RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 GJB1P08034 283 aa26.02■■□□□ 1.76
C9orf3-208ENST00000451893 ATP8A2Q9NTI2 1148 aa26.02■■□□□ 1.76
C9orf3-208ENST00000451893 SWAP70Q9UH65 585 aa26.02■■□□□ 1.76
C9orf3-208ENST00000451893 BAZ2AQ9UIF9 1905 aaKnown RBP26.02■■□□□ 1.76
C9orf3-208ENST00000451893 USP17L15C9J2P7 530 aa26.01■■□□□ 1.75
C9orf3-208ENST00000451893 USP17L13C9JLJ4 530 aa26.01■■□□□ 1.75
C9orf3-208ENST00000451893 USP17L11C9JVI0 530 aa26.01■■□□□ 1.75
C9orf3-208ENST00000451893 USP17L18D6R9N7 530 aa26.01■■□□□ 1.75
C9orf3-208ENST00000451893 USP17L22D6RA61 530 aa26.01■■□□□ 1.75
C9orf3-208ENST00000451893 USP17L17D6RBQ6 530 aa26.01■■□□□ 1.75
C9orf3-208ENST00000451893 USP17L19D6RCP7 530 aa26.01■■□□□ 1.75
C9orf3-208ENST00000451893 USP17L20D6RJB6 530 aa26.01■■□□□ 1.75
C9orf3-208ENST00000451893 SHMT1P34896 483 aa26.01■■□□□ 1.75
C9orf3-208ENST00000451893 USP17L24Q0WX57 530 aa26.01■■□□□ 1.75
C9orf3-208ENST00000451893 UNC93B1Q9H1C4 597 aa26.01■■□□□ 1.75
C9orf3-208ENST00000451893 EMILIN3Q9NT22 766 aa26.01■■□□□ 1.75
C9orf3-208ENST00000451893 MORF4L1Q9UBU8 362 aa26.01■■□□□ 1.75
C9orf3-208ENST00000451893 GJA8P48165 433 aa26■■□□□ 1.75
C9orf3-208ENST00000451893 UBE3CQ15386 1083 aa26■■□□□ 1.75
C9orf3-208ENST00000451893 SLC4A4Q9Y6R1 1079 aa26■■□□□ 1.75
C9orf3-208ENST00000451893 WDR78Q5VTH9 848 aa25.99■■□□□ 1.75
C9orf3-208ENST00000451893 CENPQQ7L2Z9 268 aaPredicted RBP25.99■■□□□ 1.75
C9orf3-208ENST00000451893 U2AF1L4Q8WU68 220 aaKnown RBP25.99■■□□□ 1.75
C9orf3-208ENST00000451893 NUDT12Q9BQG2 462 aa25.99■■□□□ 1.75
C9orf3-208ENST00000451893 KIAA1683Q9H0B3 1180 aa25.99■■□□□ 1.75
C9orf3-208ENST00000451893 DCTPP1Q9H773 170 aa25.99■■□□□ 1.75
C9orf3-208ENST00000451893 PRKAB2O43741 272 aa25.98■■□□□ 1.75
C9orf3-208ENST00000451893 TFRCP02786 760 aaKnown RBP25.98■■□□□ 1.75
C9orf3-208ENST00000451893 CYP2D6P10635 497 aa25.98■■□□□ 1.75
C9orf3-208ENST00000451893 MAPK4P31152 587 aa25.98■■□□□ 1.75
C9orf3-208ENST00000451893 ERVK-9P63128 1117 aa25.98■■□□□ 1.75
C9orf3-208ENST00000451893 ERVK-24P63145 666 aa25.98■■□□□ 1.75
C9orf3-208ENST00000451893 SEPT2Q15019 361 aa25.98■■□□□ 1.75
C9orf3-208ENST00000451893 SLFNL1Q499Z3 407 aa25.98■■□□□ 1.75
C9orf3-208ENST00000451893 DPF3Q92784 378 aa25.98■■□□□ 1.75
C9orf3-208ENST00000451893 HMGCRP04035 888 aa25.97■■□□□ 1.75
C9orf3-208ENST00000451893 CCNA1P78396 465 aa25.97■■□□□ 1.75
C9orf3-208ENST00000451893 LRRFIP1Q32MZ4 808 aaKnown RBP25.97■■□□□ 1.75
C9orf3-208ENST00000451893 TMEM179Q6ZVK1 233 aa25.97■■□□□ 1.75
C9orf3-208ENST00000451893 ACER1Q8TDN7 264 aa25.97■■□□□ 1.75
C9orf3-208ENST00000451893 SOCS4Q8WXH5 440 aa25.97■■□□□ 1.75
C9orf3-208ENST00000451893 C12orf42Q96LP6 360 aa25.97■■□□□ 1.75
C9orf3-208ENST00000451893 HTATIP2Q9BUP3 242 aa25.97■■□□□ 1.75
C9orf3-208ENST00000451893 VCAM1P19320 739 aa25.96■■□□□ 1.75
C9orf3-208ENST00000451893 CYP2B6P20813 491 aa25.96■■□□□ 1.75
C9orf3-208ENST00000451893 GABPAQ06546 454 aa25.96■■□□□ 1.75
C9orf3-208ENST00000451893 SHISA4Q96DD7 197 aa25.96■■□□□ 1.75
C9orf3-208ENST00000451893 DYNLL2Q96FJ2 89 aa25.96■■□□□ 1.75
C9orf3-208ENST00000451893 DEFB118Q96PH6 123 aa25.96■■□□□ 1.75
C9orf3-208ENST00000451893 ARHGEF10LQ9HCE6 1279 aa25.96■■□□□ 1.75
C9orf3-208ENST00000451893 GLRX3O76003 335 aaKnown RBP25.95■■□□□ 1.74
C9orf3-208ENST00000451893 FARP2O94887 1054 aaPredicted RBP25.95■■□□□ 1.74
C9orf3-208ENST00000451893 SGPL1O95470 568 aa25.95■■□□□ 1.74
C9orf3-208ENST00000451893 SLC44A5Q8NCS7 719 aa25.95■■□□□ 1.74
C9orf3-208ENST00000451893 TANGO6Q9C0B7 1094 aa25.95■■□□□ 1.74
C9orf3-208ENST00000451893 RWDD1Q9H446 243 aaPredicted RBP25.95■■□□□ 1.74
C9orf3-208ENST00000451893 RPAP3Q9H6T3 665 aaPredicted RBP25.95■■□□□ 1.74
C9orf3-208ENST00000451893 SH2D4AQ9H788 454 aa25.95■■□□□ 1.74
C9orf3-208ENST00000451893 TXNRD2Q9NNW7 524 aa25.95■■□□□ 1.74
C9orf3-208ENST00000451893 ERC2O15083 957 aa25.94■■□□□ 1.74
C9orf3-208ENST00000451893 PEX10O60683 326 aa25.94■■□□□ 1.74
C9orf3-208ENST00000451893 TSHZ3Q63HK5 1081 aa25.94■■□□□ 1.74
C9orf3-208ENST00000451893 CATSPERGQ6ZRH7 1159 aa25.94■■□□□ 1.74
C9orf3-208ENST00000451893 RBPJLQ9UBG7 517 aa25.94■■□□□ 1.74
C9orf3-208ENST00000451893 RABGAP1Q9Y3P9 1069 aa25.94■■□□□ 1.74
C9orf3-208ENST00000451893 USP17L12C9JPN9 530 aa25.93■■□□□ 1.74
C9orf3-208ENST00000451893 USP17L21D6R901 530 aa25.93■■□□□ 1.74
C9orf3-208ENST00000451893 ATP2B2Q01814 1243 aa25.93■■□□□ 1.74
C9orf3-208ENST00000451893 EVX2Q03828 476 aa25.93■■□□□ 1.74
C9orf3-208ENST00000451893 ICA1Q05084 483 aa25.93■■□□□ 1.74
C9orf3-208ENST00000451893 PLEKHH3Q7Z736 793 aa25.93■■□□□ 1.74
C9orf3-208ENST00000451893 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.93■■□□□ 1.741e-7■■■■■ 46.4
C9orf3-208ENST00000451893 HMX1Q9NP08 348 aaPredicted RBP25.93■■□□□ 1.74
C9orf3-208ENST00000451893 IVNS1ABPQ9Y6Y0 642 aa25.93■■□□□ 1.74
C9orf3-208ENST00000451893 CAPN2P17655 700 aa25.92■■□□□ 1.74
C9orf3-208ENST00000451893 RGS2P41220 211 aa25.92■■□□□ 1.74
C9orf3-208ENST00000451893 GPR142Q7Z601 462 aa25.92■■□□□ 1.74
C9orf3-208ENST00000451893 KBTBD3Q8NAB2 608 aa25.92■■□□□ 1.74
C9orf3-208ENST00000451893 CCDC17Q96LX7 622 aa25.92■■□□□ 1.74
C9orf3-208ENST00000451893 PUS7LQ9H0K6 701 aaKnown RBP25.92■■□□□ 1.74
C9orf3-208ENST00000451893 ARPP21Q9UBL0 812 aaPredicted RBP25.92■■□□□ 1.74
C9orf3-208ENST00000451893 CYP2D7A0A087X1C5 515 aa25.91■■□□□ 1.74
C9orf3-208ENST00000451893 RAD21O60216 631 aa25.91■■□□□ 1.74
C9orf3-208ENST00000451893 CHGBP05060 677 aa25.91■■□□□ 1.74
C9orf3-208ENST00000451893 ZFYP08048 801 aaPredicted RBP25.91■■□□□ 1.74
C9orf3-208ENST00000451893 ZKSCAN1P17029 563 aaPredicted RBP25.91■■□□□ 1.74
C9orf3-208ENST00000451893 GUCY1A2P33402 732 aa25.91■■□□□ 1.74
C9orf3-208ENST00000451893 C12orf60Q5U649 245 aa25.91■■□□□ 1.74
C9orf3-208ENST00000451893 SAMD1Q6SPF0 538 aaPredicted RBP25.91■■□□□ 1.74
C9orf3-208ENST00000451893 TRMT44Q8IYL2 757 aaKnown RBP25.91■■□□□ 1.74
C9orf3-208ENST00000451893 GJD2Q9UKL4 321 aa25.91■■□□□ 1.74
C9orf3-208ENST00000451893 BRCA2P51587 3418 aa25.91■■□□□ 1.74
C9orf3-208ENST00000451893 SLC34A2O95436 690 aa25.9■■□□□ 1.74
C9orf3-208ENST00000451893 APPP05067 770 aa25.9■■□□□ 1.74
C9orf3-208ENST00000451893 AKR1B1P15121 316 aa25.9■■□□□ 1.74
C9orf3-208ENST00000451893 CDK8P49336 464 aa25.9■■□□□ 1.74
C9orf3-208ENST00000451893 Q3C1V9 767 aa25.9■■□□□ 1.74
C9orf3-208ENST00000451893 APPBP2Q92624 585 aa25.9■■□□□ 1.74
C9orf3-208ENST00000451893 PORCNQ9H237 461 aa25.9■■□□□ 1.74
C9orf3-208ENST00000451893 PCDHB15Q9Y5E8 787 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms