RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 TSPY3P0CV98 308 aa19.32■□□□□ 0.68
LAPTM4B-201ENST00000445593 TSPY8P0CW00 308 aa19.32■□□□□ 0.68
LAPTM4B-201ENST00000445593 NOLC1Q14978 699 aaKnown RBP eCLIP19.32■□□□□ 0.68
LAPTM4B-201ENST00000445593 ZNF827Q17R98 1081 aa19.32■□□□□ 0.68
LAPTM4B-201ENST00000445593 KAT14Q9H8E8 782 aa19.32■□□□□ 0.68
LAPTM4B-201ENST00000445593 A0A1B0GUL6 1792 aa19.32■□□□□ 0.68
LAPTM4B-201ENST00000445593 SMC2O95347 1197 aa19.32■□□□□ 0.68
LAPTM4B-201ENST00000445593 LMOD1P29536 600 aaPredicted RBP19.32■□□□□ 0.68
LAPTM4B-201ENST00000445593 RASGRP4Q8TDF6 673 aa19.32■□□□□ 0.68
LAPTM4B-201ENST00000445593 POLR2DO15514 142 aaKnown RBP19.31■□□□□ 0.68
LAPTM4B-201ENST00000445593 BAG3O95817 575 aa19.31■□□□□ 0.68
LAPTM4B-201ENST00000445593 TEX11Q8IYF3 940 aa19.31■□□□□ 0.68
LAPTM4B-201ENST00000445593 RNF26Q9BY78 433 aaPredicted RBP19.31■□□□□ 0.68
LAPTM4B-201ENST00000445593 TIAM2Q8IVF5 1701 aa19.31■□□□□ 0.68
LAPTM4B-201ENST00000445593 ONECUT3O60422 494 aaPredicted RBP19.31■□□□□ 0.68
LAPTM4B-201ENST00000445593 TMTC3Q6ZXV5 915 aa19.31■□□□□ 0.68
LAPTM4B-201ENST00000445593 TBC1D16Q8TBP0 767 aa19.31■□□□□ 0.68
LAPTM4B-201ENST00000445593 POLRMTO00411 1230 aaKnown RBP19.3■□□□□ 0.68
LAPTM4B-201ENST00000445593 APBA3O96018 575 aa19.3■□□□□ 0.68
LAPTM4B-201ENST00000445593 XBP1P17861 261 aa19.3■□□□□ 0.68
LAPTM4B-201ENST00000445593 IL17RBQ9NRM6 502 aa19.3■□□□□ 0.68
LAPTM4B-201ENST00000445593 DUOX1Q9NRD9 1551 aa19.3■□□□□ 0.68
LAPTM4B-201ENST00000445593 SLURP2P0DP57 97 aa19.3■□□□□ 0.68
LAPTM4B-201ENST00000445593 CASP1P29466 404 aa19.3■□□□□ 0.68
LAPTM4B-201ENST00000445593 NLRP5P59047 1200 aa19.3■□□□□ 0.68
LAPTM4B-201ENST00000445593 FUT2Q10981 343 aa19.3■□□□□ 0.68
LAPTM4B-201ENST00000445593 C12orf60Q5U649 245 aa19.3■□□□□ 0.68
LAPTM4B-201ENST00000445593 PLA2G4DQ86XP0 818 aa19.3■□□□□ 0.68
LAPTM4B-201ENST00000445593 ZNF444Q8N0Y2 327 aaPredicted RBP19.3■□□□□ 0.68
LAPTM4B-201ENST00000445593 TAF1LQ8IZX4 1826 aa19.3■□□□□ 0.68
LAPTM4B-201ENST00000445593 PPP6R2O75170 966 aa19.3■□□□□ 0.68
LAPTM4B-201ENST00000445593 ADRA2BP18089 450 aa19.3■□□□□ 0.68
LAPTM4B-201ENST00000445593 KRT2P35908 639 aa19.3■□□□□ 0.68
LAPTM4B-201ENST00000445593 SCNN1DP51172 638 aa19.3■□□□□ 0.68
LAPTM4B-201ENST00000445593 EIF6P56537 245 aaKnown RBP19.3■□□□□ 0.68
LAPTM4B-201ENST00000445593 RCSD1Q6JBY9 416 aa19.3■□□□□ 0.68
LAPTM4B-201ENST00000445593 PIK3AP1Q6ZUJ8 805 aa19.3■□□□□ 0.68
LAPTM4B-201ENST00000445593 PNMA1Q8ND90 353 aa19.3■□□□□ 0.68
LAPTM4B-201ENST00000445593 RILPL1Q5EBL4 403 aa19.29■□□□□ 0.68
LAPTM4B-201ENST00000445593 AMOTL1Q8IY63 956 aa19.29■□□□□ 0.68
LAPTM4B-201ENST00000445593 STAMQ92783 540 aa19.29■□□□□ 0.68
LAPTM4B-201ENST00000445593 NAT10Q9H0A0 1025 aaKnown RBP19.29■□□□□ 0.68
LAPTM4B-201ENST00000445593 CSRNP2Q9H175 543 aa19.29■□□□□ 0.68
LAPTM4B-201ENST00000445593 FOXP1Q9H334 677 aaPredicted RBP19.29■□□□□ 0.68
LAPTM4B-201ENST00000445593 ECM29Q5VYK3 1845 aa19.29■□□□□ 0.68
LAPTM4B-201ENST00000445593 RESP18Q5W5W9 173 aa19.29■□□□□ 0.68
LAPTM4B-201ENST00000445593 METTL16Q86W50 562 aaKnown RBP19.29■□□□□ 0.68
LAPTM4B-201ENST00000445593 SERTAD1Q9UHV2 236 aa19.29■□□□□ 0.68
LAPTM4B-201ENST00000445593 RGL2O15211 777 aa19.28■□□□□ 0.68
LAPTM4B-201ENST00000445593 PRR29P0C7W0 189 aa19.28■□□□□ 0.68
LAPTM4B-201ENST00000445593 HOMER1Q86YM7 354 aa19.28■□□□□ 0.68
LAPTM4B-201ENST00000445593 EPSTI1Q96J88 318 aa19.28■□□□□ 0.68
LAPTM4B-201ENST00000445593 VAT1LQ9HCJ6 419 aa19.28■□□□□ 0.68
LAPTM4B-201ENST00000445593 CNTNAP5Q8WYK1 1306 aa19.28■□□□□ 0.68
LAPTM4B-201ENST00000445593 ORC4O43929 436 aa19.28■□□□□ 0.68
LAPTM4B-201ENST00000445593 CUTAO60888 179 aa19.28■□□□□ 0.68
LAPTM4B-201ENST00000445593 CLEC10AQ8IUN9 316 aa19.28■□□□□ 0.68
LAPTM4B-201ENST00000445593 ZNF622Q969S3 477 aaKnown RBP eCLIP19.28■□□□□ 0.68
LAPTM4B-201ENST00000445593 DHX58Q96C10 678 aa19.28■□□□□ 0.68
LAPTM4B-201ENST00000445593 AFMP43652 599 aa19.28■□□□□ 0.68
LAPTM4B-201ENST00000445593 CRY2Q49AN0 593 aa19.28■□□□□ 0.68
LAPTM4B-201ENST00000445593 RTFDC1Q9BY42 306 aaPredicted RBP19.28■□□□□ 0.68
LAPTM4B-201ENST00000445593 FBXO2Q9UK22 296 aaPredicted RBP19.28■□□□□ 0.68
LAPTM4B-201ENST00000445593 PCDHA5Q9Y5H7 936 aa19.28■□□□□ 0.68
LAPTM4B-201ENST00000445593 COL24A1Q17RW2 1714 aa19.27■□□□□ 0.68
LAPTM4B-201ENST00000445593 TRIM75PA6NK02 468 aa19.27■□□□□ 0.68
LAPTM4B-201ENST00000445593 G3V3G9 751 aa19.27■□□□□ 0.68
LAPTM4B-201ENST00000445593 PPEF1O14829 653 aaPredicted RBP19.27■□□□□ 0.68
LAPTM4B-201ENST00000445593 ATP1A3P13637 1013 aa19.27■□□□□ 0.68
LAPTM4B-201ENST00000445593 ATP2B4P23634 1241 aa19.27■□□□□ 0.68
LAPTM4B-201ENST00000445593 DCAF8Q5TAQ9 597 aa19.27■□□□□ 0.68
LAPTM4B-201ENST00000445593 COL23A1Q86Y22 540 aaPredicted RBP19.27■□□□□ 0.68
LAPTM4B-201ENST00000445593 FOXP4Q8IVH2 680 aaPredicted RBP19.27■□□□□ 0.68
LAPTM4B-201ENST00000445593 CACTINQ8WUQ7 758 aaKnown RBP19.27■□□□□ 0.68
LAPTM4B-201ENST00000445593 PRPF3O43395 683 aaKnown RBP19.27■□□□□ 0.67
LAPTM4B-201ENST00000445593 MCM7P33993 719 aa19.27■□□□□ 0.67
LAPTM4B-201ENST00000445593 RBM28Q9NW13 759 aaKnown RBP19.27■□□□□ 0.67
LAPTM4B-201ENST00000445593 HPSEQ9Y251 543 aa19.27■□□□□ 0.67
LAPTM4B-201ENST00000445593 SBF2Q86WG5 1849 aa19.27■□□□□ 0.67
LAPTM4B-201ENST00000445593 GSTO1P78417 241 aa19.26■□□□□ 0.67
LAPTM4B-201ENST00000445593 KRBA2Q6ZNG9 492 aa19.26■□□□□ 0.67
LAPTM4B-201ENST00000445593 TSC1Q92574 1164 aa19.26■□□□□ 0.67
LAPTM4B-201ENST00000445593 IFNKQ9P0W0 207 aa19.26■□□□□ 0.67
LAPTM4B-201ENST00000445593 VWA3AA6NCI4 1184 aa19.26■□□□□ 0.67
LAPTM4B-201ENST00000445593 CDC25AP30304 524 aa19.26■□□□□ 0.67
LAPTM4B-201ENST00000445593 PHF20Q9BVI0 1012 aa19.26■□□□□ 0.67
LAPTM4B-201ENST00000445593 DDAH1O94760 285 aa19.26■□□□□ 0.67
LAPTM4B-201ENST00000445593 MMP10P09238 476 aa19.26■□□□□ 0.67
LAPTM4B-201ENST00000445593 FGRP09769 529 aa19.26■□□□□ 0.67
LAPTM4B-201ENST00000445593 NLRP12P59046 1061 aa19.26■□□□□ 0.67
LAPTM4B-201ENST00000445593 DHX37Q8IY37 1157 aaKnown RBP19.26■□□□□ 0.67
LAPTM4B-201ENST00000445593 BRMS1Q9HCU9 246 aa19.26■□□□□ 0.67
LAPTM4B-201ENST00000445593 LDHCP07864 332 aa19.25■□□□□ 0.67
LAPTM4B-201ENST00000445593 CALM1P0DP23 149 aa19.25■□□□□ 0.67
LAPTM4B-201ENST00000445593 CALM2P0DP24 149 aa19.25■□□□□ 0.67
LAPTM4B-201ENST00000445593 CALM3P0DP25 149 aa19.25■□□□□ 0.67
LAPTM4B-201ENST00000445593 SCG2P13521 617 aa19.25■□□□□ 0.67
LAPTM4B-201ENST00000445593 SLC27A3Q5K4L6 730 aa19.25■□□□□ 0.67
LAPTM4B-201ENST00000445593 HEATR3Q7Z4Q2 680 aa19.25■□□□□ 0.67
LAPTM4B-201ENST00000445593 MKRN1Q9UHC7 482 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms