RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 LLPHQ9BRT6 129 aaKnown RBP29.06■■■□□ 2.24
RFFL-206ENST00000447669 PGAP2Q9UHJ9 254 aa29.06■■■□□ 2.24
RFFL-206ENST00000447669 FKBP1CQ5VVH2 108 aa29.06■■■□□ 2.24
RFFL-206ENST00000447669 LARP1BQ659C4 914 aaKnown RBP29.06■■■□□ 2.24
RFFL-206ENST00000447669 DGKHQ86XP1 1220 aa29.06■■■□□ 2.24
RFFL-206ENST00000447669 NUCB2P80303 420 aa29.05■■■□□ 2.24
RFFL-206ENST00000447669 NTRK3Q16288 839 aa29.05■■■□□ 2.24
RFFL-206ENST00000447669 RTN1Q16799 776 aa29.05■■■□□ 2.24
RFFL-206ENST00000447669 CERKLQ49MI3 558 aaPredicted RBP29.05■■■□□ 2.24
RFFL-206ENST00000447669 ANGEL2Q5VTE6 544 aaKnown RBP29.05■■■□□ 2.24
RFFL-206ENST00000447669 FAM83AQ86UY5 434 aa29.05■■■□□ 2.24
RFFL-206ENST00000447669 KAT14Q9H8E8 782 aa29.05■■■□□ 2.24
RFFL-206ENST00000447669 POLR2AP24928 1970 aaKnown RBP29.05■■■□□ 2.24
RFFL-206ENST00000447669 PRAMEF18Q5VWM3 479 aa29.04■■■□□ 2.24
RFFL-206ENST00000447669 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.04■■■□□ 2.24
RFFL-206ENST00000447669 BAZ2BQ9UIF8 2168 aaKnown RBP29.04■■■□□ 2.24
RFFL-206ENST00000447669 STX6O43752 255 aa29.04■■■□□ 2.24
RFFL-206ENST00000447669 BRD1O95696 1058 aa29.04■■■□□ 2.24
RFFL-206ENST00000447669 MMP14P50281 582 aa29.04■■■□□ 2.24
RFFL-206ENST00000447669 FOXD4L6Q3SYB3 417 aaPredicted RBP29.04■■■□□ 2.24
RFFL-206ENST00000447669 TATDN1Q6P1N9 297 aa29.04■■■□□ 2.24
RFFL-206ENST00000447669 FOXD4L3Q6VB84 417 aaPredicted RBP29.04■■■□□ 2.24
RFFL-206ENST00000447669 METTL16Q86W50 562 aaKnown RBP29.04■■■□□ 2.24
RFFL-206ENST00000447669 PNMA1Q8ND90 353 aa29.04■■■□□ 2.24
RFFL-206ENST00000447669 COL2A1P02458 1487 aaPredicted RBP29.03■■■□□ 2.24
RFFL-206ENST00000447669 VPS37CA5D8V6 355 aaPredicted RBP29.03■■■□□ 2.24
RFFL-206ENST00000447669 FAM184AQ8NB25 1140 aa29.03■■■□□ 2.24
RFFL-206ENST00000447669 ANKS1AQ92625 1134 aa29.03■■■□□ 2.24
RFFL-206ENST00000447669 GJB4Q9NTQ9 266 aa29.03■■■□□ 2.24
RFFL-206ENST00000447669 MTMR4Q9NYA4 1195 aa29.03■■■□□ 2.24
RFFL-206ENST00000447669 IGKV6D-41A0A0C4DH26 115 aa29.02■■■□□ 2.24
RFFL-206ENST00000447669 DHX16O60231 1041 aaKnown RBP29.02■■■□□ 2.24
RFFL-206ENST00000447669 PLEKHA8P1O95397 391 aa29.02■■■□□ 2.24
RFFL-206ENST00000447669 TEPSINQ96N21 525 aa29.02■■■□□ 2.24
RFFL-206ENST00000447669 AIFM3Q96NN9 605 aa29.02■■■□□ 2.24
RFFL-206ENST00000447669 DEFB129Q9H1M3 183 aa29.01■■■□□ 2.24
RFFL-206ENST00000447669 ORC3Q9UBD5 711 aaPredicted RBP29.01■■■□□ 2.24
RFFL-206ENST00000447669 GRIN3BO60391 1043 aa29.01■■■□□ 2.23
RFFL-206ENST00000447669 ATP2B2Q01814 1243 aa29.01■■■□□ 2.23
RFFL-206ENST00000447669 DLK2Q6UY11 383 aa29.01■■■□□ 2.23
RFFL-206ENST00000447669 CDC37L1Q7L3B6 337 aa29.01■■■□□ 2.23
RFFL-206ENST00000447669 LRRC47Q8N1G4 583 aaKnown RBP29.01■■■□□ 2.23
RFFL-206ENST00000447669 GGA3Q9NZ52 723 aa29.01■■■□□ 2.23
RFFL-206ENST00000447669 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.01■■■□□ 2.23
RFFL-206ENST00000447669 CLIP2Q9UDT6 1046 aa29.01■■■□□ 2.23
RFFL-206ENST00000447669 MTMR6Q9Y217 621 aa29.01■■■□□ 2.23
RFFL-206ENST00000447669 PLIN4Q96Q06 1357 aa29.01■■■□□ 2.23
RFFL-206ENST00000447669 NID2Q14112 1375 aa29■■■□□ 2.23
RFFL-206ENST00000447669 GREB1LQ9C091 1923 aaPredicted RBP29■■■□□ 2.23
RFFL-206ENST00000447669 GUCY1A2P33402 732 aa28.99■■■□□ 2.23
RFFL-206ENST00000447669 TNNI2P48788 182 aa28.99■■■□□ 2.23
RFFL-206ENST00000447669 GUCY1B3Q02153 619 aa28.99■■■□□ 2.23
RFFL-206ENST00000447669 SEPT2Q15019 361 aa28.99■■■□□ 2.23
RFFL-206ENST00000447669 NFKBIBQ15653 356 aa28.99■■■□□ 2.23
RFFL-206ENST00000447669 OTUD7BQ6GQQ9 843 aa28.99■■■□□ 2.23
RFFL-206ENST00000447669 SLC26A6Q9BXS9 759 aa28.99■■■□□ 2.23
RFFL-206ENST00000447669 hCG_1642624A0A1W2PR95 340 aa28.99■■■□□ 2.23
RFFL-206ENST00000447669 DDAH1O94760 285 aa28.99■■■□□ 2.23
RFFL-206ENST00000447669 NT5C2P49902 561 aa28.99■■■□□ 2.23
RFFL-206ENST00000447669 HMGN5P82970 282 aaKnown RBP28.99■■■□□ 2.23
RFFL-206ENST00000447669 NBR1Q14596 966 aa28.99■■■□□ 2.23
RFFL-206ENST00000447669 STAG2Q8N3U4 1231 aa28.99■■■□□ 2.23
RFFL-206ENST00000447669 GH2P01242 217 aa28.98■■■□□ 2.23
RFFL-206ENST00000447669 LMOD1P29536 600 aaPredicted RBP28.98■■■□□ 2.23
RFFL-206ENST00000447669 CCDC178Q5BJE1 867 aa28.98■■■□□ 2.23
RFFL-206ENST00000447669 HERC5Q9UII4 1024 aaKnown RBP28.98■■■□□ 2.23
RFFL-206ENST00000447669 GOLGA8HP0CJ92 632 aa28.98■■■□□ 2.23
RFFL-206ENST00000447669 NOVP48745 357 aa28.98■■■□□ 2.23
RFFL-206ENST00000447669 TNFAIP1Q13829 316 aa28.98■■■□□ 2.23
RFFL-206ENST00000447669 ABCB5Q2M3G0 1257 aa28.98■■■□□ 2.23
RFFL-206ENST00000447669 NBPF12Q5TAG4 269 aaPredicted RBP28.98■■■□□ 2.23
RFFL-206ENST00000447669 DPY19L2Q6NUT2 758 aa28.98■■■□□ 2.23
RFFL-206ENST00000447669 NBPF11Q86T75 865 aa28.98■■■□□ 2.23
RFFL-206ENST00000447669 FERMT3Q86UX7 667 aa28.98■■■□□ 2.23
RFFL-206ENST00000447669 CCDC17Q96LX7 622 aa28.98■■■□□ 2.23
RFFL-206ENST00000447669 FZD1Q9UP38 647 aa28.98■■■□□ 2.23
RFFL-206ENST00000447669 MYH4Q9Y623 1939 aa28.98■■■□□ 2.23
RFFL-206ENST00000447669 ZSCAN22P10073 491 aaPredicted RBP28.97■■■□□ 2.23
RFFL-206ENST00000447669 WDR33Q9C0J8 1336 aaKnown RBP28.97■■■□□ 2.23
RFFL-206ENST00000447669 TOP1P11387 765 aaKnown RBP28.96■■■□□ 2.23
RFFL-206ENST00000447669 IFNAR1P17181 557 aa28.96■■■□□ 2.23
RFFL-206ENST00000447669 RCAN1P53805 252 aa28.96■■■□□ 2.23
RFFL-206ENST00000447669 SIAH1Q8IUQ4 282 aa28.96■■■□□ 2.23
RFFL-206ENST00000447669 SRBD1Q8N5C6 995 aaKnown RBP28.96■■■□□ 2.23
RFFL-206ENST00000447669 CTCFLQ8NI51 663 aaPredicted RBP28.96■■■□□ 2.23
RFFL-206ENST00000447669 PIBF1Q8WXW3 757 aa28.96■■■□□ 2.23
RFFL-206ENST00000447669 CPVLQ9H3G5 476 aa28.96■■■□□ 2.23
RFFL-206ENST00000447669 TTLL1O95922 423 aa28.95■■■□□ 2.23
RFFL-206ENST00000447669 CALM1P0DP23 149 aa28.95■■■□□ 2.23
RFFL-206ENST00000447669 CALM2P0DP24 149 aa28.95■■■□□ 2.23
RFFL-206ENST00000447669 CALM3P0DP25 149 aa28.95■■■□□ 2.23
RFFL-206ENST00000447669 CPLX2Q6PUV4 134 aaKnown RBP28.95■■■□□ 2.23
RFFL-206ENST00000447669 USP17L2Q6R6M4 530 aa28.95■■■□□ 2.23
RFFL-206ENST00000447669 ADARB2Q9NS39 739 aaKnown RBP28.95■■■□□ 2.23
RFFL-206ENST00000447669 EEF2P13639 858 aaKnown RBP28.94■■■□□ 2.22
RFFL-206ENST00000447669 FUT2Q10981 343 aa28.94■■■□□ 2.22
RFFL-206ENST00000447669 MAD2L2Q9UI95 211 aa28.94■■■□□ 2.22
RFFL-206ENST00000447669 CCDC196A0A1B0GTZ2 297 aa28.94■■■□□ 2.22
RFFL-206ENST00000447669 USP17L5A8MUK1 530 aa28.94■■■□□ 2.22
RFFL-206ENST00000447669 CDKL5O76039 1030 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms