RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 NEUROD1Q13562 356 aa4.38□□□□□ -1.71
PMS1-215ENST00000447232 IRF5Q13568 498 aa4.38□□□□□ -1.71
PMS1-215ENST00000447232 NBPF12Q5TAG4 269 aaPredicted RBP4.38□□□□□ -1.71
PMS1-215ENST00000447232 MTMR14Q8NCE2 650 aa4.38□□□□□ -1.71
PMS1-215ENST00000447232 NANOS1Q8WY41 292 aaKnown RBP4.38□□□□□ -1.71
PMS1-215ENST00000447232 MXD3Q9BW11 206 aa4.38□□□□□ -1.71
PMS1-215ENST00000447232 CPA4Q9UI42 421 aa4.38□□□□□ -1.71
PMS1-215ENST00000447232 TCF20Q9UGU0 1960 aaKnown RBP4.38□□□□□ -1.71
PMS1-215ENST00000447232 MAST2Q6P0Q8 1798 aa4.37□□□□□ -1.71
PMS1-215ENST00000447232 UFL1O94874 794 aa4.37□□□□□ -1.71
PMS1-215ENST00000447232 COL6A1P12109 1028 aa4.37□□□□□ -1.71
PMS1-215ENST00000447232 NHLH1Q02575 133 aa4.37□□□□□ -1.71
PMS1-215ENST00000447232 GRIN2CQ14957 1233 aa4.37□□□□□ -1.71
PMS1-215ENST00000447232 SF3B3Q15393 1217 aaKnown RBP4.37□□□□□ -1.71
PMS1-215ENST00000447232 GAS2L2Q8NHY3 880 aa4.37□□□□□ -1.71
PMS1-215ENST00000447232 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.37□□□□□ -1.71
PMS1-215ENST00000447232 ZDBF2Q9HCK1 2354 aa4.37□□□□□ -1.71
PMS1-215ENST00000447232 XIRP2A4UGR9 3374 aa4.37□□□□□ -1.71
PMS1-215ENST00000447232 SH3TC1Q8TE82 1336 aa4.37□□□□□ -1.71
PMS1-215ENST00000447232 CETPP11597 493 aa4.37□□□□□ -1.71
PMS1-215ENST00000447232 VGLL4Q14135 290 aa4.37□□□□□ -1.71
PMS1-215ENST00000447232 SHHQ15465 462 aa4.37□□□□□ -1.71
PMS1-215ENST00000447232 AKNAD1Q5T1N1 836 aa4.37□□□□□ -1.71
PMS1-215ENST00000447232 LRP10Q7Z4F1 713 aa4.37□□□□□ -1.71
PMS1-215ENST00000447232 NLRP10Q86W26 655 aa4.37□□□□□ -1.71
PMS1-215ENST00000447232 RNF217Q8TC41 542 aa4.37□□□□□ -1.71
PMS1-215ENST00000447232 GGA1Q9UJY5 639 aa4.37□□□□□ -1.71
PMS1-215ENST00000447232 OGDHLQ9ULD0 1010 aa4.37□□□□□ -1.71
PMS1-215ENST00000447232 DNAH12Q6ZR08 3092 aa4.37□□□□□ -1.71
PMS1-215ENST00000447232 CFAP54Q96N23 3096 aa4.37□□□□□ -1.71
PMS1-215ENST00000447232 ZBBXA8MT70 800 aa4.36□□□□□ -1.71
PMS1-215ENST00000447232 ADH1AP07327 375 aa4.36□□□□□ -1.71
PMS1-215ENST00000447232 FBXO45P0C2W1 286 aa4.36□□□□□ -1.71
PMS1-215ENST00000447232 BCRP11274 1271 aa4.36□□□□□ -1.71
PMS1-215ENST00000447232 FLT3LGP49771 235 aa4.36□□□□□ -1.71
PMS1-215ENST00000447232 FCGRTP55899 365 aa4.36□□□□□ -1.71
PMS1-215ENST00000447232 LRRC26Q2I0M4 334 aa4.36□□□□□ -1.71
PMS1-215ENST00000447232 C9orf50Q5SZB4 431 aa4.36□□□□□ -1.71
PMS1-215ENST00000447232 STRIP1Q5VSL9 837 aa4.36□□□□□ -1.71
PMS1-215ENST00000447232 POLMQ9NP87 494 aaPredicted RBP4.36□□□□□ -1.71
PMS1-215ENST00000447232 PKD1L2Q7Z442 2459 aa4.36□□□□□ -1.71
PMS1-215ENST00000447232 PTGIRP43119 386 aa4.36□□□□□ -1.71
PMS1-215ENST00000447232 RPS8P62241 208 aaKnown RBP4.36□□□□□ -1.71
PMS1-215ENST00000447232 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.36□□□□□ -1.71
PMS1-215ENST00000447232 WDFY4Q6ZS81 3184 aa4.36□□□□□ -1.71
PMS1-215ENST00000447232 USP34Q70CQ2 3546 aa4.36□□□□□ -1.71
PMS1-215ENST00000447232 REV3LO60673 3130 aa4.36□□□□□ -1.71
PMS1-215ENST00000447232 CACNA1BQ00975 2339 aa4.36□□□□□ -1.71
PMS1-215ENST00000447232 ITGA6P23229 1130 aa4.35□□□□□ -1.71
PMS1-215ENST00000447232 ANKRD23Q86SG2 305 aa4.35□□□□□ -1.71
PMS1-215ENST00000447232 CNTNAP3BQ96NU0 1288 aa4.35□□□□□ -1.71
PMS1-215ENST00000447232 LBHD1Q9BQE6 289 aaPredicted RBP4.35□□□□□ -1.71
PMS1-215ENST00000447232 CNTNAP3Q9BZ76 1288 aa4.35□□□□□ -1.71
PMS1-215ENST00000447232 TRMT112Q9UI30 125 aaKnown RBP4.35□□□□□ -1.71
PMS1-215ENST00000447232 RRP7AQ9Y3A4 280 aaKnown RBP4.35□□□□□ -1.71
PMS1-215ENST00000447232 DOCK3Q8IZD9 2030 aa4.35□□□□□ -1.71
PMS1-215ENST00000447232 CACNA1GO43497 2377 aa4.35□□□□□ -1.71
PMS1-215ENST00000447232 SMIM22K7EJ46 135 aa4.35□□□□□ -1.71
PMS1-215ENST00000447232 MYL6BP14649 208 aa4.35□□□□□ -1.71
PMS1-215ENST00000447232 SNAPC2Q13487 334 aa4.35□□□□□ -1.71
PMS1-215ENST00000447232 RNFT1Q5M7Z0 435 aa4.35□□□□□ -1.71
PMS1-215ENST00000447232 FOXD4L5Q5VV16 416 aaPredicted RBP4.35□□□□□ -1.71
PMS1-215ENST00000447232 KIAA0825Q8IV33 1275 aa4.35□□□□□ -1.71
PMS1-215ENST00000447232 TEPSINQ96N21 525 aa4.35□□□□□ -1.71
PMS1-215ENST00000447232 KRTAP17-1Q9BYP8 105 aa4.35□□□□□ -1.71
PMS1-215ENST00000447232 CYLDQ9NQC7 956 aa4.35□□□□□ -1.71
PMS1-215ENST00000447232 CXXC1Q9P0U4 656 aaPredicted RBP4.35□□□□□ -1.71
PMS1-215ENST00000447232 ANKIB1Q9P2G1 1089 aa4.35□□□□□ -1.71
PMS1-215ENST00000447232 SNCAIPQ9Y6H5 919 aa4.35□□□□□ -1.71
PMS1-215ENST00000447232 AOX1Q06278 1338 aa4.35□□□□□ -1.71
PMS1-215ENST00000447232 ARAP2Q8WZ64 1704 aa4.34□□□□□ -1.71
PMS1-215ENST00000447232 CHD9Q3L8U1 2897 aa4.34□□□□□ -1.71
PMS1-215ENST00000447232 BAHCC1Q9P281 2608 aa4.34□□□□□ -1.71
PMS1-215ENST00000447232 MED23Q9ULK4 1368 aa4.34□□□□□ -1.71
PMS1-215ENST00000447232 FAM86C2PA6NEL3 165 aa4.34□□□□□ -1.71
PMS1-215ENST00000447232 RASA3Q14644 834 aa4.34□□□□□ -1.71
PMS1-215ENST00000447232 MORC1Q86VD1 984 aa4.34□□□□□ -1.71
PMS1-215ENST00000447232 ERO1BQ86YB8 467 aa4.34□□□□□ -1.71
PMS1-215ENST00000447232 VWA5B2Q8N398 1253 aa4.34□□□□□ -1.71
PMS1-215ENST00000447232 KCNH6Q9H252 994 aa4.34□□□□□ -1.71
PMS1-215ENST00000447232 PCDHAC2Q9Y5I4 1007 aa4.34□□□□□ -1.71
PMS1-215ENST00000447232 SPTBN4Q9H254 2564 aa4.34□□□□□ -1.71
PMS1-215ENST00000447232 PRR33A8MZF0 331 aa4.34□□□□□ -1.72
PMS1-215ENST00000447232 PDHXO00330 501 aa4.34□□□□□ -1.72
PMS1-215ENST00000447232 PPIL2Q13356 520 aa4.34□□□□□ -1.72
PMS1-215ENST00000447232 MOGSQ13724 837 aa4.34□□□□□ -1.72
PMS1-215ENST00000447232 DLGAP5Q15398 846 aa4.34□□□□□ -1.72
PMS1-215ENST00000447232 HSP90AB3PQ58FF7 597 aa4.34□□□□□ -1.72
PMS1-215ENST00000447232 ZBTB38Q8NAP3 1195 aaPredicted RBP4.34□□□□□ -1.72
PMS1-215ENST00000447232 PPM1EQ8WY54 764 aa4.34□□□□□ -1.72
PMS1-215ENST00000447232 PCDHB9Q9Y5E1 797 aa4.34□□□□□ -1.72
PMS1-215ENST00000447232 CSADQ9Y600 493 aa4.34□□□□□ -1.72
PMS1-215ENST00000447232 XDHP47989 1333 aa4.34□□□□□ -1.72
PMS1-215ENST00000447232 KMT2BQ9UMN6 2715 aaPredicted RBP4.33□□□□□ -1.72
PMS1-215ENST00000447232 CLRN2A0PK11 232 aa4.33□□□□□ -1.72
PMS1-215ENST00000447232 PI4K2BG5E9Z4 385 aa4.33□□□□□ -1.72
PMS1-215ENST00000447232 HMGCRP04035 888 aa4.33□□□□□ -1.72
PMS1-215ENST00000447232 U2AF1L5P0DN76 240 aaPredicted RBP4.33□□□□□ -1.72
PMS1-215ENST00000447232 ATP2B4P23634 1241 aa4.33□□□□□ -1.72
PMS1-215ENST00000447232 U2AF1Q01081 240 aaKnown RBP eCLIP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms