RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 PRKAR2AP13861 404 aaKnown RBP12.34□□□□□ -0.43
HDLBP-219ENST00000442714 BMP8BP34820 402 aa12.34□□□□□ -0.43
HDLBP-219ENST00000442714 USP14P54578 494 aa12.34□□□□□ -0.43
HDLBP-219ENST00000442714 RAB3GAP1Q15042 981 aa12.34□□□□□ -0.43
HDLBP-219ENST00000442714 TTF1Q15361 905 aaPredicted RBP12.34□□□□□ -0.43
HDLBP-219ENST00000442714 LBX2Q6XYB7 198 aa12.34□□□□□ -0.43
HDLBP-219ENST00000442714 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.34□□□□□ -0.439e-7■□□□□ 8.6
HDLBP-219ENST00000442714 SOCS4Q8WXH5 440 aa12.34□□□□□ -0.43
HDLBP-219ENST00000442714 EDC3Q96F86 508 aaKnown RBP12.34□□□□□ -0.43
HDLBP-219ENST00000442714 CABP5Q9NP86 173 aa12.34□□□□□ -0.43
HDLBP-219ENST00000442714 ZBTB40Q9NUA8 1239 aa12.34□□□□□ -0.43
HDLBP-219ENST00000442714 PHIPQ8WWQ0 1821 aa12.34□□□□□ -0.43
HDLBP-219ENST00000442714 TCRBV5S4A2TA0A5A2 114 aa12.33□□□□□ -0.44
HDLBP-219ENST00000442714 IGHA2P01877 340 aa12.33□□□□□ -0.44
HDLBP-219ENST00000442714 PDE6AP16499 860 aa12.33□□□□□ -0.44
HDLBP-219ENST00000442714 RGS2P41220 211 aa12.33□□□□□ -0.44
HDLBP-219ENST00000442714 PDE3AQ14432 1141 aa12.33□□□□□ -0.44
HDLBP-219ENST00000442714 CCL14Q16627 93 aa12.33□□□□□ -0.44
HDLBP-219ENST00000442714 SIAH1Q8IUQ4 282 aa12.33□□□□□ -0.44
HDLBP-219ENST00000442714 CCAR1Q8IX12 1150 aaKnown RBP12.33□□□□□ -0.44
HDLBP-219ENST00000442714 CLASRPQ8N2M8 674 aaKnown RBP12.33□□□□□ -0.44
HDLBP-219ENST00000442714 GDF15Q99988 308 aa12.33□□□□□ -0.44
HDLBP-219ENST00000442714 PAGR1Q9BTK6 254 aa12.33□□□□□ -0.44
HDLBP-219ENST00000442714 C11orf49Q9H6J7 331 aa12.33□□□□□ -0.44
HDLBP-219ENST00000442714 BTBD7Q9P203 1132 aa12.33□□□□□ -0.44
HDLBP-219ENST00000442714 DOCK3Q8IZD9 2030 aa12.33□□□□□ -0.44
HDLBP-219ENST00000442714 A0A1W2PRG0 241 aa12.32□□□□□ -0.44
HDLBP-219ENST00000442714 SLC15A5A6NIM6 579 aa12.32□□□□□ -0.44
HDLBP-219ENST00000442714 POLR3DP05423 398 aaPredicted RBP12.32□□□□□ -0.44
HDLBP-219ENST00000442714 MS4A1P11836 297 aa12.32□□□□□ -0.44
HDLBP-219ENST00000442714 COL6A1P12109 1028 aa12.32□□□□□ -0.44
HDLBP-219ENST00000442714 VCAM1P19320 739 aa12.32□□□□□ -0.44
HDLBP-219ENST00000442714 EVX2Q03828 476 aa12.32□□□□□ -0.44
HDLBP-219ENST00000442714 MAP2K5Q13163 448 aa12.32□□□□□ -0.44
HDLBP-219ENST00000442714 SEPT2Q15019 361 aa12.32□□□□□ -0.44
HDLBP-219ENST00000442714 ZYXQ15942 572 aaKnown RBP12.32□□□□□ -0.44
HDLBP-219ENST00000442714 DIEXFQ68CQ4 756 aaKnown RBP12.32□□□□□ -0.44
HDLBP-219ENST00000442714 KIF1BPQ96EK5 621 aa12.32□□□□□ -0.44
HDLBP-219ENST00000442714 MCM9Q9NXL9 1143 aa12.32□□□□□ -0.44
HDLBP-219ENST00000442714 HOXC10Q9NYD6 342 aa12.32□□□□□ -0.44
HDLBP-219ENST00000442714 LAMA3Q16787 3333 aa12.32□□□□□ -0.44
HDLBP-219ENST00000442714 GOLIM4O00461 696 aa12.31□□□□□ -0.44
HDLBP-219ENST00000442714 SOX1O00570 391 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-219ENST00000442714 RAB11FIP3O75154 756 aa12.31□□□□□ -0.44
HDLBP-219ENST00000442714 GLRX3O76003 335 aaKnown RBP12.31□□□□□ -0.44
HDLBP-219ENST00000442714 HOXC6P09630 235 aa12.31□□□□□ -0.44
HDLBP-219ENST00000442714 ZKSCAN1P17029 563 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-219ENST00000442714 PTPREP23469 700 aa12.31□□□□□ -0.44
HDLBP-219ENST00000442714 CCND3P30281 292 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-219ENST00000442714 CCNA1P78396 465 aa12.31□□□□□ -0.44
HDLBP-219ENST00000442714 COG2Q14746 738 aa12.31□□□□□ -0.44
HDLBP-219ENST00000442714 FEZ1Q99689 392 aa12.31□□□□□ -0.44
HDLBP-219ENST00000442714 CRNKL1Q9BZJ0 848 aaKnown RBP12.31□□□□□ -0.44
HDLBP-219ENST00000442714 RPAP3Q9H6T3 665 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-219ENST00000442714 DCP1AQ9NPI6 582 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-219ENST00000442714 FLRT1Q9NZU1 646 aa12.31□□□□□ -0.44
HDLBP-219ENST00000442714 DOCK2Q92608 1830 aa12.31□□□□□ -0.44
HDLBP-219ENST00000442714 ZBED9Q6R2W3 1325 aa12.31□□□□□ -0.44
HDLBP-219ENST00000442714 ZNF532Q9HCE3 1301 aa12.31□□□□□ -0.44
HDLBP-219ENST00000442714 A0A0C4DFX4 3053 aa12.31□□□□□ -0.44
HDLBP-219ENST00000442714 DOCK1Q14185 1865 aa12.3□□□□□ -0.44
HDLBP-219ENST00000442714 SPDYE16A6NNV3 312 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-219ENST00000442714 APBB1O00213 710 aa12.3□□□□□ -0.44
HDLBP-219ENST00000442714 IFIT2P09913 472 aaKnown RBP12.3□□□□□ -0.44
HDLBP-219ENST00000442714 C7orf61Q8IZ16 206 aa12.3□□□□□ -0.44
HDLBP-219ENST00000442714 APBA2Q99767 749 aa12.3□□□□□ -0.44
HDLBP-219ENST00000442714 ZMYND8Q9ULU4 1186 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-219ENST00000442714 PFASO15067 1338 aa12.3□□□□□ -0.44
HDLBP-219ENST00000442714 PRKAB2O43741 272 aa12.29□□□□□ -0.44
HDLBP-219ENST00000442714 STRNO43815 780 aa12.29□□□□□ -0.44
HDLBP-219ENST00000442714 HMMRO75330 724 aa12.29□□□□□ -0.44
HDLBP-219ENST00000442714 CYP2D6P10635 497 aa12.29□□□□□ -0.44
HDLBP-219ENST00000442714 ATP5JP18859 108 aa12.29□□□□□ -0.44
HDLBP-219ENST00000442714 ATP2B2Q01814 1243 aa12.29□□□□□ -0.44
HDLBP-219ENST00000442714 GRB14Q14449 540 aa12.29□□□□□ -0.44
HDLBP-219ENST00000442714 SLFNL1Q499Z3 407 aa12.29□□□□□ -0.44
HDLBP-219ENST00000442714 KIAA1755Q5JYT7 1200 aa12.29□□□□□ -0.44
HDLBP-219ENST00000442714 LCORLQ8N3X6 602 aa12.29□□□□□ -0.44
HDLBP-219ENST00000442714 SDR42E1Q8WUS8 393 aa12.29□□□□□ -0.44
HDLBP-219ENST00000442714 BOLA2Q9H3K6 86 aa12.29□□□□□ -0.44
HDLBP-219ENST00000442714 DDX19BQ9UMR2 479 aa12.29□□□□□ -0.44
HDLBP-219ENST00000442714 COG6Q9Y2V7 657 aa12.29□□□□□ -0.44
HDLBP-219ENST00000442714 PTPRFP10586 1907 aa12.29□□□□□ -0.44
HDLBP-219ENST00000442714 SYN1P17600 705 aa12.28□□□□□ -0.44
HDLBP-219ENST00000442714 ADD2P35612 726 aa12.28□□□□□ -0.44
HDLBP-219ENST00000442714 MFSD14CQ5VZR4 134 aa12.28□□□□□ -0.44
HDLBP-219ENST00000442714 NPLOC4Q8TAT6 608 aa12.28□□□□□ -0.44
HDLBP-219ENST00000442714 DYNLL2Q96FJ2 89 aa12.28□□□□□ -0.44
HDLBP-219ENST00000442714 LRCH3Q96II8 777 aa12.28□□□□□ -0.44
HDLBP-219ENST00000442714 DNAJC2Q99543 621 aaKnown RBP12.28□□□□□ -0.44
HDLBP-219ENST00000442714 HAUS7Q99871 368 aa12.28□□□□□ -0.44
HDLBP-219ENST00000442714 MOV10L1Q9BXT6 1211 aaKnown RBP12.28□□□□□ -0.44
HDLBP-219ENST00000442714 ARMT1Q9H993 441 aa12.28□□□□□ -0.44
HDLBP-219ENST00000442714 ATP8A2Q9NTI2 1148 aa12.28□□□□□ -0.44
HDLBP-219ENST00000442714 SWAP70Q9UH65 585 aa12.28□□□□□ -0.44
HDLBP-219ENST00000442714 MGAMO43451 1857 aa12.27□□□□□ -0.44
HDLBP-219ENST00000442714 SMIM22K7EJ46 135 aa12.27□□□□□ -0.45
HDLBP-219ENST00000442714 MPHOSPH10O00566 681 aaKnown RBP12.27□□□□□ -0.45
HDLBP-219ENST00000442714 DSG3P32926 999 aa12.27□□□□□ -0.45
HDLBP-219ENST00000442714 MAGEA10P43363 369 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms