RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 TRMT44Q8IYL2 757 aaKnown RBP13.35□□□□□ -0.27
SPTLC1P4-201ENST00000435997 APBA2Q99767 749 aa13.35□□□□□ -0.27
SPTLC1P4-201ENST00000435997 NBPF3Q9H094 633 aa13.35□□□□□ -0.27
SPTLC1P4-201ENST00000435997 IGHA2P01877 340 aa13.34□□□□□ -0.27
SPTLC1P4-201ENST00000435997 ZKSCAN1P17029 563 aaPredicted RBP13.34□□□□□ -0.27
SPTLC1P4-201ENST00000435997 GUCY1A2P33402 732 aa13.34□□□□□ -0.27
SPTLC1P4-201ENST00000435997 HNRNPUQ00839 825 aaKnown RBP eCLIP13.34□□□□□ -0.27
SPTLC1P4-201ENST00000435997 PDE3AQ14432 1141 aa13.34□□□□□ -0.27
SPTLC1P4-201ENST00000435997 AACSQ86V21 672 aa13.34□□□□□ -0.27
SPTLC1P4-201ENST00000435997 C11orf49Q9H6J7 331 aa13.34□□□□□ -0.27
SPTLC1P4-201ENST00000435997 EXOC6BQ9Y2D4 811 aa13.34□□□□□ -0.27
SPTLC1P4-201ENST00000435997 RABGAP1Q9Y3P9 1069 aa13.34□□□□□ -0.27
SPTLC1P4-201ENST00000435997 MYO5AQ9Y4I1 1855 aaKnown RBP13.33□□□□□ -0.27
SPTLC1P4-201ENST00000435997 USP17L15C9J2P7 530 aa13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 USP17L13C9JLJ4 530 aa13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 USP17L11C9JVI0 530 aa13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 USP17L18D6R9N7 530 aa13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 USP17L22D6RA61 530 aa13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 USP17L17D6RBQ6 530 aa13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 USP17L19D6RCP7 530 aa13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 USP17L20D6RJB6 530 aa13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 RGS2P41220 211 aa13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 USP5P45974 858 aa13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 PLCD1P51178 756 aa13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 USP14P54578 494 aa13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 CACNB2Q08289 660 aaPredicted RBP13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 USP17L24Q0WX57 530 aa13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 CCL14Q16627 93 aa13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 LHX8Q68G74 356 aa13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 CATSPERGQ6ZRH7 1159 aa13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 PLEKHH3Q7Z736 793 aa13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 PAGR1Q9BTK6 254 aa13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 STAP2Q9UGK3 403 aa13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 ZBED9Q6R2W3 1325 aa13.33□□□□□ -0.28
SPTLC1P4-201ENST00000435997 SPDYE16A6NNV3 312 aaPredicted RBP13.32□□□□□ -0.28
SPTLC1P4-201ENST00000435997 HOXC6P09630 235 aa13.32□□□□□ -0.28
SPTLC1P4-201ENST00000435997 PDE6AP16499 860 aa13.32□□□□□ -0.28
SPTLC1P4-201ENST00000435997 CCND3P30281 292 aaPredicted RBP13.32□□□□□ -0.28
SPTLC1P4-201ENST00000435997 ABCB5Q2M3G0 1257 aa13.32□□□□□ -0.28
SPTLC1P4-201ENST00000435997 CERKLQ49MI3 558 aaPredicted RBP13.32□□□□□ -0.28
SPTLC1P4-201ENST00000435997 TTC6Q86TZ1 520 aa13.32□□□□□ -0.28
SPTLC1P4-201ENST00000435997 C7orf61Q8IZ16 206 aa13.32□□□□□ -0.28
SPTLC1P4-201ENST00000435997 RHPN1Q8TCX5 695 aa13.32□□□□□ -0.28
SPTLC1P4-201ENST00000435997 ACER1Q8TDN7 264 aa13.32□□□□□ -0.28
SPTLC1P4-201ENST00000435997 PANK1Q8TE04 598 aa13.32□□□□□ -0.28
SPTLC1P4-201ENST00000435997 FEZ1Q99689 392 aa13.32□□□□□ -0.28
SPTLC1P4-201ENST00000435997 TCRBV5S4A2TA0A5A2 114 aa13.31□□□□□ -0.28
SPTLC1P4-201ENST00000435997 EVX2Q03828 476 aa13.31□□□□□ -0.28
SPTLC1P4-201ENST00000435997 MAP2K5Q13163 448 aa13.31□□□□□ -0.28
SPTLC1P4-201ENST00000435997 GRB14Q14449 540 aa13.31□□□□□ -0.28
SPTLC1P4-201ENST00000435997 RAB3GAP1Q15042 981 aa13.31□□□□□ -0.28
SPTLC1P4-201ENST00000435997 HSP90AB4PQ58FF6 505 aa13.31□□□□□ -0.28
SPTLC1P4-201ENST00000435997 LRCH3Q96II8 777 aa13.31□□□□□ -0.28
SPTLC1P4-201ENST00000435997 FLRT1Q9NZU1 646 aa13.31□□□□□ -0.28
SPTLC1P4-201ENST00000435997 BTBD7Q9P203 1132 aa13.31□□□□□ -0.28
SPTLC1P4-201ENST00000435997 MAGEB6P1A0A0J9YX57 407 aa13.3□□□□□ -0.28
SPTLC1P4-201ENST00000435997 CCNA1P78396 465 aa13.3□□□□□ -0.28
SPTLC1P4-201ENST00000435997 TTF1Q15361 905 aaPredicted RBP13.3□□□□□ -0.28
SPTLC1P4-201ENST00000435997 ZYXQ15942 572 aaKnown RBP13.3□□□□□ -0.28
SPTLC1P4-201ENST00000435997 GPR153Q6NV75 609 aa13.3□□□□□ -0.28
SPTLC1P4-201ENST00000435997 SIRT2Q8IXJ6 389 aa13.3□□□□□ -0.28
SPTLC1P4-201ENST00000435997 IL1RAPL2Q9NP60 686 aa13.3□□□□□ -0.28
SPTLC1P4-201ENST00000435997 DCP1AQ9NPI6 582 aaPredicted RBP13.3□□□□□ -0.28
SPTLC1P4-201ENST00000435997 ZMYND8Q9ULU4 1186 aaPredicted RBP13.3□□□□□ -0.28
SPTLC1P4-201ENST00000435997 A0A0G2JMZ2 1700 aa13.3□□□□□ -0.28
SPTLC1P4-201ENST00000435997 COL6A3P12111 3177 aa13.3□□□□□ -0.28
SPTLC1P4-201ENST00000435997 A0A1W2PRG0 241 aa13.29□□□□□ -0.28
SPTLC1P4-201ENST00000435997 SLC15A5A6NIM6 579 aa13.29□□□□□ -0.28
SPTLC1P4-201ENST00000435997 PTPREP23469 700 aa13.29□□□□□ -0.28
SPTLC1P4-201ENST00000435997 MAGEA10P43363 369 aaPredicted RBP13.29□□□□□ -0.28
SPTLC1P4-201ENST00000435997 LRIT3Q3SXY7 679 aa13.29□□□□□ -0.28
SPTLC1P4-201ENST00000435997 SLC9C2Q5TAH2 1124 aa13.29□□□□□ -0.28
SPTLC1P4-201ENST00000435997 KIF1BPQ96EK5 621 aa13.29□□□□□ -0.28
SPTLC1P4-201ENST00000435997 CRNKL1Q9BZJ0 848 aaKnown RBP13.29□□□□□ -0.28
SPTLC1P4-201ENST00000435997 RPAP3Q9H6T3 665 aaPredicted RBP13.29□□□□□ -0.28
SPTLC1P4-201ENST00000435997 ZNF532Q9HCE3 1301 aa13.29□□□□□ -0.28
SPTLC1P4-201ENST00000435997 ZNF236Q9UL36 1845 aa13.29□□□□□ -0.28
SPTLC1P4-201ENST00000435997 NAV1Q8NEY1 1877 aa13.29□□□□□ -0.28
SPTLC1P4-201ENST00000435997 SEPT2Q15019 361 aa13.28□□□□□ -0.28
SPTLC1P4-201ENST00000435997 LRRC26Q2I0M4 334 aa13.28□□□□□ -0.28
SPTLC1P4-201ENST00000435997 CCAR1Q8IX12 1150 aaKnown RBP13.28□□□□□ -0.28
SPTLC1P4-201ENST00000435997 LCORLQ8N3X6 602 aa13.28□□□□□ -0.28
SPTLC1P4-201ENST00000435997 SDR42E1Q8WUS8 393 aa13.28□□□□□ -0.28
SPTLC1P4-201ENST00000435997 CABP5Q9NP86 173 aa13.28□□□□□ -0.28
SPTLC1P4-201ENST00000435997 ZBTB40Q9NUA8 1239 aa13.28□□□□□ -0.28
SPTLC1P4-201ENST00000435997 MYH1P12882 1939 aa13.28□□□□□ -0.28
SPTLC1P4-201ENST00000435997 GLRX3O76003 335 aaKnown RBP13.27□□□□□ -0.29
SPTLC1P4-201ENST00000435997 POLR3DP05423 398 aaPredicted RBP13.27□□□□□ -0.29
SPTLC1P4-201ENST00000435997 CYBAP13498 195 aa13.27□□□□□ -0.29
SPTLC1P4-201ENST00000435997 SYN1P17600 705 aa13.27□□□□□ -0.29
SPTLC1P4-201ENST00000435997 KIAA1755Q5JYT7 1200 aa13.27□□□□□ -0.29
SPTLC1P4-201ENST00000435997 MFSD14CQ5VZR4 134 aa13.27□□□□□ -0.29
SPTLC1P4-201ENST00000435997 RPAP2Q8IXW5 612 aaPredicted RBP13.27□□□□□ -0.29
SPTLC1P4-201ENST00000435997 TDHQ8IZJ6 230 aa13.27□□□□□ -0.29
SPTLC1P4-201ENST00000435997 MIER1Q8N108 512 aa13.27□□□□□ -0.29
SPTLC1P4-201ENST00000435997 CLASRPQ8N2M8 674 aaKnown RBP13.27□□□□□ -0.29
SPTLC1P4-201ENST00000435997 SLC44A5Q8NCS7 719 aa13.27□□□□□ -0.29
SPTLC1P4-201ENST00000435997 NPLOC4Q8TAT6 608 aa13.27□□□□□ -0.29
SPTLC1P4-201ENST00000435997 EDC3Q96F86 508 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms