RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 PDE4DIPQ5VU43 2346 aa22.63■■□□□ 1.21
CCDC78-204ENST00000439619 CCNA1P78396 465 aa22.62■■□□□ 1.21
CCDC78-204ENST00000439619 TMEM179Q6ZVK1 233 aa22.62■■□□□ 1.21
CCDC78-204ENST00000439619 SOCS4Q8WXH5 440 aa22.62■■□□□ 1.21
CCDC78-204ENST00000439619 PAGR1Q9BTK6 254 aa22.62■■□□□ 1.21
CCDC78-204ENST00000439619 MYH1P12882 1939 aa22.61■■□□□ 1.21
CCDC78-204ENST00000439619 HMGCRP04035 888 aa22.61■■□□□ 1.21
CCDC78-204ENST00000439619 CENPFP49454 3210 aa22.61■■□□□ 1.21
CCDC78-204ENST00000439619 RRP1P56182 461 aaKnown RBP22.61■■□□□ 1.21
CCDC78-204ENST00000439619 SEPT2Q15019 361 aa22.61■■□□□ 1.21
CCDC78-204ENST00000439619 U2AF1L4Q8WU68 220 aaKnown RBP22.61■■□□□ 1.21
CCDC78-204ENST00000439619 CCDC17Q96LX7 622 aa22.61■■□□□ 1.21
CCDC78-204ENST00000439619 NUDT12Q9BQG2 462 aa22.61■■□□□ 1.21
CCDC78-204ENST00000439619 UNC93B1Q9H1C4 597 aa22.61■■□□□ 1.21
CCDC78-204ENST00000439619 SH2D4AQ9H788 454 aa22.61■■□□□ 1.21
CCDC78-204ENST00000439619 RBPJLQ9UBG7 517 aa22.61■■□□□ 1.21
CCDC78-204ENST00000439619 RABGAP1Q9Y3P9 1069 aa22.61■■□□□ 1.21
CCDC78-204ENST00000439619 ERC2O15083 957 aa22.6■■□□□ 1.21
CCDC78-204ENST00000439619 PRKAB2O43741 272 aa22.6■■□□□ 1.21
CCDC78-204ENST00000439619 GLRX3O76003 335 aaKnown RBP22.6■■□□□ 1.21
CCDC78-204ENST00000439619 ZFYP08048 801 aaPredicted RBP22.6■■□□□ 1.21
CCDC78-204ENST00000439619 VCAM1P19320 739 aa22.6■■□□□ 1.21
CCDC78-204ENST00000439619 ERVK-9P63128 1117 aa22.6■■□□□ 1.21
CCDC78-204ENST00000439619 ERVK-24P63145 666 aa22.6■■□□□ 1.21
CCDC78-204ENST00000439619 TRMT44Q8IYL2 757 aaKnown RBP22.6■■□□□ 1.21
CCDC78-204ENST00000439619 KBTBD3Q8NAB2 608 aa22.6■■□□□ 1.21
CCDC78-204ENST00000439619 ACER1Q8TDN7 264 aa22.6■■□□□ 1.21
CCDC78-204ENST00000439619 SGPL1O95470 568 aa22.59■■□□□ 1.21
CCDC78-204ENST00000439619 CYP2D6P10635 497 aa22.59■■□□□ 1.21
CCDC78-204ENST00000439619 C12orf60Q5U649 245 aa22.59■■□□□ 1.21
CCDC78-204ENST00000439619 CATSPERGQ6ZRH7 1159 aa22.59■■□□□ 1.21
CCDC78-204ENST00000439619 HTATIP2Q9BUP3 242 aa22.59■■□□□ 1.21
CCDC78-204ENST00000439619 ARHGEF10LQ9HCE6 1279 aa22.59■■□□□ 1.21
CCDC78-204ENST00000439619 TXNRD2Q9NNW7 524 aa22.59■■□□□ 1.21
CCDC78-204ENST00000439619 USP17L12C9JPN9 530 aa22.58■■□□□ 1.21
CCDC78-204ENST00000439619 USP17L21D6R901 530 aa22.58■■□□□ 1.21
CCDC78-204ENST00000439619 TFRCP02786 760 aaKnown RBP22.58■■□□□ 1.21
CCDC78-204ENST00000439619 SLFNL1Q499Z3 407 aa22.58■■□□□ 1.21
CCDC78-204ENST00000439619 SHISA4Q96DD7 197 aa22.58■■□□□ 1.21
CCDC78-204ENST00000439619 DEFB118Q96PH6 123 aa22.58■■□□□ 1.21
CCDC78-204ENST00000439619 PUS7LQ9H0K6 701 aaKnown RBP22.58■■□□□ 1.21
CCDC78-204ENST00000439619 RPAP3Q9H6T3 665 aaPredicted RBP22.58■■□□□ 1.21
CCDC78-204ENST00000439619 ARPP21Q9UBL0 812 aaPredicted RBP22.58■■□□□ 1.21
CCDC78-204ENST00000439619 GJD2Q9UKL4 321 aa22.58■■□□□ 1.21
CCDC78-204ENST00000439619 MGAMO43451 1857 aa22.58■■□□□ 1.2
CCDC78-204ENST00000439619 TTC41PQ6P2S7 1318 aa22.57■■□□□ 1.2
CCDC78-204ENST00000439619 KIAA0100Q14667 2235 aaKnown RBP22.57■■□□□ 1.2
CCDC78-204ENST00000439619 GUCY1A2P33402 732 aa22.57■■□□□ 1.2
CCDC78-204ENST00000439619 PLEKHH3Q7Z736 793 aa22.57■■□□□ 1.2
CCDC78-204ENST00000439619 DYNLL2Q96FJ2 89 aa22.57■■□□□ 1.2
CCDC78-204ENST00000439619 HMX1Q9NP08 348 aaPredicted RBP22.57■■□□□ 1.2
CCDC78-204ENST00000439619 NAV1Q8NEY1 1877 aa22.57■■□□□ 1.2
CCDC78-204ENST00000439619 FARP2O94887 1054 aaPredicted RBP22.56■■□□□ 1.2
CCDC78-204ENST00000439619 XRCC5P13010 732 aaKnown RBP22.56■■□□□ 1.2
CCDC78-204ENST00000439619 CYP2B6P20813 491 aa22.56■■□□□ 1.2
CCDC78-204ENST00000439619 CDK8P49336 464 aa22.56■■□□□ 1.2
CCDC78-204ENST00000439619 ICA1Q05084 483 aa22.56■■□□□ 1.2
CCDC78-204ENST00000439619 SLC44A5Q8NCS7 719 aa22.56■■□□□ 1.2
CCDC78-204ENST00000439619 APPBP2Q92624 585 aa22.56■■□□□ 1.2
CCDC78-204ENST00000439619 LPAR1Q92633 364 aa22.56■■□□□ 1.2
CCDC78-204ENST00000439619 DPF3Q92784 378 aa22.56■■□□□ 1.2
CCDC78-204ENST00000439619 HOXC10Q9NYD6 342 aa22.56■■□□□ 1.2
CCDC78-204ENST00000439619 PCDHB15Q9Y5E8 787 aa22.56■■□□□ 1.2
CCDC78-204ENST00000439619 DDX60LQ5H9U9 1706 aaKnown RBP22.56■■□□□ 1.2
CCDC78-204ENST00000439619 RNF113AO15541 343 aaKnown RBP22.55■■□□□ 1.2
CCDC78-204ENST00000439619 SLC34A2O95436 690 aa22.55■■□□□ 1.2
CCDC78-204ENST00000439619 GNAT2P19087 354 aa22.55■■□□□ 1.2
CCDC78-204ENST00000439619 RGS2P41220 211 aa22.55■■□□□ 1.2
CCDC78-204ENST00000439619 WDR78Q5VTH9 848 aa22.55■■□□□ 1.2
CCDC78-204ENST00000439619 GIMAP6Q6P9H5 292 aa22.55■■□□□ 1.2
CCDC78-204ENST00000439619 LBX2Q6XYB7 198 aa22.55■■□□□ 1.2
CCDC78-204ENST00000439619 C16orf86Q6ZW13 317 aa22.55■■□□□ 1.2
CCDC78-204ENST00000439619 GPR142Q7Z601 462 aa22.55■■□□□ 1.2
CCDC78-204ENST00000439619 TANGO6Q9C0B7 1094 aa22.55■■□□□ 1.2
CCDC78-204ENST00000439619 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.55■■□□□ 1.2
CCDC78-204ENST00000439619 PAK6Q9NQU5 681 aaPredicted RBP22.55■■□□□ 1.2
CCDC78-204ENST00000439619 IVNS1ABPQ9Y6Y0 642 aa22.55■■□□□ 1.2
CCDC78-204ENST00000439619 RPTORQ8N122 1335 aa22.55■■□□□ 1.2
CCDC78-204ENST00000439619 ZKSCAN1P17029 563 aaPredicted RBP22.54■■□□□ 1.2
CCDC78-204ENST00000439619 EVX2Q03828 476 aa22.54■■□□□ 1.2
CCDC78-204ENST00000439619 COG2Q14746 738 aa22.54■■□□□ 1.2
CCDC78-204ENST00000439619 Q3C1V9 767 aa22.54■■□□□ 1.2
CCDC78-204ENST00000439619 TSHZ3Q63HK5 1081 aa22.54■■□□□ 1.2
CCDC78-204ENST00000439619 CTR9Q6PD62 1173 aa22.54■■□□□ 1.2
CCDC78-204ENST00000439619 YTHDC1Q96MU7 727 aaKnown RBP22.54■■□□□ 1.2
CCDC78-204ENST00000439619 STRBPQ96SI9 672 aaKnown RBP22.54■■□□□ 1.2
CCDC78-204ENST00000439619 PORCNQ9H237 461 aa22.54■■□□□ 1.2
CCDC78-204ENST00000439619 PEX10O60683 326 aa22.53■■□□□ 1.2
CCDC78-204ENST00000439619 CHGBP05060 677 aa22.53■■□□□ 1.2
CCDC78-204ENST00000439619 AKR1B1P15121 316 aa22.53■■□□□ 1.2
CCDC78-204ENST00000439619 KANSL2Q9H9L4 492 aa22.53■■□□□ 1.2
CCDC78-204ENST00000439619 ZNF287Q9HBT7 754 aa22.53■■□□□ 1.2
CCDC78-204ENST00000439619 CYP2D7A0A087X1C5 515 aa22.52■■□□□ 1.2
CCDC78-204ENST00000439619 A0A1W2PRG0 241 aa22.52■■□□□ 1.2
CCDC78-204ENST00000439619 APPP05067 770 aa22.52■■□□□ 1.2
CCDC78-204ENST00000439619 APBA2Q99767 749 aa22.52■■□□□ 1.2
CCDC78-204ENST00000439619 TMX2Q9Y320 296 aa22.52■■□□□ 1.2
CCDC78-204ENST00000439619 SPDYE16A6NNV3 312 aaPredicted RBP22.51■■□□□ 1.19
CCDC78-204ENST00000439619 MX1P20591 662 aa22.51■■□□□ 1.19
CCDC78-204ENST00000439619 TDO2P48775 406 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms