RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 KIF22Q14807 665 aa18.48■□□□□ 0.55
VPS8-213ENST00000453056 SEPT2Q15019 361 aa18.48■□□□□ 0.55
VPS8-213ENST00000453056 CCDC136Q96JN2 1154 aa18.48■□□□□ 0.55
VPS8-213ENST00000453056 SH2D4AQ9H788 454 aa18.48■□□□□ 0.55
VPS8-213ENST00000453056 AKR1B1P15121 316 aa18.47■□□□□ 0.55
VPS8-213ENST00000453056 IRX3P78415 501 aaPredicted RBP18.47■□□□□ 0.55
VPS8-213ENST00000453056 ICA1Q05084 483 aa18.47■□□□□ 0.55
VPS8-213ENST00000453056 PDE4BQ07343 736 aa18.47■□□□□ 0.55
VPS8-213ENST00000453056 PKN2Q16513 984 aaKnown RBP18.47■□□□□ 0.55
VPS8-213ENST00000453056 TREML2Q5T2D2 321 aa18.47■□□□□ 0.55
VPS8-213ENST00000453056 MCOLN1Q9GZU1 580 aa18.47■□□□□ 0.55
VPS8-213ENST00000453056 KIAA1683Q9H0B3 1180 aa18.47■□□□□ 0.55
VPS8-213ENST00000453056 ARHGEF10LQ9HCE6 1279 aa18.47■□□□□ 0.55
VPS8-213ENST00000453056 ADGRA2Q96PE1 1338 aa18.47■□□□□ 0.55
VPS8-213ENST00000453056 CYP2C8P10632 490 aa18.46■□□□□ 0.55
VPS8-213ENST00000453056 GSPT1P15170 499 aaKnown RBP18.46■□□□□ 0.55
VPS8-213ENST00000453056 GUCY1A2P33402 732 aa18.46■□□□□ 0.55
VPS8-213ENST00000453056 PPARAQ07869 468 aa18.46■□□□□ 0.55
VPS8-213ENST00000453056 CWC27Q6UX04 472 aaKnown RBP18.46■□□□□ 0.55
VPS8-213ENST00000453056 CD99L2Q8TCZ2 262 aa18.46■□□□□ 0.55
VPS8-213ENST00000453056 GREB1LQ9C091 1923 aaPredicted RBP18.46■□□□□ 0.55
VPS8-213ENST00000453056 ZMYM6O95789 1325 aa18.46■□□□□ 0.55
VPS8-213ENST00000453056 SMIM22K7EJ46 135 aa18.45■□□□□ 0.54
VPS8-213ENST00000453056 ALX1Q15699 326 aa18.45■□□□□ 0.54
VPS8-213ENST00000453056 ZYXQ15942 572 aaKnown RBP18.45■□□□□ 0.54
VPS8-213ENST00000453056 C17orf99Q6UX52 265 aa18.45■□□□□ 0.54
VPS8-213ENST00000453056 ZNF589Q86UQ0 364 aaPredicted RBP18.45■□□□□ 0.54
VPS8-213ENST00000453056 STK11IPQ8N1F8 1099 aa18.45■□□□□ 0.54
VPS8-213ENST00000453056 C12orf42Q96LP6 360 aa18.45■□□□□ 0.54
VPS8-213ENST00000453056 EFCC1Q9HA90 598 aa18.45■□□□□ 0.54
VPS8-213ENST00000453056 CPA4Q9UI42 421 aa18.45■□□□□ 0.54
VPS8-213ENST00000453056 TRIM17Q9Y577 477 aa18.45■□□□□ 0.54
VPS8-213ENST00000453056 RASA1P20936 1047 aa18.44■□□□□ 0.54
VPS8-213ENST00000453056 GCLCP48506 637 aaPredicted RBP18.44■□□□□ 0.54
VPS8-213ENST00000453056 VPS53Q5VIR6 699 aa18.44■□□□□ 0.54
VPS8-213ENST00000453056 ZNF444Q8N0Y2 327 aaPredicted RBP18.44■□□□□ 0.54
VPS8-213ENST00000453056 ACER1Q8TDN7 264 aa18.44■□□□□ 0.54
VPS8-213ENST00000453056 ASCC2Q9H1I8 757 aaPredicted RBP18.44■□□□□ 0.54
VPS8-213ENST00000453056 KANSL2Q9H9L4 492 aa18.44■□□□□ 0.54
VPS8-213ENST00000453056 MYH4Q9Y623 1939 aa18.44■□□□□ 0.54
VPS8-213ENST00000453056 RAD50Q92878 1312 aa18.44■□□□□ 0.54
VPS8-213ENST00000453056 MGAMO43451 1857 aa18.43■□□□□ 0.54
VPS8-213ENST00000453056 FOXP2O15409 715 aa18.43■□□□□ 0.54
VPS8-213ENST00000453056 HSPD1P10809 573 aaKnown RBP18.43■□□□□ 0.54
VPS8-213ENST00000453056 BCRP11274 1271 aa18.43■□□□□ 0.54
VPS8-213ENST00000453056 HOXA7P31268 230 aaPredicted RBP18.43■□□□□ 0.54
VPS8-213ENST00000453056 LACTBP83111 547 aaPredicted RBP18.43■□□□□ 0.54
VPS8-213ENST00000453056 GTF3C2Q8WUA4 911 aaPredicted RBP18.43■□□□□ 0.54
VPS8-213ENST00000453056 RUFY2Q8WXA3 655 aa18.43■□□□□ 0.54
VPS8-213ENST00000453056 EMILIN3Q9NT22 766 aa18.43■□□□□ 0.54
VPS8-213ENST00000453056 LAMA4Q16363 1823 aa18.43■□□□□ 0.54
VPS8-213ENST00000453056 VCAM1P19320 739 aa18.42■□□□□ 0.54
VPS8-213ENST00000453056 ATP2B2Q01814 1243 aa18.42■□□□□ 0.54
VPS8-213ENST00000453056 FBXO46Q6PJ61 603 aaPredicted RBP18.42■□□□□ 0.54
VPS8-213ENST00000453056 OTOP1Q7RTM1 612 aa18.42■□□□□ 0.54
VPS8-213ENST00000453056 LPAR1Q92633 364 aa18.42■□□□□ 0.54
VPS8-213ENST00000453056 ABHD8Q96I13 439 aa18.42■□□□□ 0.54
VPS8-213ENST00000453056 PLIN4Q96Q06 1357 aa18.42■□□□□ 0.54
VPS8-213ENST00000453056 USP17L15C9J2P7 530 aa18.41■□□□□ 0.54
VPS8-213ENST00000453056 USP17L13C9JLJ4 530 aa18.41■□□□□ 0.54
VPS8-213ENST00000453056 USP17L11C9JVI0 530 aa18.41■□□□□ 0.54
VPS8-213ENST00000453056 USP17L18D6R9N7 530 aa18.41■□□□□ 0.54
VPS8-213ENST00000453056 USP17L22D6RA61 530 aa18.41■□□□□ 0.54
VPS8-213ENST00000453056 USP17L17D6RBQ6 530 aa18.41■□□□□ 0.54
VPS8-213ENST00000453056 USP17L19D6RCP7 530 aa18.41■□□□□ 0.54
VPS8-213ENST00000453056 USP17L20D6RJB6 530 aa18.41■□□□□ 0.54
VPS8-213ENST00000453056 PRDM1O75626 825 aa18.41■□□□□ 0.54
VPS8-213ENST00000453056 GNRH1P01148 92 aa18.41■□□□□ 0.54
VPS8-213ENST00000453056 USP17L24Q0WX57 530 aa18.41■□□□□ 0.54
VPS8-213ENST00000453056 FAM110CQ1W6H9 321 aa18.41■□□□□ 0.54
VPS8-213ENST00000453056 PPP4R3BQ5MIZ7 849 aa18.41■□□□□ 0.54
VPS8-213ENST00000453056 CLEC10AQ8IUN9 316 aa18.41■□□□□ 0.54
VPS8-213ENST00000453056 ANAPC4Q9UJX5 808 aa18.41■□□□□ 0.54
VPS8-213ENST00000453056 ZSWIM8A7E2V4 1837 aa18.4■□□□□ 0.54
VPS8-213ENST00000453056 FGAP02671 866 aa18.4■□□□□ 0.54
VPS8-213ENST00000453056 TSPY3P0CV98 308 aa18.4■□□□□ 0.54
VPS8-213ENST00000453056 TSPY8P0CW00 308 aa18.4■□□□□ 0.54
VPS8-213ENST00000453056 FCGRTP55899 365 aa18.4■□□□□ 0.54
VPS8-213ENST00000453056 ERICH6BQ5W0A0 696 aa18.4■□□□□ 0.54
VPS8-213ENST00000453056 ANKRD13CQ8N6S4 541 aa18.4■□□□□ 0.54
VPS8-213ENST00000453056 GOPCQ9HD26 462 aa18.4■□□□□ 0.54
VPS8-213ENST00000453056 TMX2Q9Y320 296 aa18.4■□□□□ 0.54
VPS8-213ENST00000453056 DOCK3Q8IZD9 2030 aa18.4■□□□□ 0.54
VPS8-213ENST00000453056 A0A1W2PRG0 241 aa18.39■□□□□ 0.53
VPS8-213ENST00000453056 EEF2P13639 858 aaKnown RBP18.39■□□□□ 0.53
VPS8-213ENST00000453056 HOXD10P28358 340 aa18.39■□□□□ 0.53
VPS8-213ENST00000453056 PSMC4P43686 418 aa18.39■□□□□ 0.53
VPS8-213ENST00000453056 HERVK_113P62684 666 aa18.39■□□□□ 0.53
VPS8-213ENST00000453056 CTDSPL2Q05D32 466 aa18.39■□□□□ 0.53
VPS8-213ENST00000453056 DSCC1Q9BVC3 393 aa18.39■□□□□ 0.53
VPS8-213ENST00000453056 RPAP3Q9H6T3 665 aaPredicted RBP18.39■□□□□ 0.53
VPS8-213ENST00000453056 VCPKMTQ9H867 229 aa18.39■□□□□ 0.53
VPS8-213ENST00000453056 KIAA0100Q14667 2235 aaKnown RBP18.38■□□□□ 0.53
VPS8-213ENST00000453056 FMNL1O95466 1100 aaPredicted RBP18.38■□□□□ 0.53
VPS8-213ENST00000453056 PCP11498 1178 aaKnown RBP18.38■□□□□ 0.53
VPS8-213ENST00000453056 PRMT2P55345 433 aa18.38■□□□□ 0.53
VPS8-213ENST00000453056 NEDD1Q8NHV4 660 aa18.38■□□□□ 0.53
VPS8-213ENST00000453056 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.38■□□□□ 0.53
VPS8-213ENST00000453056 TANGO6Q9C0B7 1094 aa18.38■□□□□ 0.53
VPS8-213ENST00000453056 RNF41Q9H4P4 317 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms