RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 FRAT2O75474 233 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P22-202ENST00000451823 CEACAM5P06731 702 aa5.32□□□□□ -1.56
HMGB3P22-202ENST00000451823 TMC7Q7Z402 723 aa5.32□□□□□ -1.56
HMGB3P22-202ENST00000451823 LRRN4CLQ8ND94 238 aa5.32□□□□□ -1.56
HMGB3P22-202ENST00000451823 TMEM40Q8WWA1 233 aa5.32□□□□□ -1.56
HMGB3P22-202ENST00000451823 RRAGDQ9NQL2 400 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P22-202ENST00000451823 PRDM7Q9NQW5 492 aa5.32□□□□□ -1.56
HMGB3P22-202ENST00000451823 BIN2Q9UBW5 565 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P22-202ENST00000451823 SNX11Q9Y5W9 270 aa5.32□□□□□ -1.56
HMGB3P22-202ENST00000451823 EIF4G3O43432 1585 aaKnown RBP5.32□□□□□ -1.56
HMGB3P22-202ENST00000451823 NUP153P49790 1475 aaKnown RBP5.32□□□□□ -1.56
HMGB3P22-202ENST00000451823 CAMSAP2Q08AD1 1489 aa5.32□□□□□ -1.56
HMGB3P22-202ENST00000451823 ZMYM3Q14202 1370 aa5.31□□□□□ -1.56
HMGB3P22-202ENST00000451823 ITSN2Q9NZM3 1697 aa5.31□□□□□ -1.56
HMGB3P22-202ENST00000451823 FSD2A1L4K1 749 aa5.31□□□□□ -1.56
HMGB3P22-202ENST00000451823 DCDC2CA8MYV0 355 aa5.31□□□□□ -1.56
HMGB3P22-202ENST00000451823 ITIH2P19823 946 aa5.31□□□□□ -1.56
HMGB3P22-202ENST00000451823 BMP6P22004 513 aa5.31□□□□□ -1.56
HMGB3P22-202ENST00000451823 ERVK-24P63145 666 aa5.31□□□□□ -1.56
HMGB3P22-202ENST00000451823 PPM1JQ5JR12 505 aa5.31□□□□□ -1.56
HMGB3P22-202ENST00000451823 TRMT2AQ8IZ69 625 aaKnown RBP5.31□□□□□ -1.56
HMGB3P22-202ENST00000451823 ACSBG1Q96GR2 724 aa5.31□□□□□ -1.56
HMGB3P22-202ENST00000451823 PRDM15P57071 1507 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P22-202ENST00000451823 EIF3AQ14152 1382 aaKnown RBP5.3□□□□□ -1.56
HMGB3P22-202ENST00000451823 ADAMTS12P58397 1594 aa5.3□□□□□ -1.56
HMGB3P22-202ENST00000451823 ABCC2Q92887 1545 aa5.3□□□□□ -1.56
HMGB3P22-202ENST00000451823 GPATCH8Q9UKJ3 1502 aaKnown RBP5.3□□□□□ -1.56
HMGB3P22-202ENST00000451823 SOWAHDA6NJG2 315 aa5.3□□□□□ -1.56
HMGB3P22-202ENST00000451823 ZNF252P-AS1Q0IIN9 211 aa5.3□□□□□ -1.56
HMGB3P22-202ENST00000451823 SLC23A3Q6PIS1 610 aa5.3□□□□□ -1.56
HMGB3P22-202ENST00000451823 CDC37L1Q7L3B6 337 aa5.3□□□□□ -1.56
HMGB3P22-202ENST00000451823 SKAP1Q86WV1 359 aa5.3□□□□□ -1.56
HMGB3P22-202ENST00000451823 NECAB3Q96P71 396 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P22-202ENST00000451823 ANTXR1Q9H6X2 564 aa5.3□□□□□ -1.56
HMGB3P22-202ENST00000451823 PICK1Q9NRD5 415 aa5.3□□□□□ -1.56
HMGB3P22-202ENST00000451823 PRAG1Q86YV5 1406 aa5.3□□□□□ -1.56
HMGB3P22-202ENST00000451823 KIAA0556O60303 1618 aa5.3□□□□□ -1.56
HMGB3P22-202ENST00000451823 DISP1Q96F81 1524 aa5.29□□□□□ -1.56
HMGB3P22-202ENST00000451823 PBRM1Q86U86 1689 aa5.29□□□□□ -1.56
HMGB3P22-202ENST00000451823 ST20-MTHFSA0A0A6YYL1 179 aa5.29□□□□□ -1.56
HMGB3P22-202ENST00000451823 DBX1A6NMT0 343 aa5.29□□□□□ -1.56
HMGB3P22-202ENST00000451823 PLIN1O60240 522 aa5.29□□□□□ -1.56
HMGB3P22-202ENST00000451823 ZP2Q05996 745 aa5.29□□□□□ -1.56
HMGB3P22-202ENST00000451823 PDE4CQ08493 712 aa5.29□□□□□ -1.56
HMGB3P22-202ENST00000451823 DSC3Q14574 896 aa5.29□□□□□ -1.56
HMGB3P22-202ENST00000451823 C20orf194Q5TEA3 1177 aa5.29□□□□□ -1.56
HMGB3P22-202ENST00000451823 ANGEL2Q5VTE6 544 aaKnown RBP5.29□□□□□ -1.56
HMGB3P22-202ENST00000451823 TPTE2Q6XPS3 522 aa5.29□□□□□ -1.56
HMGB3P22-202ENST00000451823 KSR1Q8IVT5 923 aa5.29□□□□□ -1.56
HMGB3P22-202ENST00000451823 PKNOX2Q96KN3 472 aa5.29□□□□□ -1.56
HMGB3P22-202ENST00000451823 TNKS2Q9H2K2 1166 aa5.29□□□□□ -1.56
HMGB3P22-202ENST00000451823 PRDM10Q9NQV6 1147 aa5.29□□□□□ -1.56
HMGB3P22-202ENST00000451823 GTF2IRD1Q9UHL9 959 aa5.29□□□□□ -1.56
HMGB3P22-202ENST00000451823 RAPGEF6Q8TEU7 1601 aa5.29□□□□□ -1.56
HMGB3P22-202ENST00000451823 TROQ12816 1431 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P22-202ENST00000451823 TDRD9Q8NDG6 1382 aaKnown RBP5.29□□□□□ -1.56
HMGB3P22-202ENST00000451823 PLEKHH1Q9ULM0 1364 aa5.29□□□□□ -1.56
HMGB3P22-202ENST00000451823 CDC42BPAQ5VT25 1732 aa5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 ZNF644Q9H582 1327 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 RNF17Q9BXT8 1623 aaKnown RBP5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 PNMA6FA0A0J9YX94 578 aa5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 IGF2BP3O00425 579 aaKnown RBP eCLIP5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 PAGE1O75459 146 aa5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 IKZF1Q13422 519 aa5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 L1TD1Q5T7N2 865 aaKnown RBP5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 UBE3DQ7Z6J8 389 aa5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 RETREG2Q8NC44 543 aa5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 ASB11Q8WXH4 323 aa5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 TESK2Q96S53 571 aa5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 CARD11Q9BXL7 1154 aa5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 KRTAP4-7Q9BYR0 210 aa5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 CACNA2D2Q9NY47 1150 aa5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 POGKQ9P215 609 aa5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 DCTN4Q9UJW0 460 aa5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 PCDHA4Q9UN74 947 aa5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 NUP160Q12769 1436 aa5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 ANKRD50Q9ULJ7 1429 aa5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 PLXNC1O60486 1568 aa5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 ANKRD30AQ9BXX3 1397 aa5.28□□□□□ -1.56
HMGB3P22-202ENST00000451823 SYNJ2O15056 1496 aa5.27□□□□□ -1.57
HMGB3P22-202ENST00000451823 LRRC10BA6NIK2 292 aa5.27□□□□□ -1.57
HMGB3P22-202ENST00000451823 RRP9O43818 475 aaKnown RBP5.27□□□□□ -1.57
HMGB3P22-202ENST00000451823 PIK3C2GO75747 1445 aa5.27□□□□□ -1.57
HMGB3P22-202ENST00000451823 MAPK1P28482 360 aa5.27□□□□□ -1.57
HMGB3P22-202ENST00000451823 RING1Q06587 406 aa5.27□□□□□ -1.57
HMGB3P22-202ENST00000451823 ARHGEF5Q12774 1597 aa5.27□□□□□ -1.57
HMGB3P22-202ENST00000451823 ENOX2Q16206 610 aaKnown RBP5.27□□□□□ -1.57
HMGB3P22-202ENST00000451823 PKN1Q16512 942 aa5.27□□□□□ -1.57
HMGB3P22-202ENST00000451823 NKPD1Q17RQ9 610 aa5.27□□□□□ -1.57
HMGB3P22-202ENST00000451823 C3orf58Q8NDZ4 430 aa5.27□□□□□ -1.57
HMGB3P22-202ENST00000451823 SLC38A3Q99624 504 aa5.27□□□□□ -1.57
HMGB3P22-202ENST00000451823 SAMM50Q9Y512 469 aa5.27□□□□□ -1.57
HMGB3P22-202ENST00000451823 NPC1L1Q9UHC9 1359 aa5.27□□□□□ -1.57
HMGB3P22-202ENST00000451823 EIF2AK4Q9P2K8 1649 aaKnown RBP5.26□□□□□ -1.57
HMGB3P22-202ENST00000451823 ATP10AO60312 1499 aa5.26□□□□□ -1.57
HMGB3P22-202ENST00000451823 MRC2Q9UBG0 1479 aa5.26□□□□□ -1.57
HMGB3P22-202ENST00000451823 CNTNAP4Q9C0A0 1308 aa5.26□□□□□ -1.57
HMGB3P22-202ENST00000451823 CENPJQ9HC77 1338 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P22-202ENST00000451823 RTEL1-TNFRSF6BF6WH68 1400 aa5.26□□□□□ -1.57
HMGB3P22-202ENST00000451823 SCAPERQ9BY12 1400 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms