RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 NPHP1O15259 732 aa19.03■□□□□ 0.64
CHFR-203ENST00000432561 ACTN4O43707 911 aaKnown RBP19.03■□□□□ 0.64
CHFR-203ENST00000432561 KRT2P35908 639 aa19.03■□□□□ 0.64
CHFR-203ENST00000432561 ANKRD7Q92527 254 aa19.03■□□□□ 0.64
CHFR-203ENST00000432561 NGLY1Q96IV0 654 aa19.03■□□□□ 0.64
CHFR-203ENST00000432561 PPP1R13BQ96KQ4 1090 aa19.03■□□□□ 0.64
CHFR-203ENST00000432561 TRIM75PA6NK02 468 aa19.03■□□□□ 0.64
CHFR-203ENST00000432561 STAMQ92783 540 aa19.03■□□□□ 0.64
CHFR-203ENST00000432561 MED15Q96RN5 788 aa19.03■□□□□ 0.64
CHFR-203ENST00000432561 NARFQ9UHQ1 456 aa19.03■□□□□ 0.64
CHFR-203ENST00000432561 LTBP4Q8N2S1 1624 aa19.02■□□□□ 0.64
CHFR-203ENST00000432561 ZPR1O75312 459 aa19.02■□□□□ 0.64
CHFR-203ENST00000432561 USP17L8P0C7I0 530 aa19.02■□□□□ 0.64
CHFR-203ENST00000432561 RCAN1P53805 252 aa19.02■□□□□ 0.64
CHFR-203ENST00000432561 NPY5RQ15761 445 aa19.02■□□□□ 0.64
CHFR-203ENST00000432561 SLC10A5Q5PT55 438 aa19.02■□□□□ 0.64
CHFR-203ENST00000432561 SMARCE1Q969G3 411 aa19.02■□□□□ 0.64
CHFR-203ENST00000432561 NFE2L3Q9Y4A8 694 aa19.02■□□□□ 0.64
CHFR-203ENST00000432561 PRPF3O43395 683 aaKnown RBP19.02■□□□□ 0.63
CHFR-203ENST00000432561 CCDC94Q9BW85 323 aaPredicted RBP19.02■□□□□ 0.63
CHFR-203ENST00000432561 ZNF215Q9UL58 517 aaPredicted RBP19.02■□□□□ 0.63
CHFR-203ENST00000432561 MTMR7Q9Y216 660 aa19.02■□□□□ 0.63
CHFR-203ENST00000432561 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.02■□□□□ 0.63
CHFR-203ENST00000432561 CNTNAP4Q9C0A0 1308 aa19.01■□□□□ 0.63
CHFR-203ENST00000432561 SPDYE4A6NLX3 237 aa19.01■□□□□ 0.63
CHFR-203ENST00000432561 TMTC3Q6ZXV5 915 aa19.01■□□□□ 0.63
CHFR-203ENST00000432561 CNTNAP5Q8WYK1 1306 aa19.01■□□□□ 0.63
CHFR-203ENST00000432561 XBP1P17861 261 aa19.01■□□□□ 0.63
CHFR-203ENST00000432561 SYMPKQ92797 1274 aaKnown RBP19.01■□□□□ 0.63
CHFR-203ENST00000432561 CRNKL1Q9BZJ0 848 aaKnown RBP19.01■□□□□ 0.63
CHFR-203ENST00000432561 SAMSN1Q9NSI8 373 aaKnown RBP19.01■□□□□ 0.63
CHFR-203ENST00000432561 MCM9Q9NXL9 1143 aa19.01■□□□□ 0.63
CHFR-203ENST00000432561 GRIK5Q16478 980 aa19■□□□□ 0.63
CHFR-203ENST00000432561 SMYD4Q8IYR2 804 aaPredicted RBP19■□□□□ 0.63
CHFR-203ENST00000432561 CEP131Q9UPN4 1083 aa19■□□□□ 0.63
CHFR-203ENST00000432561 TSPY2A6NKD2 308 aa19■□□□□ 0.63
CHFR-203ENST00000432561 FGRP09769 529 aa19■□□□□ 0.63
CHFR-203ENST00000432561 SARSP49591 514 aaKnown RBP19■□□□□ 0.63
CHFR-203ENST00000432561 CBX1P83916 185 aa19■□□□□ 0.63
CHFR-203ENST00000432561 MORC3Q14149 939 aa19■□□□□ 0.63
CHFR-203ENST00000432561 KLHL10Q6JEL2 608 aa19■□□□□ 0.63
CHFR-203ENST00000432561 SYT10Q6XYQ8 523 aa19■□□□□ 0.63
CHFR-203ENST00000432561 VSTM4Q8IW00 320 aa19■□□□□ 0.63
CHFR-203ENST00000432561 ARHGEF1Q92888 912 aaKnown RBP19■□□□□ 0.63
CHFR-203ENST00000432561 DYNLL2Q96FJ2 89 aa19■□□□□ 0.63
CHFR-203ENST00000432561 VWA3AA6NCI4 1184 aa18.99■□□□□ 0.63
CHFR-203ENST00000432561 COBLO75128 1261 aa18.99■□□□□ 0.63
CHFR-203ENST00000432561 RPS6KA4O75676 772 aa18.99■□□□□ 0.63
CHFR-203ENST00000432561 TOP1P11387 765 aaKnown RBP18.99■□□□□ 0.63
CHFR-203ENST00000432561 TM4SF1P30408 202 aa18.99■□□□□ 0.63
CHFR-203ENST00000432561 DIXDC1Q155Q3 683 aa18.99■□□□□ 0.63
CHFR-203ENST00000432561 ZNF579Q8NAF0 562 aaKnown RBP18.99■□□□□ 0.63
CHFR-203ENST00000432561 CTCFLQ8NI51 663 aaPredicted RBP18.99■□□□□ 0.63
CHFR-203ENST00000432561 PRDM10Q9NQV6 1147 aa18.99■□□□□ 0.63
CHFR-203ENST00000432561 HOOK1Q9UJC3 728 aaKnown RBP18.99■□□□□ 0.63
CHFR-203ENST00000432561 CCNL1Q9UK58 526 aaPredicted RBP18.99■□□□□ 0.63
CHFR-203ENST00000432561 CCDC88AQ3V6T2 1871 aa18.99■□□□□ 0.63
CHFR-203ENST00000432561 DLEC1Q9Y238 1755 aa18.99■□□□□ 0.63
CHFR-203ENST00000432561 CDK11BP21127 795 aaKnown RBP18.99■□□□□ 0.63
CHFR-203ENST00000432561 STX17P56962 302 aa18.99■□□□□ 0.63
CHFR-203ENST00000432561 TPTE2Q6XPS3 522 aa18.99■□□□□ 0.63
CHFR-203ENST00000432561 PIK3AP1Q6ZUJ8 805 aa18.99■□□□□ 0.63
CHFR-203ENST00000432561 DZIP1Q86YF9 867 aaKnown RBP18.99■□□□□ 0.63
CHFR-203ENST00000432561 NYXQ9GZU5 481 aa18.99■□□□□ 0.63
CHFR-203ENST00000432561 NFIXQ14938 502 aa18.98■□□□□ 0.63
CHFR-203ENST00000432561 RBM28Q9NW13 759 aaKnown RBP18.98■□□□□ 0.63
CHFR-203ENST00000432561 ANKIB1Q9P2G1 1089 aa18.98■□□□□ 0.63
CHFR-203ENST00000432561 PTGDRQ13258 359 aa18.98■□□□□ 0.63
CHFR-203ENST00000432561 NT5DC1Q5TFE4 455 aa18.98■□□□□ 0.63
CHFR-203ENST00000432561 KIF18AQ8NI77 898 aa18.98■□□□□ 0.63
CHFR-203ENST00000432561 TNFRSF25Q93038 417 aa18.98■□□□□ 0.63
CHFR-203ENST00000432561 BTAF1O14981 1849 aa18.98■□□□□ 0.63
CHFR-203ENST00000432561 TNRC6CQ9HCJ0 1690 aaKnown RBP18.97■□□□□ 0.63
CHFR-203ENST00000432561 LAMB1P07942 1786 aa18.97■□□□□ 0.63
CHFR-203ENST00000432561 CBFA2T2O43439 604 aa18.97■□□□□ 0.63
CHFR-203ENST00000432561 PPP2R5BQ15173 497 aa18.97■□□□□ 0.63
CHFR-203ENST00000432561 TTC38Q5R3I4 469 aa18.97■□□□□ 0.63
CHFR-203ENST00000432561 RCSD1Q6JBY9 416 aa18.97■□□□□ 0.63
CHFR-203ENST00000432561 LRRN4CLQ8ND94 238 aa18.97■□□□□ 0.63
CHFR-203ENST00000432561 GPKOWQ92917 476 aaPredicted RBP eCLIP18.97■□□□□ 0.63
CHFR-203ENST00000432561 SEMA3EO15041 775 aa18.97■□□□□ 0.63
CHFR-203ENST00000432561 DDAH1O94760 285 aa18.97■□□□□ 0.63
CHFR-203ENST00000432561 CD44P16070 742 aaKnown RBP18.97■□□□□ 0.63
CHFR-203ENST00000432561 RTCBQ9Y3I0 505 aaKnown RBP18.97■□□□□ 0.63
CHFR-203ENST00000432561 KIAA1551Q9HCM1 1747 aa18.96■□□□□ 0.63
CHFR-203ENST00000432561 ORC4O43929 436 aa18.96■□□□□ 0.63
CHFR-203ENST00000432561 CDC25AP30304 524 aa18.96■□□□□ 0.63
CHFR-203ENST00000432561 MCM7P33993 719 aa18.96■□□□□ 0.63
CHFR-203ENST00000432561 ADKP55263 362 aaKnown RBP18.96■□□□□ 0.63
CHFR-203ENST00000432561 NLRP5P59047 1200 aa18.96■□□□□ 0.63
CHFR-203ENST00000432561 RASGRP2Q7LDG7 609 aa18.96■□□□□ 0.63
CHFR-203ENST00000432561 STAG2Q8N3U4 1231 aa18.96■□□□□ 0.63
CHFR-203ENST00000432561 SLC44A5Q8NCS7 719 aa18.96■□□□□ 0.63
CHFR-203ENST00000432561 RASGRP4Q8TDF6 673 aa18.96■□□□□ 0.63
CHFR-203ENST00000432561 ANKRD2Q9GZV1 360 aa18.96■□□□□ 0.63
CHFR-203ENST00000432561 CALM1P0DP23 149 aa18.96■□□□□ 0.63
CHFR-203ENST00000432561 CALM2P0DP24 149 aa18.96■□□□□ 0.63
CHFR-203ENST00000432561 CALM3P0DP25 149 aa18.96■□□□□ 0.63
CHFR-203ENST00000432561 TFAP4Q01664 338 aa18.96■□□□□ 0.63
CHFR-203ENST00000432561 HOMER1Q86YM7 354 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms