RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 TRDNQ13061 729 aa17.28■□□□□ 0.36
NCKIPSD-207ENST00000453349 NECTIN1Q15223 517 aa17.28■□□□□ 0.36
NCKIPSD-207ENST00000453349 CCL15Q16663 113 aa17.28■□□□□ 0.36
NCKIPSD-207ENST00000453349 PPP4R3BQ5MIZ7 849 aa17.28■□□□□ 0.36
NCKIPSD-207ENST00000453349 RNF20Q5VTR2 975 aa17.28■□□□□ 0.36
NCKIPSD-207ENST00000453349 TBC1D10CQ8IV04 446 aa17.28■□□□□ 0.36
NCKIPSD-207ENST00000453349 JMYQ8N9B5 988 aa17.28■□□□□ 0.36
NCKIPSD-207ENST00000453349 NEDD1Q8NHV4 660 aa17.28■□□□□ 0.36
NCKIPSD-207ENST00000453349 ESR2Q92731 530 aa17.28■□□□□ 0.36
NCKIPSD-207ENST00000453349 NBPF3Q9H094 633 aa17.28■□□□□ 0.36
NCKIPSD-207ENST00000453349 TACC3Q9Y6A5 838 aa17.28■□□□□ 0.36
NCKIPSD-207ENST00000453349 A0A0G2JLL6 359 aaPredicted RBP17.27■□□□□ 0.36
NCKIPSD-207ENST00000453349 USP14P54578 494 aa17.27■□□□□ 0.36
NCKIPSD-207ENST00000453349 BACE1P56817 501 aa17.27■□□□□ 0.36
NCKIPSD-207ENST00000453349 ICA1Q05084 483 aa17.27■□□□□ 0.36
NCKIPSD-207ENST00000453349 USP17L2Q6R6M4 530 aa17.27■□□□□ 0.36
NCKIPSD-207ENST00000453349 GADL1Q6ZQY3 521 aa17.27■□□□□ 0.36
NCKIPSD-207ENST00000453349 PRRT2Q7Z6L0 340 aaPredicted RBP17.27■□□□□ 0.36
NCKIPSD-207ENST00000453349 FEZ1Q99689 392 aa17.27■□□□□ 0.36
NCKIPSD-207ENST00000453349 SH2D4AQ9H788 454 aa17.27■□□□□ 0.36
NCKIPSD-207ENST00000453349 TMOD4Q9NZQ9 345 aa17.27■□□□□ 0.36
NCKIPSD-207ENST00000453349 SLC27A2O14975 620 aa17.26■□□□□ 0.35
NCKIPSD-207ENST00000453349 EPB41L2O43491 1005 aaKnown RBP17.26■□□□□ 0.35
NCKIPSD-207ENST00000453349 ALDH1A1P00352 501 aa17.26■□□□□ 0.35
NCKIPSD-207ENST00000453349 EEF2P13639 858 aaKnown RBP17.26■□□□□ 0.35
NCKIPSD-207ENST00000453349 ATP2B2Q01814 1243 aa17.26■□□□□ 0.35
NCKIPSD-207ENST00000453349 MTMR2Q13614 643 aa17.26■□□□□ 0.35
NCKIPSD-207ENST00000453349 SH3D19Q5HYK7 790 aa17.26■□□□□ 0.35
NCKIPSD-207ENST00000453349 CREB3L3Q68CJ9 461 aa17.26■□□□□ 0.35
NCKIPSD-207ENST00000453349 IFNL1Q8IU54 200 aa17.26■□□□□ 0.35
NCKIPSD-207ENST00000453349 NYAP2Q9P242 653 aa17.26■□□□□ 0.35
NCKIPSD-207ENST00000453349 ZKSCAN1P17029 563 aaPredicted RBP17.25■□□□□ 0.35
NCKIPSD-207ENST00000453349 HMGCS2P54868 508 aa17.25■□□□□ 0.35
NCKIPSD-207ENST00000453349 PROCA1Q8NCQ7 364 aaPredicted RBP17.25■□□□□ 0.35
NCKIPSD-207ENST00000453349 NCOA7Q8NI08 942 aa17.25■□□□□ 0.35
NCKIPSD-207ENST00000453349 ACER1Q8TDN7 264 aa17.25■□□□□ 0.35
NCKIPSD-207ENST00000453349 BRI3BPQ8WY22 251 aa17.25■□□□□ 0.35
NCKIPSD-207ENST00000453349 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.25■□□□□ 0.35
NCKIPSD-207ENST00000453349 KIAA1683Q9H0B3 1180 aa17.25■□□□□ 0.35
NCKIPSD-207ENST00000453349 TCP11L1Q9NUJ3 509 aa17.25■□□□□ 0.35
NCKIPSD-207ENST00000453349 MTMR4Q9NYA4 1195 aa17.25■□□□□ 0.35
NCKIPSD-207ENST00000453349 CLIP2Q9UDT6 1046 aa17.25■□□□□ 0.35
NCKIPSD-207ENST00000453349 NEDD4P46934 1319 aa17.24■□□□□ 0.35
NCKIPSD-207ENST00000453349 PHIPQ8WWQ0 1821 aa17.24■□□□□ 0.35
NCKIPSD-207ENST00000453349 IGKV6D-41A0A0C4DH26 115 aa17.24■□□□□ 0.35
NCKIPSD-207ENST00000453349 B4E1Z4 1266 aa17.24■□□□□ 0.35
NCKIPSD-207ENST00000453349 E7EWF7 191 aa17.24■□□□□ 0.35
NCKIPSD-207ENST00000453349 KDM4AO75164 1064 aa17.24■□□□□ 0.35
NCKIPSD-207ENST00000453349 TTLL1O95922 423 aa17.24■□□□□ 0.35
NCKIPSD-207ENST00000453349 ZYXQ15942 572 aaKnown RBP17.24■□□□□ 0.35
NCKIPSD-207ENST00000453349 CCDC178Q5BJE1 867 aa17.24■□□□□ 0.35
NCKIPSD-207ENST00000453349 RALYLQ86SE5 291 aaKnown RBP17.24■□□□□ 0.35
NCKIPSD-207ENST00000453349 ANKRD23Q86SG2 305 aa17.24■□□□□ 0.35
NCKIPSD-207ENST00000453349 IQCA1Q86XH1 822 aa17.24■□□□□ 0.35
NCKIPSD-207ENST00000453349 SIAH1Q8IUQ4 282 aa17.24■□□□□ 0.35
NCKIPSD-207ENST00000453349 CEP95Q96GE4 821 aa17.24■□□□□ 0.35
NCKIPSD-207ENST00000453349 PTPN18Q99952 460 aa17.24■□□□□ 0.35
NCKIPSD-207ENST00000453349 ZSWIM5Q9P217 1185 aa17.24■□□□□ 0.35
NCKIPSD-207ENST00000453349 TMX2Q9Y320 296 aa17.24■□□□□ 0.35
NCKIPSD-207ENST00000453349 LAMA4Q16363 1823 aa17.24■□□□□ 0.35
NCKIPSD-207ENST00000453349 THSD7BQ9C0I4 1608 aa17.23■□□□□ 0.35
NCKIPSD-207ENST00000453349 A0A1W2PRG0 241 aa17.23■□□□□ 0.35
NCKIPSD-207ENST00000453349 BTBD19C9JJ37 291 aa17.23■□□□□ 0.35
NCKIPSD-207ENST00000453349 MCCP23508 829 aa17.23■□□□□ 0.35
NCKIPSD-207ENST00000453349 PABPC4Q13310 644 aaKnown RBP eCLIP17.23■□□□□ 0.35
NCKIPSD-207ENST00000453349 CLEC10AQ8IUN9 316 aa17.23■□□□□ 0.35
NCKIPSD-207ENST00000453349 TTC14Q96N46 770 aa17.23■□□□□ 0.35
NCKIPSD-207ENST00000453349 USP26Q9BXU7 913 aa17.23■□□□□ 0.35
NCKIPSD-207ENST00000453349 ZCCHC17Q9NP64 241 aaKnown RBP17.23■□□□□ 0.35
NCKIPSD-207ENST00000453349 IL17RBQ9NRM6 502 aa17.23■□□□□ 0.35
NCKIPSD-207ENST00000453349 WBP1LQ9NX94 342 aa17.23■□□□□ 0.35
NCKIPSD-207ENST00000453349 RNF186Q9NXI6 227 aa17.23■□□□□ 0.35
NCKIPSD-207ENST00000453349 PLIN4Q96Q06 1357 aa17.23■□□□□ 0.35
NCKIPSD-207ENST00000453349 PDHXO00330 501 aa17.22■□□□□ 0.35
NCKIPSD-207ENST00000453349 IGF2BP3O00425 579 aaKnown RBP eCLIP17.22■□□□□ 0.35
NCKIPSD-207ENST00000453349 CA12O43570 354 aa17.22■□□□□ 0.35
NCKIPSD-207ENST00000453349 RAD21O60216 631 aa17.22■□□□□ 0.35
NCKIPSD-207ENST00000453349 TRPA1O75762 1119 aa17.22■□□□□ 0.35
NCKIPSD-207ENST00000453349 MOGSQ13724 837 aa17.22■□□□□ 0.35
NCKIPSD-207ENST00000453349 MKL1Q969V6 931 aa17.22■□□□□ 0.35
NCKIPSD-207ENST00000453349 GOPCQ9HD26 462 aa17.22■□□□□ 0.35
NCKIPSD-207ENST00000453349 EMILIN3Q9NT22 766 aa17.22■□□□□ 0.35
NCKIPSD-207ENST00000453349 STX8Q9UNK0 236 aa17.22■□□□□ 0.35
NCKIPSD-207ENST00000453349 AGTPBP1Q9UPW5 1226 aa17.22■□□□□ 0.35
NCKIPSD-207ENST00000453349 NMT2O60551 498 aa17.21■□□□□ 0.35
NCKIPSD-207ENST00000453349 OSBPP22059 807 aa17.21■□□□□ 0.35
NCKIPSD-207ENST00000453349 HSPA4P34932 840 aa17.21■□□□□ 0.35
NCKIPSD-207ENST00000453349 KRT32Q14532 448 aa17.21■□□□□ 0.35
NCKIPSD-207ENST00000453349 TSGA10IPQ3SY00 556 aa17.21■□□□□ 0.35
NCKIPSD-207ENST00000453349 GPAT2Q6NUI2 795 aa17.21■□□□□ 0.35
NCKIPSD-207ENST00000453349 FAM43AQ8N2R8 423 aa17.21■□□□□ 0.35
NCKIPSD-207ENST00000453349 C12orf42Q96LP6 360 aa17.21■□□□□ 0.35
NCKIPSD-207ENST00000453349 ZKSCAN3Q9BRR0 538 aa17.21■□□□□ 0.35
NCKIPSD-207ENST00000453349 UBAC1Q9BSL1 405 aa17.21■□□□□ 0.35
NCKIPSD-207ENST00000453349 VCPKMTQ9H867 229 aa17.21■□□□□ 0.35
NCKIPSD-207ENST00000453349 SYNPO2Q9UMS6 1093 aa17.21■□□□□ 0.35
NCKIPSD-207ENST00000453349 SLC45A1Q9Y2W3 748 aa17.21■□□□□ 0.35
NCKIPSD-207ENST00000453349 DGKZQ13574 1117 aa17.2■□□□□ 0.34
NCKIPSD-207ENST00000453349 TAF1CQ15572 869 aaPredicted RBP17.2■□□□□ 0.34
NCKIPSD-207ENST00000453349 DGKHQ86XP1 1220 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms