RNA–Protein interactions for RNA: ENST00000435437.2

RPE-207, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-207ENST00000435437 APPBP2Q92624 585 aa10.65□□□□□ -0.7
RPE-207ENST00000435437 ZNF333Q96JL9 665 aa10.65□□□□□ -0.7
RPE-207ENST00000435437 C12orf42Q96LP6 360 aa10.65□□□□□ -0.7
RPE-207ENST00000435437 P2RX7Q99572 595 aaKnown RBP10.65□□□□□ -0.7
RPE-207ENST00000435437 COL11A1P12107 1806 aaPredicted RBP10.65□□□□□ -0.71
RPE-207ENST00000435437 ROBO3Q96MS0 1386 aa10.65□□□□□ -0.71
RPE-207ENST00000435437 GPAA1O43292 621 aa10.64□□□□□ -0.71
RPE-207ENST00000435437 PSMC4P43686 418 aa10.64□□□□□ -0.71
RPE-207ENST00000435437 CDK8P49336 464 aa10.64□□□□□ -0.71
RPE-207ENST00000435437 PRKCZQ05513 592 aa10.64□□□□□ -0.71
RPE-207ENST00000435437 CERKLQ49MI3 558 aaPredicted RBP10.64□□□□□ -0.71
RPE-207ENST00000435437 C16orf86Q6ZW13 317 aa10.64□□□□□ -0.71
RPE-207ENST00000435437 TTC6Q86TZ1 520 aa10.64□□□□□ -0.71
RPE-207ENST00000435437 PLEKHM2Q8IWE5 1019 aa10.64□□□□□ -0.71
RPE-207ENST00000435437 ANKRD13CQ8N6S4 541 aa10.64□□□□□ -0.71
RPE-207ENST00000435437 SH3TC2Q8TF17 1288 aa10.64□□□□□ -0.71
RPE-207ENST00000435437 PARK7Q99497 189 aaKnown RBP10.64□□□□□ -0.71
RPE-207ENST00000435437 TBC1D2Q9BYX2 928 aa10.64□□□□□ -0.71
RPE-207ENST00000435437 LNPKQ9C0E8 428 aa10.64□□□□□ -0.71
RPE-207ENST00000435437 ATP8A2Q9NTI2 1148 aa10.64□□□□□ -0.71
RPE-207ENST00000435437 RBPJLQ9UBG7 517 aa10.64□□□□□ -0.71
RPE-207ENST00000435437 MORF4L1Q9UBU8 362 aa10.64□□□□□ -0.71
RPE-207ENST00000435437 SRRDQ9UH36 339 aa10.64□□□□□ -0.71
RPE-207ENST00000435437 SLC4A4Q9Y6R1 1079 aa10.64□□□□□ -0.71
RPE-207ENST00000435437 USP17L10C9JJH3 530 aa10.63□□□□□ -0.71
RPE-207ENST00000435437 GLRX3O76003 335 aaKnown RBP10.63□□□□□ -0.71
RPE-207ENST00000435437 POLR3DP05423 398 aaPredicted RBP10.63□□□□□ -0.71
RPE-207ENST00000435437 RASA1P20936 1047 aa10.63□□□□□ -0.71
RPE-207ENST00000435437 FXR2P51116 673 aaKnown RBP eCLIP10.63□□□□□ -0.71
RPE-207ENST00000435437 MTFR1Q15390 333 aa10.63□□□□□ -0.71
RPE-207ENST00000435437 ZYXQ15942 572 aaKnown RBP10.63□□□□□ -0.71
RPE-207ENST00000435437 ABCB5Q2M3G0 1257 aa10.63□□□□□ -0.71
RPE-207ENST00000435437 SBK1Q52WX2 424 aa10.63□□□□□ -0.71
RPE-207ENST00000435437 VPS53Q5VIR6 699 aa10.63□□□□□ -0.71
RPE-207ENST00000435437 GCC1Q96CN9 775 aa10.63□□□□□ -0.71
RPE-207ENST00000435437 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.63□□□□□ -0.71
RPE-207ENST00000435437 KIAA1683Q9H0B3 1180 aa10.63□□□□□ -0.71
RPE-207ENST00000435437 GINM1Q9NU53 330 aa10.63□□□□□ -0.71
RPE-207ENST00000435437 GJD2Q9UKL4 321 aa10.63□□□□□ -0.71
RPE-207ENST00000435437 MYH4Q9Y623 1939 aa10.62□□□□□ -0.71
RPE-207ENST00000435437 IGKV6D-41A0A0C4DH26 115 aa10.62□□□□□ -0.71
RPE-207ENST00000435437 C19orf81C9J6K1 198 aa10.62□□□□□ -0.71
RPE-207ENST00000435437 VCAM1P19320 739 aa10.62□□□□□ -0.71
RPE-207ENST00000435437 NUCB1Q02818 461 aa10.62□□□□□ -0.71
RPE-207ENST00000435437 FAM110CQ1W6H9 321 aa10.62□□□□□ -0.71
RPE-207ENST00000435437 SHISA4Q96DD7 197 aa10.62□□□□□ -0.71
RPE-207ENST00000435437 FAM227BQ96M60 508 aa10.62□□□□□ -0.71
RPE-207ENST00000435437 IL25Q9H293 177 aa10.62□□□□□ -0.71
RPE-207ENST00000435437 AS3MTQ9HBK9 375 aa10.62□□□□□ -0.71
RPE-207ENST00000435437 INCENPQ9NQS7 918 aa10.62□□□□□ -0.71
RPE-207ENST00000435437 PLSCR2Q9NRY7 297 aa10.62□□□□□ -0.71
RPE-207ENST00000435437 KIAA0100Q14667 2235 aaKnown RBP10.61□□□□□ -0.71
RPE-207ENST00000435437 A0A0D9SFI3 127 aa10.61□□□□□ -0.71
RPE-207ENST00000435437 EN2P19622 333 aaPredicted RBP10.61□□□□□ -0.71
RPE-207ENST00000435437 FLT3LGP49771 235 aa10.61□□□□□ -0.71
RPE-207ENST00000435437 HERVK_113P62684 666 aa10.61□□□□□ -0.71
RPE-207ENST00000435437 TRIM32Q13049 653 aa10.61□□□□□ -0.71
RPE-207ENST00000435437 RAB3GAP1Q15042 981 aa10.61□□□□□ -0.71
RPE-207ENST00000435437 B4GALNT3Q6L9W6 998 aa10.61□□□□□ -0.71
RPE-207ENST00000435437 USP17L2Q6R6M4 530 aa10.61□□□□□ -0.71
RPE-207ENST00000435437 CATSPERGQ6ZRH7 1159 aa10.61□□□□□ -0.71
RPE-207ENST00000435437 ZNF589Q86UQ0 364 aaPredicted RBP10.61□□□□□ -0.71
RPE-207ENST00000435437 CHD1LQ86WJ1 897 aa10.61□□□□□ -0.71
RPE-207ENST00000435437 IFNL3Q8IZI9 196 aa10.61□□□□□ -0.71
RPE-207ENST00000435437 PORCNQ9H237 461 aa10.61□□□□□ -0.71
RPE-207ENST00000435437 BTBD7Q9P203 1132 aa10.61□□□□□ -0.71
RPE-207ENST00000435437 MYPNQ86TC9 1320 aa10.6□□□□□ -0.71
RPE-207ENST00000435437 ALPK3Q96L96 1907 aa10.6□□□□□ -0.71
RPE-207ENST00000435437 SPDYE16A6NNV3 312 aaPredicted RBP10.6□□□□□ -0.71
RPE-207ENST00000435437 ZSCAN25Q6NSZ9 544 aa10.6□□□□□ -0.71
RPE-207ENST00000435437 GIMAP6Q6P9H5 292 aa10.6□□□□□ -0.71
RPE-207ENST00000435437 STK11IPQ8N1F8 1099 aa10.6□□□□□ -0.71
RPE-207ENST00000435437 USP6NLQ92738 828 aa10.6□□□□□ -0.71
RPE-207ENST00000435437 NBPF3Q9H094 633 aa10.6□□□□□ -0.71
RPE-207ENST00000435437 OSBPL3Q9H4L5 887 aa10.6□□□□□ -0.71
RPE-207ENST00000435437 SWAP70Q9UH65 585 aa10.6□□□□□ -0.71
RPE-207ENST00000435437 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.6□□□□□ -0.71
RPE-207ENST00000435437 TMX2Q9Y320 296 aa10.6□□□□□ -0.71
RPE-207ENST00000435437 LAMA4Q16363 1823 aa10.59□□□□□ -0.71
RPE-207ENST00000435437 FRMPD3Q5JV73 1810 aa10.59□□□□□ -0.71
RPE-207ENST00000435437 PATL2C9JE40 543 aaKnown RBP10.59□□□□□ -0.71
RPE-207ENST00000435437 ERC2O15083 957 aa10.59□□□□□ -0.71
RPE-207ENST00000435437 FMNL1O95466 1100 aaPredicted RBP10.59□□□□□ -0.71
RPE-207ENST00000435437 IGHA2P01877 340 aa10.59□□□□□ -0.71
RPE-207ENST00000435437 ZFYP08048 801 aaPredicted RBP10.59□□□□□ -0.71
RPE-207ENST00000435437 ELNP15502 786 aa10.59□□□□□ -0.71
RPE-207ENST00000435437 AAMPQ13685 434 aa10.59□□□□□ -0.71
RPE-207ENST00000435437 LHX8Q68G74 356 aa10.59□□□□□ -0.71
RPE-207ENST00000435437 LBX2Q6XYB7 198 aa10.59□□□□□ -0.71
RPE-207ENST00000435437 TMEM179Q6ZVK1 233 aa10.59□□□□□ -0.71
RPE-207ENST00000435437 FSD1Q9BTV5 496 aa10.59□□□□□ -0.71
RPE-207ENST00000435437 TRIM34Q9BYJ4 488 aa10.59□□□□□ -0.71
RPE-207ENST00000435437 RPAP3Q9H6T3 665 aaPredicted RBP10.59□□□□□ -0.71
RPE-207ENST00000435437 ZNFX1Q9P2E3 1918 aaKnown RBP10.58□□□□□ -0.72
RPE-207ENST00000435437 PITPNM1O00562 1244 aa10.58□□□□□ -0.72
RPE-207ENST00000435437 PRDM1O75626 825 aa10.58□□□□□ -0.72
RPE-207ENST00000435437 MYCP01106 439 aaPredicted RBP10.58□□□□□ -0.72
RPE-207ENST00000435437 GNRH1P01148 92 aa10.58□□□□□ -0.72
RPE-207ENST00000435437 EEF2P13639 858 aaKnown RBP10.58□□□□□ -0.72
RPE-207ENST00000435437 GSPT1P15170 499 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms