RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 GLIPR1L2Q4G1C9 344 aa21.31■■□□□ 1
CLK1-205ENST00000434813 NT5DC1Q5TFE4 455 aa21.31■■□□□ 1
CLK1-205ENST00000434813 CCAR2Q8N163 923 aaKnown RBP21.31■■□□□ 1
CLK1-205ENST00000434813 BRWD3Q6RI45 1802 aa21.31■■□□□ 1
CLK1-205ENST00000434813 CCDC88AQ3V6T2 1871 aa21.31■■□□□ 1
CLK1-205ENST00000434813 USP17L12C9JPN9 530 aa21.31■■□□□ 1
CLK1-205ENST00000434813 USP17L21D6R901 530 aa21.31■■□□□ 1
CLK1-205ENST00000434813 PRDM1O75626 825 aa21.31■■□□□ 1
CLK1-205ENST00000434813 ATP1A3P13637 1013 aa21.31■■□□□ 1
CLK1-205ENST00000434813 KCNJ6P48051 423 aa21.31■■□□□ 1
CLK1-205ENST00000434813 POSTNQ15063 836 aa21.31■■□□□ 1
CLK1-205ENST00000434813 SPECC1Q5M775 1068 aa21.31■■□□□ 1
CLK1-205ENST00000434813 ARMCX5Q6P1M9 558 aa21.31■■□□□ 1
CLK1-205ENST00000434813 CRNKL1Q9BZJ0 848 aaKnown RBP21.31■■□□□ 1
CLK1-205ENST00000434813 CABP5Q9NP86 173 aa21.31■■□□□ 1
CLK1-205ENST00000434813 CBFA2T2O43439 604 aa21.3■■□□□ 1
CLK1-205ENST00000434813 SFPQP23246 707 aaKnown RBP eCLIP21.3■■□□□ 1
CLK1-205ENST00000434813 KRT2P35908 639 aa21.3■■□□□ 1
CLK1-205ENST00000434813 CEP135Q66GS9 1140 aa21.3■■□□□ 1
CLK1-205ENST00000434813 TMTC3Q6ZXV5 915 aa21.3■■□□□ 1
CLK1-205ENST00000434813 ILDR2Q71H61 639 aa21.3■■□□□ 1
CLK1-205ENST00000434813 DCP1AQ9NPI6 582 aaPredicted RBP21.3■■□□□ 1
CLK1-205ENST00000434813 VPS54Q9P1Q0 977 aa21.3■■□□□ 1
CLK1-205ENST00000434813 FOXN1O15353 648 aa21.29■■□□□ 1
CLK1-205ENST00000434813 PLEKHA8P1O95397 391 aa21.29■■□□□ 1
CLK1-205ENST00000434813 ATP8A2Q9NTI2 1148 aa21.29■■□□□ 1
CLK1-205ENST00000434813 ARPP21Q9UBL0 812 aaPredicted RBP21.29■■□□□ 1
CLK1-205ENST00000434813 TNRC6CQ9HCJ0 1690 aaKnown RBP21.29■■□□□ 1
CLK1-205ENST00000434813 POLR2DO15514 142 aaKnown RBP21.29■■□□□ 1
CLK1-205ENST00000434813 BMP6P22004 513 aa21.29■■□□□ 1
CLK1-205ENST00000434813 PTPN14Q15678 1187 aa21.29■■□□□ 1
CLK1-205ENST00000434813 CNTNAP5Q8WYK1 1306 aa21.28■■□□□ 1
CLK1-205ENST00000434813 TRIM75PA6NK02 468 aa21.28■■□□□ 1
CLK1-205ENST00000434813 SYCP1Q15431 976 aa21.28■■□□□ 1
CLK1-205ENST00000434813 KANK3Q6NY19 840 aa21.28■■□□□ 1
CLK1-205ENST00000434813 TRIML1Q8N9V2 468 aa21.28■■□□□ 1
CLK1-205ENST00000434813 ANKRD7Q92527 254 aa21.28■■□□□ 1
CLK1-205ENST00000434813 AATFQ9NY61 560 aaKnown RBP eCLIP21.28■■□□□ 1
CLK1-205ENST00000434813 TFCP2L1Q9NZI6 479 aa21.28■■□□□ 1
CLK1-205ENST00000434813 SERTAD1Q9UHV2 236 aa21.28■■□□□ 1
CLK1-205ENST00000434813 MAN1B1Q9UKM7 699 aa21.28■■□□□ 1
CLK1-205ENST00000434813 IRS2Q9Y4H2 1338 aa21.28■■□□□ 1
CLK1-205ENST00000434813 ACTN4O43707 911 aaKnown RBP21.28■■□□□ 1
CLK1-205ENST00000434813 PRDX5P30044 214 aa21.28■■□□□ 1
CLK1-205ENST00000434813 SARSP49591 514 aaKnown RBP21.28■■□□□ 1
CLK1-205ENST00000434813 SBK1Q52WX2 424 aa21.28■■□□□ 1
CLK1-205ENST00000434813 CCDC112Q8NEF3 446 aa21.28■■□□□ 1
CLK1-205ENST00000434813 UBE2Q2Q8WVN8 375 aa21.28■■□□□ 1
CLK1-205ENST00000434813 NRDCO43847 1150 aa21.27■■□□□ 1
CLK1-205ENST00000434813 BMP15O95972 392 aa21.27■■□□□ 1
CLK1-205ENST00000434813 UBASH3AP57075 661 aa21.27■■□□□ 1
CLK1-205ENST00000434813 CSRNP2Q9H175 543 aa21.27■■□□□ 1
CLK1-205ENST00000434813 BRMS1Q9HCU9 246 aa21.27■■□□□ 1
CLK1-205ENST00000434813 DACH1Q9UI36 760 aa21.27■■□□□ 1
CLK1-205ENST00000434813 V9GY48 417 aaPredicted RBP21.27■■□□□ 1
CLK1-205ENST00000434813 FAM205CA6NFA0 338 aa21.26■□□□□ 0.99
CLK1-205ENST00000434813 KIF2AO00139 706 aaPredicted RBP21.26■□□□□ 0.99
CLK1-205ENST00000434813 SERPINC1P01008 464 aa21.26■□□□□ 0.99
CLK1-205ENST00000434813 PRR29P0C7W0 189 aa21.26■□□□□ 0.99
CLK1-205ENST00000434813 PDE4BQ07343 736 aa21.26■□□□□ 0.99
CLK1-205ENST00000434813 NFIXQ14938 502 aa21.26■□□□□ 0.99
CLK1-205ENST00000434813 CCDC24Q8N4L8 307 aa21.26■□□□□ 0.99
CLK1-205ENST00000434813 TNFRSF25Q93038 417 aa21.26■□□□□ 0.99
CLK1-205ENST00000434813 SMARCE1Q969G3 411 aa21.26■□□□□ 0.99
CLK1-205ENST00000434813 PSDA5PKW4 1024 aaPredicted RBP21.26■□□□□ 0.99
CLK1-205ENST00000434813 ATP2B1P20020 1258 aa21.26■□□□□ 0.99
CLK1-205ENST00000434813 MORC3Q14149 939 aa21.26■□□□□ 0.99
CLK1-205ENST00000434813 TXNRD1Q16881 649 aa21.26■□□□□ 0.99
CLK1-205ENST00000434813 CNBD1Q8NA66 436 aa21.26■□□□□ 0.99
CLK1-205ENST00000434813 MLKLQ8NB16 471 aa21.26■□□□□ 0.99
CLK1-205ENST00000434813 CTCFLQ8NI51 663 aaPredicted RBP21.26■□□□□ 0.99
CLK1-205ENST00000434813 SPATA20Q8TB22 786 aa21.26■□□□□ 0.99
CLK1-205ENST00000434813 DPF2Q92785 391 aa21.26■□□□□ 0.99
CLK1-205ENST00000434813 FANCLQ9NW38 375 aa21.26■□□□□ 0.99
CLK1-205ENST00000434813 IGSF3O75054 1194 aa21.25■□□□□ 0.99
CLK1-205ENST00000434813 TM4SF1P30408 202 aa21.25■□□□□ 0.99
CLK1-205ENST00000434813 EVX2Q03828 476 aa21.25■□□□□ 0.99
CLK1-205ENST00000434813 NPY5RQ15761 445 aa21.25■□□□□ 0.99
CLK1-205ENST00000434813 EARS2Q5JPH6 523 aaKnown RBP21.25■□□□□ 0.99
CLK1-205ENST00000434813 E4F1Q66K89 784 aaPredicted RBP21.25■□□□□ 0.99
CLK1-205ENST00000434813 hCG_1642624A0A1W2PR95 340 aa21.24■□□□□ 0.99
CLK1-205ENST00000434813 NT5C2P49902 561 aa21.24■□□□□ 0.99
CLK1-205ENST00000434813 CFAP100Q494V2 611 aa21.24■□□□□ 0.99
CLK1-205ENST00000434813 VSTM4Q8IW00 320 aa21.24■□□□□ 0.99
CLK1-205ENST00000434813 SPTY2D1Q68D10 685 aaPredicted RBP21.24■□□□□ 0.99
CLK1-205ENST00000434813 USP49Q70CQ1 688 aa21.24■□□□□ 0.99
CLK1-205ENST00000434813 FERMT2Q96AC1 680 aa21.24■□□□□ 0.99
CLK1-205ENST00000434813 TRMT1Q9NXH9 659 aaKnown RBP21.24■□□□□ 0.99
CLK1-205ENST00000434813 SRBD1Q8N5C6 995 aaKnown RBP21.23■□□□□ 0.99
CLK1-205ENST00000434813 ENOX1Q8TC92 643 aaKnown RBP21.23■□□□□ 0.99
CLK1-205ENST00000434813 ZNF592Q92610 1267 aa21.23■□□□□ 0.99
CLK1-205ENST00000434813 CCDC34Q96HJ3 373 aa21.23■□□□□ 0.99
CLK1-205ENST00000434813 NMT2O60551 498 aa21.22■□□□□ 0.99
CLK1-205ENST00000434813 CYP2D6P10635 497 aa21.22■□□□□ 0.99
CLK1-205ENST00000434813 GYS1P13807 737 aa21.22■□□□□ 0.99
CLK1-205ENST00000434813 NCBP1Q09161 790 aaKnown RBP21.22■□□□□ 0.99
CLK1-205ENST00000434813 TXNRD3Q86VQ6 643 aa21.22■□□□□ 0.99
CLK1-205ENST00000434813 PDILTQ8N807 584 aa21.22■□□□□ 0.99
CLK1-205ENST00000434813 PPP1R13BQ96KQ4 1090 aa21.22■□□□□ 0.99
CLK1-205ENST00000434813 UBR3Q6ZT12 1888 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms