RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 ZNF76P36508 570 aa12.03□□□□□ -0.48
SYNE2-206ENST00000441438 CAP2P40123 477 aa12.03□□□□□ -0.48
SYNE2-206ENST00000441438 CLK2P49760 499 aaKnown RBP12.03□□□□□ -0.48
SYNE2-206ENST00000441438 GABREP78334 506 aa12.03□□□□□ -0.48
SYNE2-206ENST00000441438 CLDN10P78369 228 aa12.03□□□□□ -0.48
SYNE2-206ENST00000441438 ZNF211Q13398 564 aaPredicted RBP12.03□□□□□ -0.48
SYNE2-206ENST00000441438 KIAA0907Q7Z7F0 614 aaPredicted RBP12.03□□□□□ -0.48
SYNE2-206ENST00000441438 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.03□□□□□ -0.48
SYNE2-206ENST00000441438 MOGAT1Q96PD6 335 aa12.03□□□□□ -0.48
SYNE2-206ENST00000441438 TMUB1Q9BVT8 246 aa12.03□□□□□ -0.48
SYNE2-206ENST00000441438 TRIM7Q9C029 511 aa12.03□□□□□ -0.48
SYNE2-206ENST00000441438 MED1Q15648 1581 aaPredicted RBP12.03□□□□□ -0.48
SYNE2-206ENST00000441438 CYP1A2P05177 515 aa12.03□□□□□ -0.48
SYNE2-206ENST00000441438 CA8P35219 290 aa12.03□□□□□ -0.48
SYNE2-206ENST00000441438 NUBP1P53384 320 aa12.03□□□□□ -0.48
SYNE2-206ENST00000441438 RRP1P56182 461 aaKnown RBP12.03□□□□□ -0.48
SYNE2-206ENST00000441438 ELOAQ14241 798 aaKnown RBP12.03□□□□□ -0.48
SYNE2-206ENST00000441438 TKFCQ3LXA3 575 aa12.03□□□□□ -0.48
SYNE2-206ENST00000441438 HPS3Q969F9 1004 aa12.03□□□□□ -0.48
SYNE2-206ENST00000441438 SPATA7Q9P0W8 599 aa12.03□□□□□ -0.48
SYNE2-206ENST00000441438 NOVA2Q9UNW9 492 aaKnown RBP12.03□□□□□ -0.48
SYNE2-206ENST00000441438 F2P00734 622 aa12.02□□□□□ -0.48
SYNE2-206ENST00000441438 VARSP26640 1264 aaKnown RBP12.02□□□□□ -0.48
SYNE2-206ENST00000441438 HSPA4P34932 840 aa12.02□□□□□ -0.48
SYNE2-206ENST00000441438 PRR7Q8TB68 274 aa12.02□□□□□ -0.48
SYNE2-206ENST00000441438 CCDC144AA2RUR9 1427 aa12.02□□□□□ -0.48
SYNE2-206ENST00000441438 H3BRB1 525 aa12.02□□□□□ -0.49
SYNE2-206ENST00000441438 ADCY2Q08462 1091 aa12.02□□□□□ -0.49
SYNE2-206ENST00000441438 SMC1AQ14683 1233 aaKnown RBP12.02□□□□□ -0.49
SYNE2-206ENST00000441438 SFMBT2Q5VUG0 894 aa12.02□□□□□ -0.49
SYNE2-206ENST00000441438 MTHFD1LQ6UB35 978 aa12.02□□□□□ -0.49
SYNE2-206ENST00000441438 MGARPQ8TDB4 240 aa12.02□□□□□ -0.49
SYNE2-206ENST00000441438 KCNN1Q92952 543 aa12.02□□□□□ -0.49
SYNE2-206ENST00000441438 ATP6V1E2Q96A05 226 aa12.02□□□□□ -0.49
SYNE2-206ENST00000441438 TUT1Q9H6E5 874 aaKnown RBP12.02□□□□□ -0.49
SYNE2-206ENST00000441438 INSRP06213 1382 aa12.02□□□□□ -0.49
SYNE2-206ENST00000441438 NALCNQ8IZF0 1738 aa12.02□□□□□ -0.49
SYNE2-206ENST00000441438 ESYT3A0FGR9 886 aa12.02□□□□□ -0.49
SYNE2-206ENST00000441438 MTHFD1P11586 935 aaKnown RBP12.02□□□□□ -0.49
SYNE2-206ENST00000441438 KIF11P52732 1056 aa12.02□□□□□ -0.49
SYNE2-206ENST00000441438 CHMP4BP1P59074 171 aa12.02□□□□□ -0.49
SYNE2-206ENST00000441438 RASA2Q15283 850 aa12.02□□□□□ -0.49
SYNE2-206ENST00000441438 CCDC65Q8IXS2 484 aa12.02□□□□□ -0.49
SYNE2-206ENST00000441438 BRSK1Q8TDC3 778 aa12.02□□□□□ -0.49
SYNE2-206ENST00000441438 ALPK1Q96QP1 1244 aa12.02□□□□□ -0.49
SYNE2-206ENST00000441438 GPHNQ9NQX3 736 aaPredicted RBP12.02□□□□□ -0.49
SYNE2-206ENST00000441438 METTL5Q9NRN9 209 aaKnown RBP12.02□□□□□ -0.49
SYNE2-206ENST00000441438 RALGAPBQ86X10 1494 aa12.01□□□□□ -0.49
SYNE2-206ENST00000441438 FAM170AA1A519 330 aa12.01□□□□□ -0.49
SYNE2-206ENST00000441438 GZMAP12544 262 aa12.01□□□□□ -0.49
SYNE2-206ENST00000441438 RILPL1Q5EBL4 403 aa12.01□□□□□ -0.49
SYNE2-206ENST00000441438 RBM18Q96H35 190 aaKnown RBP12.01□□□□□ -0.49
SYNE2-206ENST00000441438 RSRC1Q96IZ7 334 aaKnown RBP12.01□□□□□ -0.49
SYNE2-206ENST00000441438 SCLT1Q96NL6 688 aa12.01□□□□□ -0.49
SYNE2-206ENST00000441438 PNMA8BQ9ULN7 279 aaPredicted RBP12.01□□□□□ -0.49
SYNE2-206ENST00000441438 SASH1O94885 1247 aa12.01□□□□□ -0.49
SYNE2-206ENST00000441438 SLC5A1P13866 664 aa12.01□□□□□ -0.49
SYNE2-206ENST00000441438 RENBPP51606 427 aa12.01□□□□□ -0.49
SYNE2-206ENST00000441438 SLAIN1Q8ND83 568 aa12.01□□□□□ -0.49
SYNE2-206ENST00000441438 USP33Q8TEY7 942 aa12.01□□□□□ -0.49
SYNE2-206ENST00000441438 ANKARQ7Z5J8 1434 aa12.01□□□□□ -0.49
SYNE2-206ENST00000441438 FOXD2O60548 495 aaPredicted RBP12□□□□□ -0.49
SYNE2-206ENST00000441438 GNAT2P19087 354 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 PAPOLAP51003 745 aaKnown RBP12□□□□□ -0.49
SYNE2-206ENST00000441438 APBA1Q02410 837 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 PDE1CQ14123 709 aaPredicted RBP12□□□□□ -0.49
SYNE2-206ENST00000441438 MFSD10Q14728 455 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 C1orf122Q6ZSJ8 110 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 ANKK1Q8NFD2 765 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 OR8H1Q8NGG4 311 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 ZMAT2Q96NC0 199 aaKnown RBP12□□□□□ -0.49
SYNE2-206ENST00000441438 ZCCHC17Q9NP64 241 aaKnown RBP12□□□□□ -0.49
SYNE2-206ENST00000441438 MORC2Q9Y6X9 1032 aaPredicted RBP12□□□□□ -0.49
SYNE2-206ENST00000441438 EIF3AQ14152 1382 aaKnown RBP12□□□□□ -0.49
SYNE2-206ENST00000441438 IL33O95760 270 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 PFKPQ01813 784 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 TBC1D25Q3MII6 688 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 BUD13Q9BRD0 619 aaKnown RBP eCLIP12□□□□□ -0.49
SYNE2-206ENST00000441438 DNAI2Q9GZS0 605 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 UBAP1Q9NZ09 502 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 KRT10P13645 584 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 INPP5BP32019 993 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 SSTR3P32745 418 aaPredicted RBP12□□□□□ -0.49
SYNE2-206ENST00000441438 IRX1P78414 480 aaPredicted RBP12□□□□□ -0.49
SYNE2-206ENST00000441438 ACAP1Q15027 740 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 SPDYCQ5MJ68 293 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 MZT2AQ6P582 158 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 ZNF354CQ86Y25 554 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 ERC1Q8IUD2 1116 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 SUN5Q8TC36 379 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 RABGGTAQ92696 567 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 NEK1Q96PY6 1258 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 SENP2Q9HC62 589 aa12□□□□□ -0.49
SYNE2-206ENST00000441438 GSCP56915 257 aaPredicted RBP11.99□□□□□ -0.49
SYNE2-206ENST00000441438 PCDHGB3Q9Y5G1 929 aa11.99□□□□□ -0.49
SYNE2-206ENST00000441438 ERBB4Q15303 1308 aa11.99□□□□□ -0.49
SYNE2-206ENST00000441438 ECM1Q16610 540 aa11.99□□□□□ -0.49
SYNE2-206ENST00000441438 OLFML1Q6UWY5 402 aa11.99□□□□□ -0.49
SYNE2-206ENST00000441438 BTN2A1Q7KYR7 527 aa11.99□□□□□ -0.49
SYNE2-206ENST00000441438 TRIM42Q8IWZ5 723 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms