RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 CAPN2P17655 700 aa12.36□□□□□ -0.43
SCN4A-201ENST00000435607 ZNF174Q15697 407 aa12.36□□□□□ -0.43
SCN4A-201ENST00000435607 NT5C3AQ9H0P0 336 aa12.36□□□□□ -0.43
SCN4A-201ENST00000435607 ANGPTL3Q9Y5C1 460 aa12.36□□□□□ -0.43
SCN4A-201ENST00000435607 RUFY4Q6ZNE9 571 aa12.36□□□□□ -0.43
SCN4A-201ENST00000435607 CTNND2Q9UQB3 1225 aa12.36□□□□□ -0.43
SCN4A-201ENST00000435607 ZNF233A6NK53 670 aa12.36□□□□□ -0.43
SCN4A-201ENST00000435607 RASSF2P50749 326 aa12.36□□□□□ -0.43
SCN4A-201ENST00000435607 SOS1Q07889 1333 aaPredicted RBP12.36□□□□□ -0.43
SCN4A-201ENST00000435607 UHRF1BP1LA0JNW5 1464 aa12.36□□□□□ -0.43
SCN4A-201ENST00000435607 BSPRYQ5W0U4 402 aa12.36□□□□□ -0.43
SCN4A-201ENST00000435607 EFCAB13Q8IY85 973 aa12.36□□□□□ -0.43
SCN4A-201ENST00000435607 TXKP42681 527 aa12.36□□□□□ -0.43
SCN4A-201ENST00000435607 LIG4P49917 911 aa12.36□□□□□ -0.43
SCN4A-201ENST00000435607 NONOQ15233 471 aaKnown RBP eCLIP12.36□□□□□ -0.43
SCN4A-201ENST00000435607 TSNAXIP1Q2TAA8 658 aa12.36□□□□□ -0.43
SCN4A-201ENST00000435607 HERC4Q5GLZ8 1057 aaPredicted RBP12.36□□□□□ -0.43
SCN4A-201ENST00000435607 JPH2Q9BR39 696 aaPredicted RBP12.36□□□□□ -0.43
SCN4A-201ENST00000435607 IBTKQ9P2D0 1353 aaPredicted RBP12.35□□□□□ -0.43
SCN4A-201ENST00000435607 HMGB3O15347 200 aaKnown RBP12.35□□□□□ -0.43
SCN4A-201ENST00000435607 KRT15P19012 456 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 TCP10Q12799 353 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 GANCQ8TET4 914 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 MRPL11Q9Y3B7 192 aaKnown RBP12.35□□□□□ -0.43
SCN4A-201ENST00000435607 NUB1Q9Y5A7 615 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 GARSP41250 739 aaKnown RBP12.35□□□□□ -0.43
SCN4A-201ENST00000435607 NMIQ13287 307 aaPredicted RBP12.35□□□□□ -0.43
SCN4A-201ENST00000435607 RAB44Q7Z6P3 723 aaPredicted RBP12.35□□□□□ -0.43
SCN4A-201ENST00000435607 TMX3Q96JJ7 454 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 TBC1D8O95759 1140 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 HCLS1P14317 486 aaPredicted RBP12.35□□□□□ -0.43
SCN4A-201ENST00000435607 IFRD2Q12894 506 aaPredicted RBP12.35□□□□□ -0.43
SCN4A-201ENST00000435607 PPFIA1Q13136 1202 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 TFDP1Q14186 410 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 RINT1Q6NUQ1 792 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 C8orf74Q6P047 294 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 MICALL1Q8N3F8 863 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 SNX29Q8TEQ0 813 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 IFT122Q9HBG6 1241 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 LZTFL1Q9NQ48 299 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 PPFIA4O75335 1185 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 ATP8B2P98198 1209 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 CYP26C1Q6V0L0 522 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 HDXQ7Z353 690 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 MIER3Q7Z3K6 550 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 TSKSQ9UJT2 592 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 PCDHB13Q9Y5F0 798 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 N4BP1O75113 896 aaKnown RBP12.35□□□□□ -0.43
SCN4A-201ENST00000435607 PCK1P35558 622 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 ANKRD20A3Q5VUR7 823 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 SCYL1Q96KG9 808 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 HSPA8P11142 646 aaKnown RBP12.35□□□□□ -0.43
SCN4A-201ENST00000435607 IQCB1Q15051 598 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 KRT26Q7Z3Y9 468 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 POMGNT1Q8WZA1 660 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 KRT12Q99456 494 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 NRBP2Q9NSY0 501 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 ARHGEF11O15085 1522 aa12.35□□□□□ -0.43
SCN4A-201ENST00000435607 ELF1P32519 619 aa12.34□□□□□ -0.43
SCN4A-201ENST00000435607 JADE1Q6IE81 842 aa12.34□□□□□ -0.43
SCN4A-201ENST00000435607 NCAPG2Q86XI2 1143 aa12.34□□□□□ -0.43
SCN4A-201ENST00000435607 IQCDQ96DY2 449 aa12.34□□□□□ -0.43
SCN4A-201ENST00000435607 ESYT1Q9BSJ8 1104 aa12.34□□□□□ -0.43
SCN4A-201ENST00000435607 TESPA1A2RU30 521 aaPredicted RBP12.34□□□□□ -0.43
SCN4A-201ENST00000435607 ZSCAN20P17040 1043 aaPredicted RBP12.34□□□□□ -0.43
SCN4A-201ENST00000435607 CSGALNACT2Q8N6G5 542 aa12.34□□□□□ -0.43
SCN4A-201ENST00000435607 RIC8AQ9NPQ8 531 aa12.34□□□□□ -0.43
SCN4A-201ENST00000435607 DACT1Q9NYF0 836 aa12.34□□□□□ -0.43
SCN4A-201ENST00000435607 USP21Q9UK80 565 aa12.34□□□□□ -0.43
SCN4A-201ENST00000435607 SLC13A4Q9UKG4 626 aa12.34□□□□□ -0.43
SCN4A-201ENST00000435607 WDR17Q8IZU2 1322 aa12.34□□□□□ -0.43
SCN4A-201ENST00000435607 ODR4Q5SWX8 454 aa12.34□□□□□ -0.43
SCN4A-201ENST00000435607 ARMC9Q7Z3E5 817 aa12.34□□□□□ -0.43
SCN4A-201ENST00000435607 NDUFAF2Q8N183 169 aa12.34□□□□□ -0.43
SCN4A-201ENST00000435607 NCAPD3P42695 1498 aa12.34□□□□□ -0.43
SCN4A-201ENST00000435607 PPIP5K1Q6PFW1 1433 aa12.34□□□□□ -0.43
SCN4A-201ENST00000435607 FBXW4P57775 412 aa12.34□□□□□ -0.43
SCN4A-201ENST00000435607 DBN1Q16643 649 aa12.34□□□□□ -0.43
SCN4A-201ENST00000435607 RSRC2Q7L4I2 434 aaKnown RBP12.34□□□□□ -0.43
SCN4A-201ENST00000435607 CCDC105Q8IYK2 499 aa12.34□□□□□ -0.43
SCN4A-201ENST00000435607 SCYL2Q6P3W7 929 aa12.34□□□□□ -0.43
SCN4A-201ENST00000435607 RAB20Q9NX57 234 aa12.34□□□□□ -0.43
SCN4A-201ENST00000435607 SCAF11Q99590 1463 aaKnown RBP12.34□□□□□ -0.43
SCN4A-201ENST00000435607 APOBRQ0VD83 1088 aa12.33□□□□□ -0.43
SCN4A-201ENST00000435607 MAPK8IP2Q13387 824 aaPredicted RBP12.33□□□□□ -0.43
SCN4A-201ENST00000435607 FNBP4Q8N3X1 1017 aaPredicted RBP12.33□□□□□ -0.43
SCN4A-201ENST00000435607 CCDC124Q96CT7 223 aaKnown RBP12.33□□□□□ -0.43
SCN4A-201ENST00000435607 GRK7Q8WTQ7 553 aa12.33□□□□□ -0.44
SCN4A-201ENST00000435607 TRERF1Q96PN7 1200 aa12.33□□□□□ -0.44
SCN4A-201ENST00000435607 UBN1Q9NPG3 1134 aa12.33□□□□□ -0.44
SCN4A-201ENST00000435607 FAM102BQ5T8I3 360 aa12.33□□□□□ -0.44
SCN4A-201ENST00000435607 TSHZ3Q63HK5 1081 aa12.33□□□□□ -0.44
SCN4A-201ENST00000435607 NXNQ6DKJ4 435 aa12.33□□□□□ -0.44
SCN4A-201ENST00000435607 HDAC11Q96DB2 347 aa12.33□□□□□ -0.44
SCN4A-201ENST00000435607 CLGNO14967 610 aa12.33□□□□□ -0.44
SCN4A-201ENST00000435607 RETREG2Q8NC44 543 aa12.33□□□□□ -0.44
SCN4A-201ENST00000435607 RAB17Q9H0T7 212 aa12.33□□□□□ -0.44
SCN4A-201ENST00000435607 ABT1Q9ULW3 272 aaKnown RBP12.33□□□□□ -0.44
SCN4A-201ENST00000435607 PYGLP06737 847 aa12.33□□□□□ -0.44
SCN4A-201ENST00000435607 SDSP20132 328 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms