aa7.34□□□□□ -1.23
HLA-DPA3-207ENST00000454398 SLFNL1Q499Z3 407 aa7.34□□□□□ -1.23
HLA-DPA3-207ENST00000454398 KIAA1755Q5JYT7 1200 aa7.34□□□□□ -1.23
HLA-DPA3-207ENST00000454398 MORN1Q5T089 497 aa7.34□□□□□ -1.23
HLA-DPA3-207ENST00000454398 ATF7IPQ6VMQ6 1270 aa7.34□□□□□ -1.23
HLA-DPA3-207ENST00000454398 PLEKHH3Q7Z736 793 aa7.34□□□□□ -1.23
HLA-DPA3-207ENST00000454398 METTL16Q86W50 562 aaKnown RBP7.34□□□□□ -1.23
HLA-DPA3-207ENST00000454398 ITPRIPQ8IWB1 547 aa7.34□□□□□ -1.23
HLA-DPA3-207ENST00000454398 CCAR1Q8IX12 1150 aaKnown RBP7.34□□□□□ -1.23
HLA-DPA3-207ENST00000454398 ANKLE1Q8NAG6 615 aa7.34□□□□□ -1.23
HLA-DPA3-207ENST00000454398 TRPV1Q8NER1 839 aa7.34□□□□□ -1.23
HLA-DPA3-207ENST00000454398 LENG1Q96BZ8 264 aaPredicted RBP7.34□□□□□ -1.23
HLA-DPA3-207ENST00000454398 WDR18Q9BV38 432 aa7.34□□□□□ -1.23
HLA-DPA3-207ENST00000454398 BTBD7Q9P203 1132 aa7.34□□□□□ -1.23
HLA-DPA3-207ENST00000454398 COL11A1P12107 1806 aaPredicted RBP7.34□□□□□ -1.24
HLA-DPA3-207ENST00000454398 ZNF236Q9UL36 1845 aa7.34□□□□□ -1.24
HLA-DPA3-207ENST00000454398 SPDYE16A6NNV3 312 aaPredicted RBP7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 USP17L10C9JJH3 530 aa7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 APBB1O00213 710 aa7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 SURF6O75683 361 aaKnown RBP7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 BAG3O95817 575 aa7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 CHGBP05060 677 aa7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 HLA-DOAP06340 250 aa7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 CT47B1P0C2W7 299 aaPredicted RBP7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 CNGA1P29973 690 aa7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 MAPK4P31152 587 aa7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 RGS2P41220 211 aa7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 USP5P45974 858 aa7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 POLA2Q14181 598 aa7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 NPLOC4Q8TAT6 608 aa7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 EAF2Q96CJ1 260 aaPredicted RBP7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 EDC3Q96F86 508 aaKnown RBP7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 GUCD1Q96NT3 240 aa7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 SENP6Q9GZR1 1112 aaPredicted RBP7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 RPAP3Q9H6T3 665 aaPredicted RBP7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 PRDM5Q9NQX1 630 aaPredicted RBP7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 MTMR10Q9NXD2 777 aa7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 EXOC6BQ9Y2D4 811 aa7.33□□□□□ -1.24
HLA-DPA3-207ENST00000454398 MPHOSPH10O00566 681 aaKnown RBP7.32□□□□□ -1.24
HLA-DPA3-207ENST00000454398 PLCG2P16885 1265 aa7.32□□□□□ -1.24
HLA-DPA3-207ENST00000454398 HOXA7P31268 230 aaPredicted RBP7.32□□□□□ -1.24
HLA-DPA3-207ENST00000454398 SHMT1P34896 483 aa7.32□□□□□ -1.24
HLA-DPA3-207ENST00000454398 PLCD1P51178 756 aa7.32□□□□□ -1.24
HLA-DPA3-207ENST00000454398 MAP2K5Q13163 448 aa7.32□□□□□ -1.24
HLA-DPA3-207ENST00000454398 SEPT2Q15019 361 aa7.32□□□□□ -1.24
HLA-DPA3-207ENST00000454398 CCDC158Q5M9N0 1113 aa7.32□□□□□ -1.24
HLA-DPA3-207ENST00000454398 GJC2Q5T442 439 aaPredicted RBP7.32□□□□□ -1.24
HLA-DPA3-207ENST00000454398 AACSQ86V21 672 aa7.32□□□□□ -1.24
HLA-DPA3-207ENST00000454398 SPICE1Q8N0Z3 855 aa7.32□□□□□ -1.24
HLA-DPA3-207ENST00000454398 SDR42E1Q8WUS8 393 aa7.32□□□□□ -1.24
HLA-DPA3-207ENST00000454398 TBC1D2Q9BYX2 928 aa7.32□□□□□ -1.24
HLA-DPA3-207ENST00000454398 TANGO6Q9C0B7 1094 aa7.32□□□□□ -1.24
HLA-DPA3-207ENST00000454398 DHX36Q9H2U1 1008 aaKnown RBP7.32□□□□□ -1.24
HLA-DPA3-207ENST00000454398 IL1RAPL2Q9NP60 686 aa7.32□□□□□ -1.24
HLA-DPA3-207ENST00000454398 HDAC5Q9UQL6 1122 aa7.32□□□□□ -1.24
HLA-DPA3-207ENST00000454398 ATP11BQ9Y2G3 1177 aa7.32□□□□□ -1.24
HLA-DPA3-207ENST00000454398 CYP2D7A0A087X1C5 515 aa7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 A0A1W2PRG0 241 aa7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 XRCC5P13010 732 aaKnown RBP7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 CYBAP13498 195 aa7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 BMP8BP34820 402 aa7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 RTP1P59025 263 aa7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 PPP4CP60510 307 aa7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 GRB14Q14449 540 aa7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 ABCB5Q2M3G0 1257 aa7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 LRIT3Q3SXY7 679 aa7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 TRIM60Q495X7 471 aa7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 FAM47AQ5JRC9 791 aa7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 C9orf50Q5SZB4 431 aa7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 USP17L2Q6R6M4 530 aa7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 FTSJ3Q8IY81 847 aaKnown RBP7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 LCORLQ8N3X6 602 aa7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 SSH3Q8TE77 659 aa7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 ARHGAP45Q92619 1136 aa7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 FERMT2Q96AC1 680 aa7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 DYNLL2Q96FJ2 89 aa7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 DNAJC2Q99543 621 aaKnown RBP7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 DDX20Q9UHI6 824 aaKnown RBP7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 SERPINB13Q9UIV8 391 aa7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 STXBP5LQ9Y2K9 1186 aa7.31□□□□□ -1.24
HLA-DPA3-207ENST00000454398 PLXNA1Q9UIW2 1896 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 USP17L15C9J2P7 530 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 C19orf81C9J6K1 198 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 USP17L13C9JLJ4 530 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 USP17L11C9JVI0 530 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 USP17L18D6R9N7 530 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 USP17L22D6RA61 530 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 USP17L17D6RBQ6 530 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 USP17L19D6RCP7 530 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 USP17L20D6RJB6 530 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 MAP4K4O95819 1239 aaPredicted RBP7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 PDE6AP16499 860 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 PTPREP23469 700 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 ITGB8P26012 769 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 ADORA2AP29274 412 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 USP17L24Q0WX57 530 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 PLS1Q14651 629 aa7.3□□□□□ -1.24
HLA-DPA3-207ENST00000454398 CERKLQ49MI3 558 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms