RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 ABCB5Q2M3G0 1257 aa20.95■□□□□ 0.94
HLCS-205ENST00000448340 OTUD7BQ6GQQ9 843 aa20.95■□□□□ 0.94
HLCS-205ENST00000448340 STK11IPQ8N1F8 1099 aa20.95■□□□□ 0.94
HLCS-205ENST00000448340 REC8O95072 547 aa20.94■□□□□ 0.94
HLCS-205ENST00000448340 PTPRAP18433 802 aa20.94■□□□□ 0.94
HLCS-205ENST00000448340 PPATQ06203 517 aa20.94■□□□□ 0.94
HLCS-205ENST00000448340 ZNF444Q8N0Y2 327 aaPredicted RBP20.94■□□□□ 0.94
HLCS-205ENST00000448340 OPTNQ96CV9 577 aa20.94■□□□□ 0.94
HLCS-205ENST00000448340 RNF41Q9H4P4 317 aaPredicted RBP20.94■□□□□ 0.94
HLCS-205ENST00000448340 CABP5Q9NP86 173 aa20.94■□□□□ 0.94
HLCS-205ENST00000448340 ZBTB21Q9ULJ3 1066 aa20.94■□□□□ 0.94
HLCS-205ENST00000448340 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.94■□□□□ 0.94
HLCS-205ENST00000448340 RBM8AQ9Y5S9 174 aaKnown RBP20.94■□□□□ 0.94
HLCS-205ENST00000448340 GH2P01242 217 aa20.93■□□□□ 0.94
HLCS-205ENST00000448340 RASA1P20936 1047 aa20.93■□□□□ 0.94
HLCS-205ENST00000448340 JAG1P78504 1218 aa20.93■□□□□ 0.94
HLCS-205ENST00000448340 AKNAD1Q5T1N1 836 aa20.93■□□□□ 0.94
HLCS-205ENST00000448340 STAG1Q8WVM7 1258 aa20.93■□□□□ 0.94
HLCS-205ENST00000448340 ZNF333Q96JL9 665 aa20.93■□□□□ 0.94
HLCS-205ENST00000448340 TBC1D2Q9BYX2 928 aa20.93■□□□□ 0.94
HLCS-205ENST00000448340 NBPF3Q9H094 633 aa20.93■□□□□ 0.94
HLCS-205ENST00000448340 ORC4O43929 436 aa20.92■□□□□ 0.94
HLCS-205ENST00000448340 EIF5BO60841 1220 aaKnown RBP20.92■□□□□ 0.94
HLCS-205ENST00000448340 PRDM1O75626 825 aa20.92■□□□□ 0.94
HLCS-205ENST00000448340 AKR1B1P15121 316 aa20.92■□□□□ 0.94
HLCS-205ENST00000448340 PPIL2Q13356 520 aa20.92■□□□□ 0.94
HLCS-205ENST00000448340 MFSD6Q6ZSS7 791 aa20.92■□□□□ 0.94
HLCS-205ENST00000448340 TMEM179Q6ZVK1 233 aa20.92■□□□□ 0.94
HLCS-205ENST00000448340 CNKSR2Q8WXI2 1034 aa20.92■□□□□ 0.94
HLCS-205ENST00000448340 BRI3BPQ8WY22 251 aa20.92■□□□□ 0.94
HLCS-205ENST00000448340 OTUD5Q96G74 571 aa20.92■□□□□ 0.94
HLCS-205ENST00000448340 ZHX2Q9Y6X8 837 aa20.92■□□□□ 0.94
HLCS-205ENST00000448340 USP17L5A8MUK1 530 aa20.91■□□□□ 0.94
HLCS-205ENST00000448340 MPHOSPH10O00566 681 aaKnown RBP20.91■□□□□ 0.94
HLCS-205ENST00000448340 EPB41L2O43491 1005 aaKnown RBP20.91■□□□□ 0.94
HLCS-205ENST00000448340 CYP21A2P08686 494 aa20.91■□□□□ 0.94
HLCS-205ENST00000448340 NT5C2P49902 561 aa20.91■□□□□ 0.94
HLCS-205ENST00000448340 NECTIN1Q15223 517 aa20.91■□□□□ 0.94
HLCS-205ENST00000448340 SHROOM1Q2M3G4 852 aaPredicted RBP20.91■□□□□ 0.94
HLCS-205ENST00000448340 TBC1D10CQ8IV04 446 aa20.91■□□□□ 0.94
HLCS-205ENST00000448340 INCENPQ9NQS7 918 aa20.91■□□□□ 0.94
HLCS-205ENST00000448340 TACC3Q9Y6A5 838 aa20.91■□□□□ 0.94
HLCS-205ENST00000448340 RBBP6Q7Z6E9 1792 aaKnown RBP20.9■□□□□ 0.94
HLCS-205ENST00000448340 GUCY1A2P33402 732 aa20.9■□□□□ 0.94
HLCS-205ENST00000448340 FXR1P51114 621 aaKnown RBP eCLIP20.9■□□□□ 0.94
HLCS-205ENST00000448340 WDR18Q9BV38 432 aa20.9■□□□□ 0.94
HLCS-205ENST00000448340 AS3MTQ9HBK9 375 aa20.9■□□□□ 0.94
HLCS-205ENST00000448340 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.9■□□□□ 0.94
HLCS-205ENST00000448340 AFG3L2Q9Y4W6 797 aa20.9■□□□□ 0.94
HLCS-205ENST00000448340 PHIPQ8WWQ0 1821 aa20.9■□□□□ 0.94
HLCS-205ENST00000448340 IRF6O14896 467 aa20.89■□□□□ 0.93
HLCS-205ENST00000448340 RAB3GAP1Q15042 981 aa20.89■□□□□ 0.93
HLCS-205ENST00000448340 TOMM22Q9NS69 142 aa20.89■□□□□ 0.93
HLCS-205ENST00000448340 CXCL11O14625 94 aa20.88■□□□□ 0.93
HLCS-205ENST00000448340 RANBP6O60518 1105 aaKnown RBP20.88■□□□□ 0.93
HLCS-205ENST00000448340 TSPY3P0CV98 308 aa20.88■□□□□ 0.93
HLCS-205ENST00000448340 TSPY8P0CW00 308 aa20.88■□□□□ 0.93
HLCS-205ENST00000448340 TFAP4Q01664 338 aa20.88■□□□□ 0.93
HLCS-205ENST00000448340 SEPT2Q15019 361 aa20.88■□□□□ 0.93
HLCS-205ENST00000448340 RRP12Q5JTH9 1297 aaKnown RBP20.88■□□□□ 0.93
HLCS-205ENST00000448340 RNF20Q5VTR2 975 aa20.88■□□□□ 0.93
HLCS-205ENST00000448340 CREB3L3Q68CJ9 461 aa20.88■□□□□ 0.93
HLCS-205ENST00000448340 CCDC84Q86UT8 332 aaPredicted RBP20.88■□□□□ 0.93
HLCS-205ENST00000448340 ZNF280CQ8ND82 737 aa20.88■□□□□ 0.93
HLCS-205ENST00000448340 NEDD1Q8NHV4 660 aa20.88■□□□□ 0.93
HLCS-205ENST00000448340 KCNH4Q9UQ05 1017 aa20.88■□□□□ 0.93
HLCS-205ENST00000448340 GREB1LQ9C091 1923 aaPredicted RBP20.87■□□□□ 0.93
HLCS-205ENST00000448340 TSPY2A6NKD2 308 aa20.87■□□□□ 0.93
HLCS-205ENST00000448340 SLC27A2O14975 620 aa20.87■□□□□ 0.93
HLCS-205ENST00000448340 GTF2A2P52657 109 aa20.87■□□□□ 0.93
HLCS-205ENST00000448340 SNAPC2Q13487 334 aa20.87■□□□□ 0.93
HLCS-205ENST00000448340 FAM47AQ5JRC9 791 aa20.87■□□□□ 0.93
HLCS-205ENST00000448340 FAM43AQ8N2R8 423 aa20.87■□□□□ 0.93
HLCS-205ENST00000448340 ESR2Q92731 530 aa20.87■□□□□ 0.93
HLCS-205ENST00000448340 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.87■□□□□ 0.93
HLCS-205ENST00000448340 KRT23Q9C075 422 aa20.87■□□□□ 0.93
HLCS-205ENST00000448340 CNNM2Q9H8M5 875 aa20.87■□□□□ 0.93
HLCS-205ENST00000448340 KANSL2Q9H9L4 492 aa20.87■□□□□ 0.93
HLCS-205ENST00000448340 PTCH2Q9Y6C5 1203 aa20.87■□□□□ 0.93
HLCS-205ENST00000448340 PLIN4Q96Q06 1357 aa20.86■□□□□ 0.93
HLCS-205ENST00000448340 NEDD4P46934 1319 aa20.86■□□□□ 0.93
HLCS-205ENST00000448340 IGKV6D-41A0A0C4DH26 115 aa20.86■□□□□ 0.93
HLCS-205ENST00000448340 SPP2Q13103 211 aa20.86■□□□□ 0.93
HLCS-205ENST00000448340 C8orf34Q49A92 452 aa20.86■□□□□ 0.93
HLCS-205ENST00000448340 USP26Q9BXU7 913 aa20.86■□□□□ 0.93
HLCS-205ENST00000448340 ZFYVE28Q9HCC9 887 aa20.86■□□□□ 0.93
HLCS-205ENST00000448340 CCL15-CCL14A0A0B4J2E2 113 aa20.85■□□□□ 0.93
HLCS-205ENST00000448340 TRIM75PA6NK02 468 aa20.85■□□□□ 0.93
HLCS-205ENST00000448340 E7EWF7 191 aa20.85■□□□□ 0.93
HLCS-205ENST00000448340 HSPA4P34932 840 aa20.85■□□□□ 0.93
HLCS-205ENST00000448340 TRDNQ13061 729 aa20.85■□□□□ 0.93
HLCS-205ENST00000448340 TAF1CQ15572 869 aaPredicted RBP20.85■□□□□ 0.93
HLCS-205ENST00000448340 CCL15Q16663 113 aa20.85■□□□□ 0.93
HLCS-205ENST00000448340 TMEM106CQ9BVX2 250 aa20.85■□□□□ 0.93
HLCS-205ENST00000448340 A0A0G2JLL6 359 aaPredicted RBP20.84■□□□□ 0.93
HLCS-205ENST00000448340 USP17L10C9JJH3 530 aa20.84■□□□□ 0.93
HLCS-205ENST00000448340 CETPP11597 493 aa20.84■□□□□ 0.93
HLCS-205ENST00000448340 BACE1P56817 501 aa20.84■□□□□ 0.93
HLCS-205ENST00000448340 ICA1Q05084 483 aa20.84■□□□□ 0.93
HLCS-205ENST00000448340 TSGA10IPQ3SY00 556 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms