RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 GRAMD1CQ8IYS0 662 aa13.89□□□□□ -0.19
HDAC8-214ENST00000439122 CTCFLQ8NI51 663 aaPredicted RBP13.89□□□□□ -0.19
HDAC8-214ENST00000439122 SMARCE1Q969G3 411 aa13.89□□□□□ -0.19
HDAC8-214ENST00000439122 BRMS1Q9HCU9 246 aa13.89□□□□□ -0.19
HDAC8-214ENST00000439122 MAN1B1Q9UKM7 699 aa13.89□□□□□ -0.19
HDAC8-214ENST00000439122 PDS5AQ29RF7 1337 aaKnown RBP13.88□□□□□ -0.19
HDAC8-214ENST00000439122 BAZ2BQ9UIF8 2168 aaKnown RBP13.88□□□□□ -0.19
HDAC8-214ENST00000439122 NRDCO43847 1150 aa13.88□□□□□ -0.19
HDAC8-214ENST00000439122 TOM1O60784 492 aa13.88□□□□□ -0.19
HDAC8-214ENST00000439122 TMTC3Q6ZXV5 915 aa13.88□□□□□ -0.19
HDAC8-214ENST00000439122 DZIP1Q86YF9 867 aaKnown RBP13.88□□□□□ -0.19
HDAC8-214ENST00000439122 DPF2Q92785 391 aa13.88□□□□□ -0.19
HDAC8-214ENST00000439122 ATP8A2Q9NTI2 1148 aa13.88□□□□□ -0.19
HDAC8-214ENST00000439122 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.88□□□□□ -0.19
HDAC8-214ENST00000439122 ORC4O43929 436 aa13.87□□□□□ -0.19
HDAC8-214ENST00000439122 HSP90AA4PQ58FG1 418 aa13.87□□□□□ -0.19
HDAC8-214ENST00000439122 AMIGO3Q86WK7 504 aa13.87□□□□□ -0.19
HDAC8-214ENST00000439122 ARHGEF1Q92888 912 aaKnown RBP13.87□□□□□ -0.19
HDAC8-214ENST00000439122 ARPP21Q9UBL0 812 aaPredicted RBP13.87□□□□□ -0.19
HDAC8-214ENST00000439122 TSPY2A6NKD2 308 aa13.87□□□□□ -0.19
HDAC8-214ENST00000439122 DHX8Q14562 1220 aaKnown RBP13.87□□□□□ -0.19
HDAC8-214ENST00000439122 ZNF827Q17R98 1081 aa13.87□□□□□ -0.19
HDAC8-214ENST00000439122 KANK3Q6NY19 840 aa13.87□□□□□ -0.19
HDAC8-214ENST00000439122 SRBD1Q8N5C6 995 aaKnown RBP13.87□□□□□ -0.19
HDAC8-214ENST00000439122 MCM9Q9NXL9 1143 aa13.87□□□□□ -0.19
HDAC8-214ENST00000439122 ANKIB1Q9P2G1 1089 aa13.87□□□□□ -0.19
HDAC8-214ENST00000439122 ACTN4O43707 911 aaKnown RBP13.86□□□□□ -0.19
HDAC8-214ENST00000439122 TM4SF1P30408 202 aa13.86□□□□□ -0.19
HDAC8-214ENST00000439122 NT5DC1Q5TFE4 455 aa13.86□□□□□ -0.19
HDAC8-214ENST00000439122 DHX58Q96C10 678 aa13.86□□□□□ -0.19
HDAC8-214ENST00000439122 EPSTI1Q96J88 318 aa13.86□□□□□ -0.19
HDAC8-214ENST00000439122 ZNF174Q15697 407 aa13.86□□□□□ -0.19
HDAC8-214ENST00000439122 PTPN21Q16825 1174 aa13.86□□□□□ -0.19
HDAC8-214ENST00000439122 E4F1Q66K89 784 aaPredicted RBP13.86□□□□□ -0.19
HDAC8-214ENST00000439122 MLKLQ8NB16 471 aa13.86□□□□□ -0.19
HDAC8-214ENST00000439122 UBE2Q2Q8WVN8 375 aa13.86□□□□□ -0.19
HDAC8-214ENST00000439122 KCND1Q9NSA2 647 aa13.86□□□□□ -0.19
HDAC8-214ENST00000439122 DACH1Q9UI36 760 aa13.86□□□□□ -0.19
HDAC8-214ENST00000439122 CNTNAP5Q8WYK1 1306 aa13.86□□□□□ -0.19
HDAC8-214ENST00000439122 WNT7AO00755 349 aa13.85□□□□□ -0.19
HDAC8-214ENST00000439122 MYO1BO43795 1136 aa13.85□□□□□ -0.19
HDAC8-214ENST00000439122 USP17L8P0C7I0 530 aa13.85□□□□□ -0.19
HDAC8-214ENST00000439122 CDK11BP21127 795 aaKnown RBP13.85□□□□□ -0.19
HDAC8-214ENST00000439122 SARSP49591 514 aaKnown RBP13.85□□□□□ -0.19
HDAC8-214ENST00000439122 FMR1Q06787 632 aaKnown RBP eCLIP13.85□□□□□ -0.19
HDAC8-214ENST00000439122 NOM1Q5C9Z4 860 aaKnown RBP13.85□□□□□ -0.19
HDAC8-214ENST00000439122 SPTY2D1Q68D10 685 aaPredicted RBP13.85□□□□□ -0.19
HDAC8-214ENST00000439122 CCDC34Q96HJ3 373 aa13.85□□□□□ -0.19
HDAC8-214ENST00000439122 NOL10Q9BSC4 688 aaKnown RBP13.85□□□□□ -0.19
HDAC8-214ENST00000439122 BCL11BQ9C0K0 894 aaPredicted RBP13.85□□□□□ -0.19
HDAC8-214ENST00000439122 TMEM232C9JQI7 657 aa13.85□□□□□ -0.19
HDAC8-214ENST00000439122 TOP1P11387 765 aaKnown RBP13.85□□□□□ -0.19
HDAC8-214ENST00000439122 RFC4P35249 363 aa13.85□□□□□ -0.19
HDAC8-214ENST00000439122 MORC3Q14149 939 aa13.85□□□□□ -0.19
HDAC8-214ENST00000439122 SBK1Q52WX2 424 aa13.85□□□□□ -0.19
HDAC8-214ENST00000439122 TRMT44Q8IYL2 757 aaKnown RBP13.85□□□□□ -0.19
HDAC8-214ENST00000439122 SYMPKQ92797 1274 aaKnown RBP13.85□□□□□ -0.19
HDAC8-214ENST00000439122 NFE2L3Q9Y4A8 694 aa13.85□□□□□ -0.19
HDAC8-214ENST00000439122 BTAF1O14981 1849 aa13.84□□□□□ -0.19
HDAC8-214ENST00000439122 A0A087X0B3 334 aa13.84□□□□□ -0.19
HDAC8-214ENST00000439122 BMP15O95972 392 aa13.84□□□□□ -0.19
HDAC8-214ENST00000439122 AFMP43652 599 aa13.84□□□□□ -0.19
HDAC8-214ENST00000439122 USP5P45974 858 aa13.84□□□□□ -0.19
HDAC8-214ENST00000439122 NLRP5P59047 1200 aa13.84□□□□□ -0.19
HDAC8-214ENST00000439122 NPY5RQ15761 445 aa13.84□□□□□ -0.19
HDAC8-214ENST00000439122 TTC38Q5R3I4 469 aa13.84□□□□□ -0.19
HDAC8-214ENST00000439122 SLC51AQ86UW1 340 aa13.84□□□□□ -0.19
HDAC8-214ENST00000439122 VSTM4Q8IW00 320 aa13.84□□□□□ -0.19
HDAC8-214ENST00000439122 PDCL2Q8N4E4 241 aa13.84□□□□□ -0.19
HDAC8-214ENST00000439122 TRIML1Q8N9V2 468 aa13.84□□□□□ -0.19
HDAC8-214ENST00000439122 KIF18AQ8NI77 898 aa13.84□□□□□ -0.19
HDAC8-214ENST00000439122 FERMT2Q96AC1 680 aa13.84□□□□□ -0.19
HDAC8-214ENST00000439122 PPP1R13BQ96KQ4 1090 aa13.84□□□□□ -0.19
HDAC8-214ENST00000439122 CCDC88AQ3V6T2 1871 aa13.84□□□□□ -0.19
HDAC8-214ENST00000439122 DLEC1Q9Y238 1755 aa13.84□□□□□ -0.19
HDAC8-214ENST00000439122 COL24A1Q17RW2 1714 aa13.84□□□□□ -0.19
HDAC8-214ENST00000439122 LDHBP07195 334 aaKnown RBP13.84□□□□□ -0.19
HDAC8-214ENST00000439122 SCG2P13521 617 aa13.84□□□□□ -0.19
HDAC8-214ENST00000439122 NCBP1Q09161 790 aaKnown RBP13.84□□□□□ -0.19
HDAC8-214ENST00000439122 ANKRD7Q92527 254 aa13.84□□□□□ -0.19
HDAC8-214ENST00000439122 TNFRSF25Q93038 417 aa13.84□□□□□ -0.19
HDAC8-214ENST00000439122 PSDA5PKW4 1024 aaPredicted RBP13.83□□□□□ -0.2
HDAC8-214ENST00000439122 VWA3AA6NCI4 1184 aa13.83□□□□□ -0.2
HDAC8-214ENST00000439122 KIF2AO00139 706 aaPredicted RBP13.83□□□□□ -0.2
HDAC8-214ENST00000439122 KIF5BP33176 963 aa13.83□□□□□ -0.2
HDAC8-214ENST00000439122 TFAP4Q01664 338 aa13.83□□□□□ -0.2
HDAC8-214ENST00000439122 PTGDRQ13258 359 aa13.83□□□□□ -0.2
HDAC8-214ENST00000439122 PIK3AP1Q6ZUJ8 805 aa13.83□□□□□ -0.2
HDAC8-214ENST00000439122 ENOX1Q8TC92 643 aaKnown RBP13.83□□□□□ -0.2
HDAC8-214ENST00000439122 CCDC94Q9BW85 323 aaPredicted RBP13.83□□□□□ -0.2
HDAC8-214ENST00000439122 KAT14Q9H8E8 782 aa13.83□□□□□ -0.2
HDAC8-214ENST00000439122 LAMB1P07942 1786 aa13.83□□□□□ -0.2
HDAC8-214ENST00000439122 SLFN14P0C7P3 912 aa13.82□□□□□ -0.2
HDAC8-214ENST00000439122 VEGFAP15692 232 aaPredicted RBP13.82□□□□□ -0.2
HDAC8-214ENST00000439122 GOLGA8FQ08AF8 430 aa13.82□□□□□ -0.2
HDAC8-214ENST00000439122 GOLGA8DPQ0D2H9 430 aa13.82□□□□□ -0.2
HDAC8-214ENST00000439122 NFIXQ14938 502 aa13.82□□□□□ -0.2
HDAC8-214ENST00000439122 TRAPPC3LQ5T215 181 aa13.82□□□□□ -0.2
HDAC8-214ENST00000439122 RCSD1Q6JBY9 416 aa13.82□□□□□ -0.2
HDAC8-214ENST00000439122 TMED8Q6PL24 325 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms