RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 NEK9Q8TD19 979 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 HNRNPLLQ8WVV9 542 aaKnown RBP8.23□□□□□ -1.09
GARNL3-205ENST00000435213 RABL2AQ9UBK7 228 aaPredicted RBP8.23□□□□□ -1.09
GARNL3-205ENST00000435213 LAMA4Q16363 1823 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 ACEP12821 1306 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 PHLPP2Q6ZVD8 1323 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 PIK3C2AO00443 1686 aa8.23□□□□□ -1.09
GARNL3-205ENST00000435213 RPSAP08865 295 aaKnown RBP8.22□□□□□ -1.09
GARNL3-205ENST00000435213 CSB-PGBD3P0DP91 1061 aa8.22□□□□□ -1.09
GARNL3-205ENST00000435213 RPL13P26373 211 aaKnown RBP8.22□□□□□ -1.09
GARNL3-205ENST00000435213 CUL4BQ13620 913 aa8.22□□□□□ -1.09
GARNL3-205ENST00000435213 PKN1Q16512 942 aa8.22□□□□□ -1.09
GARNL3-205ENST00000435213 HOMER1Q86YM7 354 aa8.22□□□□□ -1.09
GARNL3-205ENST00000435213 GALNT15Q8N3T1 639 aa8.22□□□□□ -1.09
GARNL3-205ENST00000435213 TAF4BQ92750 862 aa8.22□□□□□ -1.09
GARNL3-205ENST00000435213 FAM204AQ9H8W3 233 aa8.22□□□□□ -1.09
GARNL3-205ENST00000435213 TFIP11Q9UBB9 837 aaKnown RBP8.22□□□□□ -1.09
GARNL3-205ENST00000435213 MED23Q9ULK4 1368 aa8.22□□□□□ -1.09
GARNL3-205ENST00000435213 PSDA5PKW4 1024 aaPredicted RBP8.22□□□□□ -1.09
GARNL3-205ENST00000435213 NAT2P11245 290 aa8.22□□□□□ -1.09
GARNL3-205ENST00000435213 PABPC4Q13310 644 aaKnown RBP eCLIP8.22□□□□□ -1.09
GARNL3-205ENST00000435213 GJC2Q5T442 439 aaPredicted RBP8.22□□□□□ -1.09
GARNL3-205ENST00000435213 CCDC73Q6ZRK6 1079 aa8.22□□□□□ -1.09
GARNL3-205ENST00000435213 C11orf57Q6ZUT1 292 aaPredicted RBP8.22□□□□□ -1.09
GARNL3-205ENST00000435213 SYCP3Q8IZU3 236 aa8.22□□□□□ -1.09
GARNL3-205ENST00000435213 SMYD1Q8NB12 490 aa8.22□□□□□ -1.09
GARNL3-205ENST00000435213 OSBPL5Q9H0X9 879 aaPredicted RBP8.22□□□□□ -1.09
GARNL3-205ENST00000435213 ANO10Q9NW15 660 aa8.22□□□□□ -1.09
GARNL3-205ENST00000435213 PAIP2BQ9ULR5 123 aaKnown RBP8.22□□□□□ -1.09
GARNL3-205ENST00000435213 PPME1Q9Y570 386 aa8.22□□□□□ -1.09
GARNL3-205ENST00000435213 MARF1Q9Y4F3 1742 aaKnown RBP8.22□□□□□ -1.09
GARNL3-205ENST00000435213 HOXB7P09629 217 aa8.22□□□□□ -1.09
GARNL3-205ENST00000435213 TOB2Q14106 344 aaPredicted RBP8.22□□□□□ -1.09
GARNL3-205ENST00000435213 TAF7Q15545 349 aaPredicted RBP8.22□□□□□ -1.09
GARNL3-205ENST00000435213 ERMNQ8TAM6 284 aa8.22□□□□□ -1.09
GARNL3-205ENST00000435213 AGBL1Q96MI9 1066 aa8.22□□□□□ -1.09
GARNL3-205ENST00000435213 CARD6Q9BX69 1037 aa8.22□□□□□ -1.09
GARNL3-205ENST00000435213 UBAP1Q9NZ09 502 aa8.22□□□□□ -1.09
GARNL3-205ENST00000435213 PUF60Q9UHX1 559 aaKnown RBP8.22□□□□□ -1.09
GARNL3-205ENST00000435213 ABCC6O95255 1503 aa8.21□□□□□ -1.09
GARNL3-205ENST00000435213 A6NNZ2 444 aa8.21□□□□□ -1.09
GARNL3-205ENST00000435213 BECN2A8MW95 431 aa8.21□□□□□ -1.09
GARNL3-205ENST00000435213 IFIT2P09913 472 aaKnown RBP8.21□□□□□ -1.09
GARNL3-205ENST00000435213 GNAT1P11488 350 aa8.21□□□□□ -1.09
GARNL3-205ENST00000435213 TUBB4BP68371 445 aa8.21□□□□□ -1.09
GARNL3-205ENST00000435213 MECOMQ03112 1051 aa8.21□□□□□ -1.09
GARNL3-205ENST00000435213 TUBB8Q3ZCM7 444 aa8.21□□□□□ -1.09
GARNL3-205ENST00000435213 BEND3Q5T5X7 828 aa8.21□□□□□ -1.09
GARNL3-205ENST00000435213 ATL3Q6DD88 541 aa8.21□□□□□ -1.09
GARNL3-205ENST00000435213 SMARCC1Q92922 1105 aaPredicted RBP8.21□□□□□ -1.09
GARNL3-205ENST00000435213 BRD8Q9H0E9 1235 aa8.21□□□□□ -1.09
GARNL3-205ENST00000435213 SLC39A2Q9NP94 309 aa8.21□□□□□ -1.09
GARNL3-205ENST00000435213 EID1Q9Y6B2 187 aa8.21□□□□□ -1.09
GARNL3-205ENST00000435213 TNRQ92752 1358 aa8.21□□□□□ -1.09
GARNL3-205ENST00000435213 B4DLN1 442 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 MARCH6O60337 910 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 SMIM24O75264 130 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 URI1O94763 535 aaPredicted RBP8.21□□□□□ -1.1
GARNL3-205ENST00000435213 KCNA2P16389 499 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 ABL2P42684 1182 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 ETF1P62495 437 aaKnown RBP8.21□□□□□ -1.1
GARNL3-205ENST00000435213 KRT32Q14532 448 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 ZFYVE27Q5T4F4 411 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 DHX40Q8IX18 779 aaKnown RBP8.21□□□□□ -1.1
GARNL3-205ENST00000435213 CEP57L1Q8IYX8 460 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 LZICQ8WZA0 190 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 DDX12PQ92771 950 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 LUC7LQ9NQ29 371 aaKnown RBP8.21□□□□□ -1.1
GARNL3-205ENST00000435213 EXOC1Q9NV70 894 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 TUBA8Q9NY65 449 aaPredicted RBP8.21□□□□□ -1.1
GARNL3-205ENST00000435213 RTEL1Q9NZ71 1219 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 PNMA2Q9UL42 364 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 MAPK8IP1Q9UQF2 711 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 TRPC6Q9Y210 931 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 MRC1P22897 1456 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 LMO7Q8WWI1 1683 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 MEFVO15553 781 aaPredicted RBP8.21□□□□□ -1.1
GARNL3-205ENST00000435213 SMNDC1O75940 238 aaKnown RBP eCLIP8.21□□□□□ -1.1
GARNL3-205ENST00000435213 PARP1P09874 1014 aaKnown RBP8.21□□□□□ -1.1
GARNL3-205ENST00000435213 NMIQ13287 307 aaPredicted RBP8.21□□□□□ -1.1
GARNL3-205ENST00000435213 ARID5BQ14865 1188 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 MYBPC3Q14896 1274 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 LRRN4CLQ8ND94 238 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 DYDC1Q8WWB3 177 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 EYA1Q99502 592 aa8.21□□□□□ -1.1
GARNL3-205ENST00000435213 LRRC10BA6NIK2 292 aa8.2□□□□□ -1.1
GARNL3-205ENST00000435213 PPP1R12BO60237 982 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-205ENST00000435213 STK10O94804 968 aaKnown RBP8.2□□□□□ -1.1
GARNL3-205ENST00000435213 TUBBP07437 444 aa8.2□□□□□ -1.1
GARNL3-205ENST00000435213 KIF4BQ2VIQ3 1234 aa8.2□□□□□ -1.1
GARNL3-205ENST00000435213 CCDC70Q6NSX1 233 aa8.2□□□□□ -1.1
GARNL3-205ENST00000435213 ANKRD13BQ86YJ7 626 aa8.2□□□□□ -1.1
GARNL3-205ENST00000435213 GOLGA1Q92805 767 aa8.2□□□□□ -1.1
GARNL3-205ENST00000435213 CCDC85AQ96PX6 553 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-205ENST00000435213 PHAXQ9H814 394 aaKnown RBP8.2□□□□□ -1.1
GARNL3-205ENST00000435213 ZNF510Q9Y2H8 683 aa8.2□□□□□ -1.1
GARNL3-205ENST00000435213 RASSF9O75901 435 aa8.2□□□□□ -1.1
GARNL3-205ENST00000435213 BZW1Q7L1Q6 419 aaKnown RBP8.2□□□□□ -1.1
GARNL3-205ENST00000435213 HOOK3Q86VS8 718 aa8.2□□□□□ -1.1
GARNL3-205ENST00000435213 STK11IPQ8N1F8 1099 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms